| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522482
Identifier: 42522482
GI number: 42522482
Start: 863186
End: 864424
Strand: Direct
Name: 42522482
Synonym: Bd0912
Alternate gene names: NA
Gene position: 863186-864424 (Clockwise)
Preceding gene: 42522481
Following gene: 42522485
Centisome position: 22.82
GC content: 50.61
Gene sequence:
>1239_bases GTGGTAAAGGGATTGCCTCTTATGCATCATGATGTTTCTCTGACGGATGACCAAAATATACGCAAAGATCTGTTCTTTGC CTCGTCGAACCTGCTTAAGAAAATCCGTCAGCTTGAAAAAGACCACACGGACTTTCTGCTCTGGGATCAAATCCTGTATC AAGACTGGTACAATCTGACGTTCCGAGACGAGCTTCAAGCCGGTGAACTGCTTGAAAAACGTCATAAGGTGCTGACCACC TTCCAAGTGCATTTGAAATACGTCGCCAACACCTCGAACGTTCCTTTGGAGCGTGCCTACTGCATGTTGAAAGAGGAAGA AAGCCAGTACCAGGCGGGTGATGATGTGTGGAAGTTTGTTATCGACAAACTGAGAAAGAATCGCTTCGACACCGCGACCA GAAGTTCCGCTGTCGCCGGGGAGCCACTGCCGATCCCTGAAGATGGACCGGCCATCAACTTTGCTGAAATTTTCTTTAAG GACGATTCTGCGCTGAGCGGTCTTAGACGTCGTGCGCGCTCAGTGTATCACTATCTGAATGATATTGACGATGGCATGAT GGCCCGTCACTTGTCCGTTCCGATGGCGGGATATCAGTTGTTTAAAGAGACGTTCCAGATTGCCATGAAGTGCGGGGATT GGAAGCTATTGGGTCGTTTGTGGAAAGCAGCCGATCCCGCCTATCAGCAAAGATACCTGCGCAATATGCCGGTGCATTTA AAAGACTTCCTTCAGCAGATCATTGCCGAAAATGCCAGTGAAGAAGCCCTGGAAAAAGAGCAGGCCGAGGCTGAAAGTCT GCTTCGCACCACCTATCGTAAACTGGCGCGCCTGCTTCATCCGGATAAGCAGATCGGTGTTTCGAAAGAACATCAGGATT GGGCTTCCATCAAATGGCAGCGTGTGCAGGCGGCATACAAAGCCCAGGACCACGATGCGTTGAAACGCATCGAGCTGTTA TGCATGGCCGAGCTGGGCCAGCTTAATGATTTGACCACCGATGAAATCTATCAAAGCTCGCTGGTGTTGAATGAAGAGTA CGAAGCGCTCAAGAGGAATCTGAAGGCCTGTCGCAAGCACCCGGCGTGGAAGTTTTCCAGCCGTCGCAGCTATGAGACAC TTAAAAAACAAGCCCGTCTGGAGCTGGAAAAGCGCTTTGGCCCTTTGGAGGCCGAAGTGCACATGCTGGAAAGCCTGCTG AAAATGCTTTCGGCGGCAGAGAAGCAGGCCGTTCATTAG
Upstream 100 bases:
>100_bases TTCAAGCTGGCTTCGTCCGCGTTTGGACTGATTGGTTTTTCAGCAGCACTGCCGATAGATTTGGCAGTTCCGTGTTTTTA TTAGCGATGACATCGGAGGC
Downstream 100 bases:
>100_bases TCCGCTGTGGCGGGCCTACTTCGTTTTACCCAAAGTCATGAATAAAACCATATTTCTGCGGTTGAAGTCGCGGAAGGCGC AGATGCGGCTGGAGCGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MVKGLPLMHHDVSLTDDQNIRKDLFFASSNLLKKIRQLEKDHTDFLLWDQILYQDWYNLTFRDELQAGELLEKRHKVLTT FQVHLKYVANTSNVPLERAYCMLKEEESQYQAGDDVWKFVIDKLRKNRFDTATRSSAVAGEPLPIPEDGPAINFAEIFFK DDSALSGLRRRARSVYHYLNDIDDGMMARHLSVPMAGYQLFKETFQIAMKCGDWKLLGRLWKAADPAYQQRYLRNMPVHL KDFLQQIIAENASEEALEKEQAEAESLLRTTYRKLARLLHPDKQIGVSKEHQDWASIKWQRVQAAYKAQDHDALKRIELL CMAELGQLNDLTTDEIYQSSLVLNEEYEALKRNLKACRKHPAWKFSSRRSYETLKKQARLELEKRFGPLEAEVHMLESLL KMLSAAEKQAVH
Sequences:
>Translated_412_residues MVKGLPLMHHDVSLTDDQNIRKDLFFASSNLLKKIRQLEKDHTDFLLWDQILYQDWYNLTFRDELQAGELLEKRHKVLTT FQVHLKYVANTSNVPLERAYCMLKEEESQYQAGDDVWKFVIDKLRKNRFDTATRSSAVAGEPLPIPEDGPAINFAEIFFK DDSALSGLRRRARSVYHYLNDIDDGMMARHLSVPMAGYQLFKETFQIAMKCGDWKLLGRLWKAADPAYQQRYLRNMPVHL KDFLQQIIAENASEEALEKEQAEAESLLRTTYRKLARLLHPDKQIGVSKEHQDWASIKWQRVQAAYKAQDHDALKRIELL CMAELGQLNDLTTDEIYQSSLVLNEEYEALKRNLKACRKHPAWKFSSRRSYETLKKQARLELEKRFGPLEAEVHMLESLL KMLSAAEKQAVH >Mature_412_residues MVKGLPLMHHDVSLTDDQNIRKDLFFASSNLLKKIRQLEKDHTDFLLWDQILYQDWYNLTFRDELQAGELLEKRHKVLTT FQVHLKYVANTSNVPLERAYCMLKEEESQYQAGDDVWKFVIDKLRKNRFDTATRSSAVAGEPLPIPEDGPAINFAEIFFK DDSALSGLRRRARSVYHYLNDIDDGMMARHLSVPMAGYQLFKETFQIAMKCGDWKLLGRLWKAADPAYQQRYLRNMPVHL KDFLQQIIAENASEEALEKEQAEAESLLRTTYRKLARLLHPDKQIGVSKEHQDWASIKWQRVQAAYKAQDHDALKRIELL CMAELGQLNDLTTDEIYQSSLVLNEEYEALKRNLKACRKHPAWKFSSRRSYETLKKQARLELEKRFGPLEAEVHMLESLL KMLSAAEKQAVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48102; Mature: 48102
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKGLPLMHHDVSLTDDQNIRKDLFFASSNLLKKIRQLEKDHTDFLLWDQILYQDWYNLT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC FRDELQAGELLEKRHKVLTTFQVHLKYVANTSNVPLERAYCMLKEEESQYQAGDDVWKFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH IDKLRKNRFDTATRSSAVAGEPLPIPEDGPAINFAEIFFKDDSALSGLRRRARSVYHYLN HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHEECCCHHHHHHHHHHHHHHHHHH DIDDGMMARHLSVPMAGYQLFKETFQIAMKCGDWKLLGRLWKAADPAYQQRYLRNMPVHL HCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCHHH KDFLQQIIAENASEEALEKEQAEAESLLRTTYRKLARLLHPDKQIGVSKEHQDWASIKWQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHH RVQAAYKAQDHDALKRIELLCMAELGQLNDLTTDEIYQSSLVLNEEYEALKRNLKACRKH HHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC PAWKFSSRRSYETLKKQARLELEKRFGPLEAEVHMLESLLKMLSAAEKQAVH CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKGLPLMHHDVSLTDDQNIRKDLFFASSNLLKKIRQLEKDHTDFLLWDQILYQDWYNLT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC FRDELQAGELLEKRHKVLTTFQVHLKYVANTSNVPLERAYCMLKEEESQYQAGDDVWKFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH IDKLRKNRFDTATRSSAVAGEPLPIPEDGPAINFAEIFFKDDSALSGLRRRARSVYHYLN HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHEECCCHHHHHHHHHHHHHHHHHH DIDDGMMARHLSVPMAGYQLFKETFQIAMKCGDWKLLGRLWKAADPAYQQRYLRNMPVHL HCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCHHH KDFLQQIIAENASEEALEKEQAEAESLLRTTYRKLARLLHPDKQIGVSKEHQDWASIKWQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHH RVQAAYKAQDHDALKRIELLCMAELGQLNDLTTDEIYQSSLVLNEEYEALKRNLKACRKH HHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC PAWKFSSRRSYETLKKQARLELEKRFGPLEAEVHMLESLLKMLSAAEKQAVH CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA