| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522453
Identifier: 42522453
GI number: 42522453
Start: 832770
End: 833078
Strand: Direct
Name: 42522453
Synonym: Bd0882
Alternate gene names: NA
Gene position: 832770-833078 (Clockwise)
Preceding gene: 42522452
Following gene: 42522455
Centisome position: 22.01
GC content: 55.02
Gene sequence:
>309_bases ATGAGTGATGATTCATTCAAAAATTTTCTTAAAGAAAATGCGGCCCCGGTGCCGGACGCCCCTTTGGGAGAGTCCTCGCG GATCTGGCGCCACATCGAAGATCGCAAGCACCGTCGTCAGCGGGCGTGGTGGGTGCTGGTGCCTGCGATGGCGGCGACTC TGGCCCTGGTGATTGCGGTGAAAACCCAGAAGCCTGCGGTGGTGGCAGGGGCGGAAGAGGATTATCTGTATCAGGAATGG AGTGAGTTTTCCAAGGAAGTCGATTCCGACTTTGATCAGGACATGGCTATCATGTTCAACGGCGAATAA
Upstream 100 bases:
>100_bases TTGCGCTGGCACTGGAGATCCCCGAGGGAACAGTGAAATCCCGTTTAAGCCTGGCTCGTCAGAAGATGAGCGATTTACTG GGTAAGAAAGGAGTGAGTCT
Downstream 100 bases:
>100_bases AAAAACGCGAACCCCGTGAGGGCTCGCGTTTTTGGATACTATTGTTTCTGGTAGTTTCTAGCGGATGGTAGAAAGAGCGC GTTTCAAAGCCTCTTCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSDDSFKNFLKENAAPVPDAPLGESSRIWRHIEDRKHRRQRAWWVLVPAMAATLALVIAVKTQKPAVVAGAEEDYLYQEW SEFSKEVDSDFDQDMAIMFNGE
Sequences:
>Translated_102_residues MSDDSFKNFLKENAAPVPDAPLGESSRIWRHIEDRKHRRQRAWWVLVPAMAATLALVIAVKTQKPAVVAGAEEDYLYQEW SEFSKEVDSDFDQDMAIMFNGE >Mature_101_residues SDDSFKNFLKENAAPVPDAPLGESSRIWRHIEDRKHRRQRAWWVLVPAMAATLALVIAVKTQKPAVVAGAEEDYLYQEWS EFSKEVDSDFDQDMAIMFNGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11700; Mature: 11569
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDSFKNFLKENAAPVPDAPLGESSRIWRHIEDRKHRRQRAWWVLVPAMAATLALVIAV CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTQKPAVVAGAEEDYLYQEWSEFSKEVDSDFDQDMAIMFNGE CCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure SDDSFKNFLKENAAPVPDAPLGESSRIWRHIEDRKHRRQRAWWVLVPAMAATLALVIAV CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTQKPAVVAGAEEDYLYQEWSEFSKEVDSDFDQDMAIMFNGE CCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA