| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is 42522509
Identifier: 42522509
GI number: 42522509
Start: 891169
End: 891522
Strand: Direct
Name: 42522509
Synonym: Bd0942
Alternate gene names: NA
Gene position: 891169-891522 (Clockwise)
Preceding gene: 42522508
Following gene: 42522510
Centisome position: 23.56
GC content: 45.48
Gene sequence:
>354_bases TTGAAACAGGACCAAATCTCTAAAGCAAAAAACATAAAAGCACTGTTGTCGGCGACGATCACGGTGCTTTTTTTTTCGTC CTTCAGTCACGCGGCTGAGCTAGGGGAGTCTCTTGTTCTGTGCAAGCATAACAAGACGGTTCGTACATTGCGTGTTGAAA TCGGTACTGATCAAATCTGCCGCGCGATCTACACGAAGCAAGGTGTGGATGAAACCATTGGCTCTGGTCAGAATCATCAG TCCTGTCATGACTTCGTAACCAATGTCAGAAAAAATCTGGAAGAAGCCAAATGGAGCTGCCGCGAAGTGAAAGAAGCACG CACTTCCAATGTTCTGATTAACAGCGAAGATTAA
Upstream 100 bases:
>100_bases AAGGCGATCTCTTCGTTTTAGTCTCTTACATAGCTGCGTAAAATCTAAGTTGGGTTTAGAAACATTAATTTCGCCCCACT TGTTAAAAGAGGAGAGCAGC
Downstream 100 bases:
>100_bases GAGGTTCCTGATGAGTTCAGAGTTGGTTGTCGCAGCAGTGCAAATGACTTCGGTCGATGATGTAACTACCAACTTGGCTC AGATGGAGGAACTCTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKQDQISKAKNIKALLSATITVLFFSSFSHAAELGESLVLCKHNKTVRTLRVEIGTDQICRAIYTKQGVDETIGSGQNHQ SCHDFVTNVRKNLEEAKWSCREVKEARTSNVLINSED
Sequences:
>Translated_117_residues MKQDQISKAKNIKALLSATITVLFFSSFSHAAELGESLVLCKHNKTVRTLRVEIGTDQICRAIYTKQGVDETIGSGQNHQ SCHDFVTNVRKNLEEAKWSCREVKEARTSNVLINSED >Mature_117_residues MKQDQISKAKNIKALLSATITVLFFSSFSHAAELGESLVLCKHNKTVRTLRVEIGTDQICRAIYTKQGVDETIGSGQNHQ SCHDFVTNVRKNLEEAKWSCREVKEARTSNVLINSED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13110; Mature: 13110
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDQISKAKNIKALLSATITVLFFSSFSHAAELGESLVLCKHNKTVRTLRVEIGTDQIC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCHHHHH RAIYTKQGVDETIGSGQNHQSCHDFVTNVRKNLEEAKWSCREVKEARTSNVLINSED HHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC >Mature Secondary Structure MKQDQISKAKNIKALLSATITVLFFSSFSHAAELGESLVLCKHNKTVRTLRVEIGTDQIC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCHHHHH RAIYTKQGVDETIGSGQNHQSCHDFVTNVRKNLEEAKWSCREVKEARTSNVLINSED HHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA