| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522545
Identifier: 42522545
GI number: 42522545
Start: 928871
End: 929380
Strand: Direct
Name: 42522545
Synonym: Bd0983
Alternate gene names: NA
Gene position: 928871-929380 (Clockwise)
Preceding gene: 42522544
Following gene: 42522549
Centisome position: 24.55
GC content: 51.57
Gene sequence:
>510_bases ATGAAAACAATCTTGCTGGCGGCCCTGCTTTCTCTTTCTTTTGCGGCGCCAACCTTTGCCAATATCTCTGACAATTCCCA GGACGTGGTTTCTGCTAAAAAAGGAAAAGGCAAATCCGAGCCGGCTCCGAAAGAAGACGACGGTGGTCGTGGTGAAGAAA AAGACCCTCGTGAAGAAACCTATGAAGGCAATGACCGTGACAGTGGTGGTTCTTTTGATGGCGGCGGTTACGGCAGCGGC GGATTCGATGGCGGCGGCTATGGCGGTGGTGACGGCGGCGGCATGATCGGTGAGATCTTCTCTGTTCCGGGCAAAGGCAA AACCTATCCAGTGACTTCCAACACCACAGTGGAAGATCGTGGCGATGTTCTGGTTTACACAACCCGCACTCAGGAAGACA TCAGCTATGATGAAACCTGCACAACGATTTCTGTTTTGGTTGTGGCGAAATCCACAGGCAAAGTGATCTCTTCTGACAGC AACGAATATTGCAATCGCTGGCCGATGTAG
Upstream 100 bases:
>100_bases CTGAACAATCGTGAAAATATGGCAAGGGTGGTGACGGGGAATGGTCCTGTCGCCGCCCTTGTGTTAAAGACTTCGCTTTG AATACAAAAGGAGTCTTCAT
Downstream 100 bases:
>100_bases TTTCGACTTTCACATTGTTTAAAAAGCAAAAGAGCTGACCCTAAAAAGTCAGCTCTTTCTATTTGCAGTGGCCAGTCCCG CCTAGCTGGCTTCAGAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKTILLAALLSLSFAAPTFANISDNSQDVVSAKKGKGKSEPAPKEDDGGRGEEKDPREETYEGNDRDSGGSFDGGGYGSG GFDGGGYGGGDGGGMIGEIFSVPGKGKTYPVTSNTTVEDRGDVLVYTTRTQEDISYDETCTTISVLVVAKSTGKVISSDS NEYCNRWPM
Sequences:
>Translated_169_residues MKTILLAALLSLSFAAPTFANISDNSQDVVSAKKGKGKSEPAPKEDDGGRGEEKDPREETYEGNDRDSGGSFDGGGYGSG GFDGGGYGGGDGGGMIGEIFSVPGKGKTYPVTSNTTVEDRGDVLVYTTRTQEDISYDETCTTISVLVVAKSTGKVISSDS NEYCNRWPM >Mature_169_residues MKTILLAALLSLSFAAPTFANISDNSQDVVSAKKGKGKSEPAPKEDDGGRGEEKDPREETYEGNDRDSGGSFDGGGYGSG GFDGGGYGGGDGGGMIGEIFSVPGKGKTYPVTSNTTVEDRGDVLVYTTRTQEDISYDETCTTISVLVVAKSTGKVISSDS NEYCNRWPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17662; Mature: 17662
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTILLAALLSLSFAAPTFANISDNSQDVVSAKKGKGKSEPAPKEDDGGRGEEKDPREET CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YEGNDRDSGGSFDGGGYGSGGFDGGGYGGGDGGGMIGEIFSVPGKGKTYPVTSNTTVEDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCEEECCCCCCCCCC GDVLVYTTRTQEDISYDETCTTISVLVVAKSTGKVISSDSNEYCNRWPM CCEEEEEECCCCCCCCCCHHCEEEEEEEECCCCCEEECCCCHHHHCCCC >Mature Secondary Structure MKTILLAALLSLSFAAPTFANISDNSQDVVSAKKGKGKSEPAPKEDDGGRGEEKDPREET CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YEGNDRDSGGSFDGGGYGSGGFDGGGYGGGDGGGMIGEIFSVPGKGKTYPVTSNTTVEDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCEEECCCCCCCCCC GDVLVYTTRTQEDISYDETCTTISVLVVAKSTGKVISSDSNEYCNRWPM CCEEEEEECCCCCCCCCCHHCEEEEEEEECCCCCEEECCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA