Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522303

Identifier: 42522303

GI number: 42522303

Start: 675456

End: 677192

Strand: Direct

Name: 42522303

Synonym: Bd0718

Alternate gene names: NA

Gene position: 675456-677192 (Clockwise)

Preceding gene: 42522296

Following gene: 42522305

Centisome position: 17.86

GC content: 52.73

Gene sequence:

>1737_bases
GTGGTTCTTTTTGACCACAATGGGCCTATGCTTCAGTCGTGGTTTAGCCTATTTAGCGTCCTATTATTCAGTCCCCAACT
TTATGCCGAAAGCCCGCAAAGAGCTTTTATGGAGCAGTTCCAAAGCTCCCGAATCAGCTTCCCGGCGGAGGACTCTCCGT
TACTGGGTGACAGCCCGGGGCGTTATCCAGAGCCTTTGAATTTTATCATGACCAATCTCATCAGCTGGATTCCCACCGGT
GAACCCAAGCTGATGTCCTCAGGCTGTGCCCCGGAAGTTTGGGCGGCACGCATGCAAGACACGCGGGTTCAGAAGTCCGC
CCAGTTGCAGGGGGCCTTGGTGCAGAAATACTTCCAGGACTGCCGGTCCGAACTTGAAACCGGAGACAACGGTTCGTTAG
TCAATCTGCGCCGGATGATGACAATGAAGTACGACCCACAGGGGCATCCGTTCCTGCGCCGGGTGGTGGTCAATCTGCCA
GGCAACGTAAAACTGAAAGGTCTGCTGGGCTTGAAGGGCGACATGAAACGCCGTCCGCTGGTGATTGTGCGTCTGGGGAT
TTTTTCCAACGTTGAGGACTTCAAACCAGAGCGTGCGTGGCTGATGATGTTATTTGAACAGTCGCCGTTTAATGTTTTGA
TGCTTGAAAACATGTCCAGCCCGGACTTTGTTGCCAATAACAGCCGCTTCTCTTTCGGGGGGTATGACGAAGGCATTCAG
AATATTCTGGTGGCGCGACTGCTGCAGGACCCGATTGAACCTCTGTCGCAGATGGTGGACAGTGTACACGTGTTTGGCAT
CAGTCTGGGGGGGCATGGGGTGCTCTATTCCTCCCTTCTGAACAAATACAATTCACCGAAGCGCGGCCCGTTGATCAACA
GTTTCACGGCACTGTGTCCGGTGGTGAACCTGCGCTCGACGATGCAGTCCCTGACCCACAGTGGGGTGAAGTCCGCGTTT
GTGGATCTGTGGAGCCGCCAGCGCCTGAAAGGCCTTGAGCAGAAAATCCCTTCGCTGGTCACGTATGACAACTTTGCTTT
CCTGAGCAAGGCCATCTCTGAAATCGCCCGCACCTATCATGGCGGTCTTTCGTACGTGAAAGCCGTGAATCTGCCACCGG
GGCAGGAGGACAGCATTCATTTTTGGGATCTGAATGATTTCTGGCGCCACTACAAGCAGGTCGAAGAGCCGGTGATGATC
TATGCAACCGAGCAGGATCCGGCGGTGCCTTATGATCTGAATGCCCAGATGCTTTTGAATAAAGACCTGAAGGTGGACAG
CAAAAATATCCGCGTGGTGGAGTTGCCTCAGGGGATGCACTGCACTTTGCCGATTCCTTACGACTGGAGTGCTTTGACCT
CGTTGTTCCAGTCTTATATTTTGTCTCATTCCCCGAACTTTAAAATGACCGAACAAAAACTGGAGATGGATCTTTCCGAC
GAGGAGTGGACCGGGTTCTTTGACTCCGGCTCTCGCGTGAAGTTTGAAGTCGAAGAGCCAGGCAAAAAACAGGGCTTCGT
GACGGTCGGTTTGGAAGTGGAAAATGCCAAGGGCAAAACCAAGTCCATGAGTCTGAGTCTGCCGCTGTCGCAGTTTGATT
TCCGTTTCTTCAACAAAGACATGACCGGATCTGAGCAGGAAATGATCGTGCGCTGGCTGAATCAAAATTTGAAAGTGCGC
ATTGACCAAAGCAAAGGCAAAGCATTGCTCGTGGCCTCATGGCCGGTGGCCCTTTGA

Upstream 100 bases:

>100_bases
GGCTCTATCTTGTGTTCCATGGTATGTGTCTCCTTAAGTACACGGTGAAATTTTAGTGAAGTAAATACTCAAAGTCACTC
CGGAAAAAGGTGATGACTCA

Downstream 100 bases:

>100_bases
TTATTTCGACAGTTCTTCTTTGAAGAAGTCGGAATGCTCCGCCAGCTTTTCCATATAGCCCTGCACATCCTCTTTTGCCT
CTGCGGACAGGCGGTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MVLFDHNGPMLQSWFSLFSVLLFSPQLYAESPQRAFMEQFQSSRISFPAEDSPLLGDSPGRYPEPLNFIMTNLISWIPTG
EPKLMSSGCAPEVWAARMQDTRVQKSAQLQGALVQKYFQDCRSELETGDNGSLVNLRRMMTMKYDPQGHPFLRRVVVNLP
GNVKLKGLLGLKGDMKRRPLVIVRLGIFSNVEDFKPERAWLMMLFEQSPFNVLMLENMSSPDFVANNSRFSFGGYDEGIQ
NILVARLLQDPIEPLSQMVDSVHVFGISLGGHGVLYSSLLNKYNSPKRGPLINSFTALCPVVNLRSTMQSLTHSGVKSAF
VDLWSRQRLKGLEQKIPSLVTYDNFAFLSKAISEIARTYHGGLSYVKAVNLPPGQEDSIHFWDLNDFWRHYKQVEEPVMI
YATEQDPAVPYDLNAQMLLNKDLKVDSKNIRVVELPQGMHCTLPIPYDWSALTSLFQSYILSHSPNFKMTEQKLEMDLSD
EEWTGFFDSGSRVKFEVEEPGKKQGFVTVGLEVENAKGKTKSMSLSLPLSQFDFRFFNKDMTGSEQEMIVRWLNQNLKVR
IDQSKGKALLVASWPVAL

Sequences:

>Translated_578_residues
MVLFDHNGPMLQSWFSLFSVLLFSPQLYAESPQRAFMEQFQSSRISFPAEDSPLLGDSPGRYPEPLNFIMTNLISWIPTG
EPKLMSSGCAPEVWAARMQDTRVQKSAQLQGALVQKYFQDCRSELETGDNGSLVNLRRMMTMKYDPQGHPFLRRVVVNLP
GNVKLKGLLGLKGDMKRRPLVIVRLGIFSNVEDFKPERAWLMMLFEQSPFNVLMLENMSSPDFVANNSRFSFGGYDEGIQ
NILVARLLQDPIEPLSQMVDSVHVFGISLGGHGVLYSSLLNKYNSPKRGPLINSFTALCPVVNLRSTMQSLTHSGVKSAF
VDLWSRQRLKGLEQKIPSLVTYDNFAFLSKAISEIARTYHGGLSYVKAVNLPPGQEDSIHFWDLNDFWRHYKQVEEPVMI
YATEQDPAVPYDLNAQMLLNKDLKVDSKNIRVVELPQGMHCTLPIPYDWSALTSLFQSYILSHSPNFKMTEQKLEMDLSD
EEWTGFFDSGSRVKFEVEEPGKKQGFVTVGLEVENAKGKTKSMSLSLPLSQFDFRFFNKDMTGSEQEMIVRWLNQNLKVR
IDQSKGKALLVASWPVAL
>Mature_578_residues
MVLFDHNGPMLQSWFSLFSVLLFSPQLYAESPQRAFMEQFQSSRISFPAEDSPLLGDSPGRYPEPLNFIMTNLISWIPTG
EPKLMSSGCAPEVWAARMQDTRVQKSAQLQGALVQKYFQDCRSELETGDNGSLVNLRRMMTMKYDPQGHPFLRRVVVNLP
GNVKLKGLLGLKGDMKRRPLVIVRLGIFSNVEDFKPERAWLMMLFEQSPFNVLMLENMSSPDFVANNSRFSFGGYDEGIQ
NILVARLLQDPIEPLSQMVDSVHVFGISLGGHGVLYSSLLNKYNSPKRGPLINSFTALCPVVNLRSTMQSLTHSGVKSAF
VDLWSRQRLKGLEQKIPSLVTYDNFAFLSKAISEIARTYHGGLSYVKAVNLPPGQEDSIHFWDLNDFWRHYKQVEEPVMI
YATEQDPAVPYDLNAQMLLNKDLKVDSKNIRVVELPQGMHCTLPIPYDWSALTSLFQSYILSHSPNFKMTEQKLEMDLSD
EEWTGFFDSGSRVKFEVEEPGKKQGFVTVGLEVENAKGKTKSMSLSLPLSQFDFRFFNKDMTGSEQEMIVRWLNQNLKVR
IDQSKGKALLVASWPVAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65577; Mature: 65577

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLFDHNGPMLQSWFSLFSVLLFSPQLYAESPQRAFMEQFQSSRISFPAEDSPLLGDSPG
CEEECCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RYPEPLNFIMTNLISWIPTGEPKLMSSGCAPEVWAARMQDTRVQKSAQLQGALVQKYFQD
CCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRSELETGDNGSLVNLRRMMTMKYDPQGHPFLRRVVVNLPGNVKLKGLLGLKGDMKRRPL
HHHHHCCCCCCCEEEEEHHHEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCE
VIVRLGIFSNVEDFKPERAWLMMLFEQSPFNVLMLENMSSPDFVANNSRFSFGGYDEGIQ
EEEEECCCCCHHHCCCCHHHEEEEECCCCCEEEEEECCCCCCEEECCCEEECCCHHHHHH
NILVARLLQDPIEPLSQMVDSVHVFGISLGGHGVLYSSLLNKYNSPKRGPLINSFTALCP
HHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VVNLRSTMQSLTHSGVKSAFVDLWSRQRLKGLEQKIPSLVTYDNFAFLSKAISEIARTYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHH
GGLSYVKAVNLPPGQEDSIHFWDLNDFWRHYKQVEEPVMIYATEQDPAVPYDLNAQMLLN
CCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEC
KDLKVDSKNIRVVELPQGMHCTLPIPYDWSALTSLFQSYILSHSPNFKMTEQKLEMDLSD
CCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
EEWTGFFDSGSRVKFEVEEPGKKQGFVTVGLEVENAKGKTKSMSLSLPLSQFDFRFFNKD
CCCCCEECCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEECCHHHHHHHHHCCC
MTGSEQEMIVRWLNQNLKVRIDQSKGKALLVASWPVAL
CCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCC
>Mature Secondary Structure
MVLFDHNGPMLQSWFSLFSVLLFSPQLYAESPQRAFMEQFQSSRISFPAEDSPLLGDSPG
CEEECCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RYPEPLNFIMTNLISWIPTGEPKLMSSGCAPEVWAARMQDTRVQKSAQLQGALVQKYFQD
CCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRSELETGDNGSLVNLRRMMTMKYDPQGHPFLRRVVVNLPGNVKLKGLLGLKGDMKRRPL
HHHHHCCCCCCCEEEEEHHHEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCE
VIVRLGIFSNVEDFKPERAWLMMLFEQSPFNVLMLENMSSPDFVANNSRFSFGGYDEGIQ
EEEEECCCCCHHHCCCCHHHEEEEECCCCCEEEEEECCCCCCEEECCCEEECCCHHHHHH
NILVARLLQDPIEPLSQMVDSVHVFGISLGGHGVLYSSLLNKYNSPKRGPLINSFTALCP
HHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VVNLRSTMQSLTHSGVKSAFVDLWSRQRLKGLEQKIPSLVTYDNFAFLSKAISEIARTYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHH
GGLSYVKAVNLPPGQEDSIHFWDLNDFWRHYKQVEEPVMIYATEQDPAVPYDLNAQMLLN
CCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEC
KDLKVDSKNIRVVELPQGMHCTLPIPYDWSALTSLFQSYILSHSPNFKMTEQKLEMDLSD
CCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
EEWTGFFDSGSRVKFEVEEPGKKQGFVTVGLEVENAKGKTKSMSLSLPLSQFDFRFFNKD
CCCCCEECCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEECCHHHHHHHHHCCC
MTGSEQEMIVRWLNQNLKVRIDQSKGKALLVASWPVAL
CCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA