Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522263

Identifier: 42522263

GI number: 42522263

Start: 626328

End: 627881

Strand: Direct

Name: 42522263

Synonym: Bd0676

Alternate gene names: NA

Gene position: 626328-627881 (Clockwise)

Preceding gene: 42522262

Following gene: 42522264

Centisome position: 16.56

GC content: 51.22

Gene sequence:

>1554_bases
ATGCACGTCCCTGCTTTTGTGATGCTATTTCTGCTTGTCCTGTGTTCGCCGATTCTGGCGACGGCTGAATCCAATTTGGA
ATTGCTGTACACAAAGCAGATTGCCTGGACAGCAGCAAACCTGGAAGACCCCAAGGTTGTCAGTGCTTTCCGCACTTCAT
TTCAGGATCTGGTCGCTGATAAATCCAAAATCGCCCAGCTACAGACATCCGAGGGCAAAAAGATTCTGCAACAGGGACAA
AGCCTGCTGTCAGTCATTCAGCTGAAAGAGAACCTGCAAAAGTGTCTGCTGTCCCACGCGGCCGCCAAGGGTGTTTCCGA
GGCCTTGGCCAAGGCTTTGGATTCCCAAGTCTTAAATGGCGCTGTGTGTGCCGAGGTTGTGGCAGAAGAAAAGAAGATGC
AGGCCTTTGGCAAAGACATGGAAAAGGCATTCAAAGAAGATGCTCGTAATAAGATCCTGAATACGGCAAAAAAGCAGCTG
AATGTCACTCGAGCCTACTGGAAAGAAGCCGCCAAACAAGACGCCCTGGATATCGCGGTGGAGCTGACGGATCGCGAACG
TGAAATGAAGGTCAAGCCTCCGCAATCCGGAACTGAACTCCTGCTTTATACCAAAGCCATTCGCGAACGAAGAAACAAAA
ACGTGATCGTTCAAAACGATGTGAAGAAAGCCTTCGCCGAAGTTCAGACCGAGCTAAAAAATCACGAGGACTATTTAAAC
GAAGCGGCCAAGGGCAGTGTTGACGAGACTTTGCAAAGTCTGCTGGTAACGAACCCAGCGGCCAGTGCGCAGTTCCTGAT
GGAAAATCCGGGGGCTTCAGATCTGATCTGTAAGATCCTGCAGGGTTACGACAAGAAAGCCCAGAAAAACGAAATCCTGG
ATAAAGCCATGTTCTGGGGTGGACTTGTTGTTGGCGGTGTTTTGCTGGCGACAGGTATTGGAGCCGGGGTCGGCGCGATG
GTTCTTTCCGGAACTGCCGCCGCGGGAACCTTGACCACAGTTGCGGCCGGGGCTGCCTTGGCGGGCACTATCGCTGCGGG
TGGGGAAACAGTCTATGCCTCTTCAAAAGCCCATGAATCCTTTATCGAGGCCCGAAATCTGAGGGCCTCGGCATTTGCTG
AAGGGTCTTCCAAAGAATCCTTCAGCAAGGCAGACGCGGCAAAAGATCAGGCTTATTCTGATCTGGCAGAGGCGGGCTTT
TCTGCTGCTTCCATCATCCCATTTGGGGCGGGTTTGAAGGTTATGAAAAATGCCGCTCAGGCTTCGCGCCTGGGATCTTA
CGCGAAAGTGGCCAAAGAAGGTGCCAAGGTCGAAACGGACGCGGTGAAGTCCATGGCGACGTCTTTAAAAGAAATCTCTT
CCGACAAAGATGTTTTAAAGGTTCTGGAAACCAGCCAGAAGCAGGTGAATTCCGAAGAGATGGGGATGTTCCTGGGGTAT
TTGTCTGATTTGCCTAAAGATCAGCGCAAGGAAGTTCTGGCGCTATTAAAGAAGAAACCGGAAAAAGCTGCGGATGCCAT
TCGCGAATCTTCCAAATCTGGGGTGTGCAAATGA

Upstream 100 bases:

>100_bases
TGTGGGTTTTTTATTTTCAGAGGGCGAAGTCTCAATCTGAGACAACAATCTTCACAAAAGTCCGGTCAGTTTACGGCTGC
AGATCACCGATAAGTTCGGA

Downstream 100 bases:

>100_bases
AGAATCTGATTCTGTTGGTATTGCTGCCCTTGGTTTTGCCAATTGTAACCTTCGCCCAAACAGCGGATGAAGTCCGTCGC
ATCATGAATTCGCAAAGCAG

Product: tolA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MHVPAFVMLFLLVLCSPILATAESNLELLYTKQIAWTAANLEDPKVVSAFRTSFQDLVADKSKIAQLQTSEGKKILQQGQ
SLLSVIQLKENLQKCLLSHAAAKGVSEALAKALDSQVLNGAVCAEVVAEEKKMQAFGKDMEKAFKEDARNKILNTAKKQL
NVTRAYWKEAAKQDALDIAVELTDREREMKVKPPQSGTELLLYTKAIRERRNKNVIVQNDVKKAFAEVQTELKNHEDYLN
EAAKGSVDETLQSLLVTNPAASAQFLMENPGASDLICKILQGYDKKAQKNEILDKAMFWGGLVVGGVLLATGIGAGVGAM
VLSGTAAAGTLTTVAAGAALAGTIAAGGETVYASSKAHESFIEARNLRASAFAEGSSKESFSKADAAKDQAYSDLAEAGF
SAASIIPFGAGLKVMKNAAQASRLGSYAKVAKEGAKVETDAVKSMATSLKEISSDKDVLKVLETSQKQVNSEEMGMFLGY
LSDLPKDQRKEVLALLKKKPEKAADAIRESSKSGVCK

Sequences:

>Translated_517_residues
MHVPAFVMLFLLVLCSPILATAESNLELLYTKQIAWTAANLEDPKVVSAFRTSFQDLVADKSKIAQLQTSEGKKILQQGQ
SLLSVIQLKENLQKCLLSHAAAKGVSEALAKALDSQVLNGAVCAEVVAEEKKMQAFGKDMEKAFKEDARNKILNTAKKQL
NVTRAYWKEAAKQDALDIAVELTDREREMKVKPPQSGTELLLYTKAIRERRNKNVIVQNDVKKAFAEVQTELKNHEDYLN
EAAKGSVDETLQSLLVTNPAASAQFLMENPGASDLICKILQGYDKKAQKNEILDKAMFWGGLVVGGVLLATGIGAGVGAM
VLSGTAAAGTLTTVAAGAALAGTIAAGGETVYASSKAHESFIEARNLRASAFAEGSSKESFSKADAAKDQAYSDLAEAGF
SAASIIPFGAGLKVMKNAAQASRLGSYAKVAKEGAKVETDAVKSMATSLKEISSDKDVLKVLETSQKQVNSEEMGMFLGY
LSDLPKDQRKEVLALLKKKPEKAADAIRESSKSGVCK
>Mature_517_residues
MHVPAFVMLFLLVLCSPILATAESNLELLYTKQIAWTAANLEDPKVVSAFRTSFQDLVADKSKIAQLQTSEGKKILQQGQ
SLLSVIQLKENLQKCLLSHAAAKGVSEALAKALDSQVLNGAVCAEVVAEEKKMQAFGKDMEKAFKEDARNKILNTAKKQL
NVTRAYWKEAAKQDALDIAVELTDREREMKVKPPQSGTELLLYTKAIRERRNKNVIVQNDVKKAFAEVQTELKNHEDYLN
EAAKGSVDETLQSLLVTNPAASAQFLMENPGASDLICKILQGYDKKAQKNEILDKAMFWGGLVVGGVLLATGIGAGVGAM
VLSGTAAAGTLTTVAAGAALAGTIAAGGETVYASSKAHESFIEARNLRASAFAEGSSKESFSKADAAKDQAYSDLAEAGF
SAASIIPFGAGLKVMKNAAQASRLGSYAKVAKEGAKVETDAVKSMATSLKEISSDKDVLKVLETSQKQVNSEEMGMFLGY
LSDLPKDQRKEVLALLKKKPEKAADAIRESSKSGVCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55331; Mature: 55331

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVPAFVMLFLLVLCSPILATAESNLELLYTKQIAWTAANLEDPKVVSAFRTSFQDLVAD
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHEECCCCCHHHHHHHHHHHHHHHHH
KSKIAQLQTSEGKKILQQGQSLLSVIQLKENLQKCLLSHAAAKGVSEALAKALDSQVLNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVCAEVVAEEKKMQAFGKDMEKAFKEDARNKILNTAKKQLNVTRAYWKEAAKQDALDIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
ELTDREREMKVKPPQSGTELLLYTKAIRERRNKNVIVQNDVKKAFAEVQTELKNHEDYLN
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
EAAKGSVDETLQSLLVTNPAASAQFLMENPGASDLICKILQGYDKKAQKNEILDKAMFWG
HHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
GLVVGGVLLATGIGAGVGAMVLSGTAAAGTLTTVAAGAALAGTIAAGGETVYASSKAHES
HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH
FIEARNLRASAFAEGSSKESFSKADAAKDQAYSDLAEAGFSAASIIPFGAGLKVMKNAAQ
HHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHH
ASRLGSYAKVAKEGAKVETDAVKSMATSLKEISSDKDVLKVLETSQKQVNSEEMGMFLGY
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LSDLPKDQRKEVLALLKKKPEKAADAIRESSKSGVCK
HHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHVPAFVMLFLLVLCSPILATAESNLELLYTKQIAWTAANLEDPKVVSAFRTSFQDLVAD
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHEECCCCCHHHHHHHHHHHHHHHHH
KSKIAQLQTSEGKKILQQGQSLLSVIQLKENLQKCLLSHAAAKGVSEALAKALDSQVLNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVCAEVVAEEKKMQAFGKDMEKAFKEDARNKILNTAKKQLNVTRAYWKEAAKQDALDIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
ELTDREREMKVKPPQSGTELLLYTKAIRERRNKNVIVQNDVKKAFAEVQTELKNHEDYLN
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
EAAKGSVDETLQSLLVTNPAASAQFLMENPGASDLICKILQGYDKKAQKNEILDKAMFWG
HHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
GLVVGGVLLATGIGAGVGAMVLSGTAAAGTLTTVAAGAALAGTIAAGGETVYASSKAHES
HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH
FIEARNLRASAFAEGSSKESFSKADAAKDQAYSDLAEAGFSAASIIPFGAGLKVMKNAAQ
HHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHH
ASRLGSYAKVAKEGAKVETDAVKSMATSLKEISSDKDVLKVLETSQKQVNSEEMGMFLGY
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LSDLPKDQRKEVLALLKKKPEKAADAIRESSKSGVCK
HHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA