| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522319
Identifier: 42522319
GI number: 42522319
Start: 696188
End: 697093
Strand: Direct
Name: 42522319
Synonym: Bd0735
Alternate gene names: NA
Gene position: 696188-697093 (Clockwise)
Preceding gene: 42522318
Following gene: 42522322
Centisome position: 18.4
GC content: 46.8
Gene sequence:
>906_bases ATGAAAACAGCTATATATTTACTTTTAGCGTTCTTGTTTTTGGCGGCTTCGGTCATTTCCTGCTCGGAAGAGCCCAAAGC ATTGATCCCGACGGATTTGCCCAGCACTGAAGAGCCGGAAACTCCAACTAACCCGGTGAACTCAGATCCAACAGTTGCGG CGGATACGGCGCTGTATTTCCGTCTTGGTTTGCAATGGGAGTCTGCTGTGGATGGAACTTTCGTGGATTGGCCGACTTCC ACTAGTTTGGGAGGTGATAGGTGCAATATTTCAGTGGCATCACCTTTGGCGCAAAGAAATATCACTTGTGCATTTTCAAT TCCGGAAGCGCGACTTTTCTACAGTCACGTCAATTTCAAAATGGGTACTTCCGTGGCTTCGGCGTGCCCCATTCTGAAAT TCCGACCTTATTACTATGTTCGATCGAATTTGGATGTCGTGGCGCCGGATCCGGCGGCGATGCCTCCAATTTTAGGTTCA CCGGGTTACACCCCTCCTGGCAGTGATACTGCAATTTCGTGCGGTGATGGGAAAGATAAGTCCTGCTATGGTGGCGCTGC CCCCACTTTGGTTCCTGAATTTCCAAAGAACGGTGGCCTCTATTTCTTAACGCATATCAATTCTGAAAGTGCTTATAAGC TCGGTTCAGAAAACAGCTTACGATACTACGGGAATGGTGGTGTATTGGTAAACTATTTGGTAACCAATAACCTGGATCCG GTAGGGCGTGGGATCACCGTTGCGACGAATTCCAACAAAAATGAACGCGTTGAGGATACCTTTTTTGACTATCATATTTC TTGCGTGAACTACTGGGGTGAAACATTGTATGAAATTAACCTGTTTATCTCCGATGAAAACTTTGATGATAGTGGCGGTG TCGACAACTACATCGACTGGAACTAG
Upstream 100 bases:
>100_bases TGAAAAATGTTTGTTATTGAAAGTCCGGTTTTTAGACAAGAAGCAAACAATTGTTGTTTAGTCCTCTTTTGGGAAGATCT GCGATTCCGATGCGTAGAGT
Downstream 100 bases:
>100_bases TCTGCTGTTGTTAGAAAATTGAAAACGAAAGAAGAGACCTAGGCTTCCTGGGTCTCTTTGCTTTTGTGGGTGATCTTTGC CGGGATTTGCTCCGCGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYFRLGLQWESAVDGTFVDWPTS TSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFKMGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGS PGYTPPGSDTAISCGDGKDKSCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDWN
Sequences:
>Translated_301_residues MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYFRLGLQWESAVDGTFVDWPTS TSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFKMGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGS PGYTPPGSDTAISCGDGKDKSCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDWN >Mature_301_residues MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYFRLGLQWESAVDGTFVDWPTS TSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFKMGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGS PGYTPPGSDTAISCGDGKDKSCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32737; Mature: 32737
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYF CCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECEEEEE RLGLQWESAVDGTFVDWPTSTSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFK EECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHCCEEEEEECCCCEEEEEECCEE MGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGSPGYTPPGSDTAISCGDGKDK ECCCHHHHCCEEEECCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC SCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCEEEEECCCEEEEEEEECCCCC VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDW CCCCEEEEECCCCCCCHHHHHHHEEEHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCC N C >Mature Secondary Structure MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYF CCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECEEEEE RLGLQWESAVDGTFVDWPTSTSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFK EECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHCCEEEEEECCCCEEEEEECCEE MGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGSPGYTPPGSDTAISCGDGKDK ECCCHHHHCCEEEECCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC SCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCEEEEECCCEEEEEEEECCCCC VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDW CCCCEEEEECCCCCCCHHHHHHHEEEHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA