| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522262
Identifier: 42522262
GI number: 42522262
Start: 625574
End: 626182
Strand: Direct
Name: 42522262
Synonym: Bd0675
Alternate gene names: NA
Gene position: 625574-626182 (Clockwise)
Preceding gene: 42522260
Following gene: 42522263
Centisome position: 16.54
GC content: 47.45
Gene sequence:
>609_bases GTGAGGCTCCTGTCGAAGCCTAAGCCATTGGAAGGCAGTTTTTTCATGGTGCGGTTGTCAGTTCGAATAGGATGGCACCG GGGGCCGTTTTTGGCTGGCACAGGATTTGGAGTAAAGGGCACAAAACAAGGAAACACTATGAAAAATATGTTTGGAAAAA TTCTGGCTTCGACTCTTCTTTTGTCTTCCATTTCCGCTTCTGCTGGTGGCAATGACTTTGTGAGCCGCCTCAAGGCACTT GATGGCCGTGAAGGTAAAATCGTGTCTTCTTATGATGACGAAAATACCGGCCGTTGCCGTCTTGAGCTGCAAAAATATGA ACTTGAAGATGGCAGCCAGGGCCTAGCAGTTTATCTGCAAGACACCGGTATGTACTTCACTCCAAGTGCAGGTCTTGATA AAGAAACAAAACTGAAAGATGCCAACACAGCTGTTGTTAGCACCAGCTCCGAGCGTCCGGGTGGCGATGCGTGCGGTGAT TTCGGTGGTGCGCTTGGTTACAAAAAAGTTCTTGTCCTGAAAGACAATCAAGTGACCATTCGTGAGACCTTCCGTTGTGT GATGGATGGCTTTAAGAAATACGATCTTTCCACGACTTGCCAGTTCTAA
Upstream 100 bases:
>100_bases AAATAGTCAACAATCGACGTTCTTTTGAAGCTGCCAAATTACCTAAAATACCGAGTATTTTCGCAAATGGGACACTTCCG CTTAAGCGGGGAACCTTGGG
Downstream 100 bases:
>100_bases TCTGAACTGAACAAGATAGTGAAAACTGAACCCACACTGAAAAGGTGTGGGTTTTTTATTTTCAGAGGGCGAAGTCTCAA TCTGAGACAACAATCTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MRLLSKPKPLEGSFFMVRLSVRIGWHRGPFLAGTGFGVKGTKQGNTMKNMFGKILASTLLLSSISASAGGNDFVSRLKAL DGREGKIVSSYDDENTGRCRLELQKYELEDGSQGLAVYLQDTGMYFTPSAGLDKETKLKDANTAVVSTSSERPGGDACGD FGGALGYKKVLVLKDNQVTIRETFRCVMDGFKKYDLSTTCQF
Sequences:
>Translated_202_residues MRLLSKPKPLEGSFFMVRLSVRIGWHRGPFLAGTGFGVKGTKQGNTMKNMFGKILASTLLLSSISASAGGNDFVSRLKAL DGREGKIVSSYDDENTGRCRLELQKYELEDGSQGLAVYLQDTGMYFTPSAGLDKETKLKDANTAVVSTSSERPGGDACGD FGGALGYKKVLVLKDNQVTIRETFRCVMDGFKKYDLSTTCQF >Mature_202_residues MRLLSKPKPLEGSFFMVRLSVRIGWHRGPFLAGTGFGVKGTKQGNTMKNMFGKILASTLLLSSISASAGGNDFVSRLKAL DGREGKIVSSYDDENTGRCRLELQKYELEDGSQGLAVYLQDTGMYFTPSAGLDKETKLKDANTAVVSTSSERPGGDACGD FGGALGYKKVLVLKDNQVTIRETFRCVMDGFKKYDLSTTCQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21982; Mature: 21982
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLSKPKPLEGSFFMVRLSVRIGWHRGPFLAGTGFGVKGTKQGNTMKNMFGKILASTLL CCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LSSISASAGGNDFVSRLKALDGREGKIVSSYDDENTGRCRLELQKYELEDGSQGLAVYLQ HHHHCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEEE DTGMYFTPSAGLDKETKLKDANTAVVSTSSERPGGDACGDFGGALGYKKVLVLKDNQVTI CCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCEEEEEEECCCEEH RETFRCVMDGFKKYDLSTTCQF HHHHHHHHHHHHHCCCCEECCC >Mature Secondary Structure MRLLSKPKPLEGSFFMVRLSVRIGWHRGPFLAGTGFGVKGTKQGNTMKNMFGKILASTLL CCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LSSISASAGGNDFVSRLKALDGREGKIVSSYDDENTGRCRLELQKYELEDGSQGLAVYLQ HHHHCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEEE DTGMYFTPSAGLDKETKLKDANTAVVSTSSERPGGDACGDFGGALGYKKVLVLKDNQVTI CCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCEEEEEEECCCEEH RETFRCVMDGFKKYDLSTTCQF HHHHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA