| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522504
Identifier: 42522504
GI number: 42522504
Start: 888469
End: 889131
Strand: Direct
Name: 42522504
Synonym: Bd0937
Alternate gene names: NA
Gene position: 888469-889131 (Clockwise)
Preceding gene: 42522500
Following gene: 42522506
Centisome position: 23.49
GC content: 52.64
Gene sequence:
>663_bases ATGGAAAACTTTCTGAACTCTTTGCCGAAGCCTGTTCTTGCCATTTTGGTCCTGGTGGTTGCCATCATTGCCTTCATGAT CATGAGCCCGCCTCATTCAGTTTGTGACACCCAGGCTGAAGCTTTCAAGGAGTTGCAAAAAGGCAACATCTTCCCCACTG ACTACAAGAAATCGAAGATTCCGCCGACCATCGTGCGCGCCAAAGAGGCCTGTCAGCTGGGGAACAGTGCGGGGTCCTGC TATGAGTACTTCACGATCCTGCGCGAGGTGGCCGACGCCGTCGGTAAGTCCTCGGCCGAATGTACCTCCCAGTTGTATGG GATTAATGAAGTTCGTTCCAACTTGAATGATGGGATTGAATTGATGGCGCGTTTGGCCTGGGGAACCAAGCCTCCGGAAA TGGGGCTTGAGCGTTTTGGATGGATGCAAGATGCCGAGATCGCGATCTTCTGTCGTTTGAAGAACATCTATACTCGGGCT AACGGGGAAGAGGCGTGGACGAACTTCCGCAAAAAAGTTTATGAAAAATTCCCGGGCGAAGAACTGCCGCCTTCCGCTGA TCCGGCTCTGGTGGCTGTCGAGCCTCGCAAGGCCACGCAAGTTCTTTCAGAGCAGGACATCTGGAATCGCAGTTTGTTCT CGGTCCGTTGCGAGGTCTATTAA
Upstream 100 bases:
>100_bases AGACTGCGCTACTCCCCGACAGAGAAAGAAAACTACATAATCCCTAGGCCTCTTGTCAAACTACTAGATTCTAACGCGTA ATATTAGTACCCTTTTTTTC
Downstream 100 bases:
>100_bases AGCGACACCACCTCCAGGGATTTCCAGCGAGGTTTTTTGTCGCGGTATTCAAGTCGTCCATACATAGCGAACTTTTCGTC CTGGGTGTTCTGAAGCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MENFLNSLPKPVLAILVLVVAIIAFMIMSPPHSVCDTQAEAFKELQKGNIFPTDYKKSKIPPTIVRAKEACQLGNSAGSC YEYFTILREVADAVGKSSAECTSQLYGINEVRSNLNDGIELMARLAWGTKPPEMGLERFGWMQDAEIAIFCRLKNIYTRA NGEEAWTNFRKKVYEKFPGEELPPSADPALVAVEPRKATQVLSEQDIWNRSLFSVRCEVY
Sequences:
>Translated_220_residues MENFLNSLPKPVLAILVLVVAIIAFMIMSPPHSVCDTQAEAFKELQKGNIFPTDYKKSKIPPTIVRAKEACQLGNSAGSC YEYFTILREVADAVGKSSAECTSQLYGINEVRSNLNDGIELMARLAWGTKPPEMGLERFGWMQDAEIAIFCRLKNIYTRA NGEEAWTNFRKKVYEKFPGEELPPSADPALVAVEPRKATQVLSEQDIWNRSLFSVRCEVY >Mature_220_residues MENFLNSLPKPVLAILVLVVAIIAFMIMSPPHSVCDTQAEAFKELQKGNIFPTDYKKSKIPPTIVRAKEACQLGNSAGSC YEYFTILREVADAVGKSSAECTSQLYGINEVRSNLNDGIELMARLAWGTKPPEMGLERFGWMQDAEIAIFCRLKNIYTRA NGEEAWTNFRKKVYEKFPGEELPPSADPALVAVEPRKATQVLSEQDIWNRSLFSVRCEVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24690; Mature: 24690
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFLNSLPKPVLAILVLVVAIIAFMIMSPPHSVCDTQAEAFKELQKGNIFPTDYKKSKI CCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PPTIVRAKEACQLGNSAGSCYEYFTILREVADAVGKSSAECTSQLYGINEVRSNLNDGIE CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LMARLAWGTKPPEMGLERFGWMQDAEIAIFCRLKNIYTRANGEEAWTNFRKKVYEKFPGE HHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCC ELPPSADPALVAVEPRKATQVLSEQDIWNRSLFSVRCEVY CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MENFLNSLPKPVLAILVLVVAIIAFMIMSPPHSVCDTQAEAFKELQKGNIFPTDYKKSKI CCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PPTIVRAKEACQLGNSAGSCYEYFTILREVADAVGKSSAECTSQLYGINEVRSNLNDGIE CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LMARLAWGTKPPEMGLERFGWMQDAEIAIFCRLKNIYTRANGEEAWTNFRKKVYEKFPGE HHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCC ELPPSADPALVAVEPRKATQVLSEQDIWNRSLFSVRCEVY CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA