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The map label for this gene is rplX

Identifier: 42522508

GI number: 42522508

Start: 890715

End: 890975

Strand: Direct

Name: rplX

Synonym: Bd0941

Alternate gene names: 42522508

Gene position: 890715-890975 (Clockwise)

Preceding gene: 42522506

Following gene: 42522509

Centisome position: 23.55

GC content: 40.23

Gene sequence:

>261_bases
ATGAAATTGAAAATCAAAAAAGGCGCGACAGTACAAGTTATCACAGGCTCTGACAAAGGTAAGAAGGGCACTGTTATCGC
TGTAGACGCTAACGCTATGAAAATCCAAGTTCAAGGTGTGAAAGTACAAACACACTACGACAAAAAAGACGGTCTTTTGA
AAAAAGAAGGCTTCATCGACTACTCCAACGTGAAGTTGGTTGAAGCTGCTTCTAAAGAGAAGAAGACTTCTAAAAAGGCT
ACTAAGTCTAAGTCCGCTTAG

Upstream 100 bases:

>100_bases
CCTTAATCAAGACGACTCCAAGCTTTCTAAAAGAGCTTTGACCGTTAAGATGAGAATCAAAAAGAAAATTTCTTCTAAGA
ACTAATTAAGGTTGGCCACA

Downstream 100 bases:

>100_bases
TCTTAAAGTCCGGTTCCGTCCACACTCCGGCTTCGCCGGAGTAAAGGTCAACCGGGCAAAGTTTGCCTAAGACAAAGTCT
AAATTTGGTCCTTAAGGCGA

Product: 50S ribosomal protein L24

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKLKIKKGATVQVITGSDKGKKGTVIAVDANAMKIQVQGVKVQTHYDKKDGLLKKEGFIDYSNVKLVEAASKEKKTSKKA
TKSKSA

Sequences:

>Translated_86_residues
MKLKIKKGATVQVITGSDKGKKGTVIAVDANAMKIQVQGVKVQTHYDKKDGLLKKEGFIDYSNVKLVEAASKEKKTSKKA
TKSKSA
>Mature_86_residues
MKLKIKKGATVQVITGSDKGKKGTVIAVDANAMKIQVQGVKVQTHYDKKDGLLKKEGFIDYSNVKLVEAASKEKKTSKKA
TKSKSA

Specific function: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_BDEBA (Q6MPB7)

Other databases:

- EMBL:   BX842648
- RefSeq:   NP_967888.1
- ProteinModelPortal:   Q6MPB7
- SMR:   Q6MPB7
- GeneID:   2734606
- GenomeReviews:   BX842601_GR
- KEGG:   bba:Bd0941
- NMPDR:   fig|264462.1.peg.858
- HOGENOM:   HBG588578
- OMA:   ESFIHIS
- BioCyc:   BBAC264462:BD0941-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01326_B
- InterPro:   IPR005824
- InterPro:   IPR003256
- InterPro:   IPR014723
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR12903
- SMART:   SM00739

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 9294; Mature: 9294

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKIKKGATVQVITGSDKGKKGTVIAVDANAMKIQVQGVKVQTHYDKKDGLLKKEGFID
CEEEECCCCEEEEEECCCCCCCCCEEEEECCEEEEEEEEEEEEEECCCCCCCCCCCCCEE
YSNVKLVEAASKEKKTSKKATKSKSA
CCCEEEEECCCCCHHCCHHCCCCCCC
>Mature Secondary Structure
MKLKIKKGATVQVITGSDKGKKGTVIAVDANAMKIQVQGVKVQTHYDKKDGLLKKEGFID
CEEEECCCCEEEEEECCCCCCCCCEEEEECCEEEEEEEEEEEEEECCCCCCCCCCCCCEE
YSNVKLVEAASKEKKTSKKATKSKSA
CCCEEEEECCCCCHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA