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The map label for this gene is fliD [H]

Identifier: 42522203

GI number: 42522203

Start: 570624

End: 571991

Strand: Direct

Name: fliD [H]

Synonym: Bd0610

Alternate gene names: 42522203

Gene position: 570624-571991 (Clockwise)

Preceding gene: 42522202

Following gene: 42522204

Centisome position: 15.08

GC content: 52.92

Gene sequence:

>1368_bases
ATGGCAGGATTCCGAATTACAGGCATGGCCTCTGGGCTACCACCAAATATCGTTGAGCAGCTGATGGAAGCTGAACGTAT
TCCTGTGAAACAGATGGAAGTCGGCCGCGCCAAGCAGGAGGACAAACTCAAGCTGGTGCAGGATTTGGAAACCAAGGTGA
ATGACATCACCAAGAATCTGGGTGAGCTGACTTCCACCAGTGGTTTTGTCGACAAAAAGTTCCTGAGTGGCGATCCCAAT
ATTGTGGATGGTCAGGTCGACCCCGGAAGTGCCATTCCCGGAGACTATGCCATTGAAGTGGTGCAGCTGGCGCAAAAGCC
GGCGGCCATGTCCAACGGTTTCCCGGACAAGGATCAGACTCAGATCGGTGTTGGTTATATCAAGTTCGAAACACCGGAAG
GAACAAAAGAGGTTTACATCAACGGATCCAATTCGACTTTGGATGGCGTGATGAAACAGATCAACGCCGCCAACGTGGGT
TTGAAGGCCCAGGTGGTGGAGGATCGCAAGGATCAGGAAAACCCGTTCAAGCTTCTTGTGTCGGGTCTTTCCACCGGTAA
CGACAGTCAGGTGACCTTCCCGAAGATTTATCTTCTGGACGGGGATCAGGACATGTACTTCGAAGAGTCGCGCAAGGCGC
AGAACGCGAAGGTCAAGGTCGACGGCTTTGAGATCGAACTTCCCGACAACAAATCCACGGATTTGGTGCCGGGTGTGACA
TTGGATTTTAAATCAGCGGCGCCGGGGCGCGAGATTCGCCTTTCTGTGAAAGAGAATCTTGAGGTCATCAGCGGCAAGAT
TAAAAGCTTTGTGGATTCATACAATGCGGCTTTGGAGTTCATCCAGAAGCAGAACAAGCTGCAGGCCGGTAACGGCAAGA
ACCCGGCACTGGGTCCTCTGGGCGGTGACGGCATGCTGCGCTCGATTGAGAACAGTCTGCGCCGTGTGATTCTGAATCCA
CAGATGGGTGTGGAGTCACCCATCCGCCGAGTGGGCGAGCTGGGGATTGAGTTCAACAGAAACGGTACCTTGAACTTCTC
GCAAGACAAGTTCAACAAAGTGCTGCAGGCCAACCCAAAGGCGGTGGCGGCGTTCCTGCGCGGTGACGGTTTTAACACAG
GCTTTGTGTCCACCGTGAAGCGTGAGATCGGAAATCTGGTGAACGGGCAGTTCGGTACCATCTCCAACCGTAAGCGCGGT
CTGGAGGATCGTATCAAGCAGGTGAACAACCGTATTGAAACGAAAGAACGCCAGTTGGAAAGAAAAGAAGACAGCCTGCG
ACGTAAGTTTGCAGATCTGGAACAGAAGATGTCTGCGTTGAACGCTCAGCAGGCTAAGTTTGCGGCGATGTCGCAGCCAC
AGGGTTAA

Upstream 100 bases:

>100_bases
GGGTTTATTTTCATTAGAGCCCTGAAAGCCTCTCCACTGGCCTTTCCTAGAGACATTTAATTGACTCACGGTCACTGAAT
CATTTTGACACAATGGATTC

Downstream 100 bases:

>100_bases
GAACGTTGAAAATGGATAAGGGAAGAAGTGAGGGGTCATGAATAAAAATGCATATCAGAAGTACAAAACGACTTCGGTAC
AAAGCGCCAGCCGCGAAAAA

Product: flagellar hook associated protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MAGFRITGMASGLPPNIVEQLMEAERIPVKQMEVGRAKQEDKLKLVQDLETKVNDITKNLGELTSTSGFVDKKFLSGDPN
IVDGQVDPGSAIPGDYAIEVVQLAQKPAAMSNGFPDKDQTQIGVGYIKFETPEGTKEVYINGSNSTLDGVMKQINAANVG
LKAQVVEDRKDQENPFKLLVSGLSTGNDSQVTFPKIYLLDGDQDMYFEESRKAQNAKVKVDGFEIELPDNKSTDLVPGVT
LDFKSAAPGREIRLSVKENLEVISGKIKSFVDSYNAALEFIQKQNKLQAGNGKNPALGPLGGDGMLRSIENSLRRVILNP
QMGVESPIRRVGELGIEFNRNGTLNFSQDKFNKVLQANPKAVAAFLRGDGFNTGFVSTVKREIGNLVNGQFGTISNRKRG
LEDRIKQVNNRIETKERQLERKEDSLRRKFADLEQKMSALNAQQAKFAAMSQPQG

Sequences:

>Translated_455_residues
MAGFRITGMASGLPPNIVEQLMEAERIPVKQMEVGRAKQEDKLKLVQDLETKVNDITKNLGELTSTSGFVDKKFLSGDPN
IVDGQVDPGSAIPGDYAIEVVQLAQKPAAMSNGFPDKDQTQIGVGYIKFETPEGTKEVYINGSNSTLDGVMKQINAANVG
LKAQVVEDRKDQENPFKLLVSGLSTGNDSQVTFPKIYLLDGDQDMYFEESRKAQNAKVKVDGFEIELPDNKSTDLVPGVT
LDFKSAAPGREIRLSVKENLEVISGKIKSFVDSYNAALEFIQKQNKLQAGNGKNPALGPLGGDGMLRSIENSLRRVILNP
QMGVESPIRRVGELGIEFNRNGTLNFSQDKFNKVLQANPKAVAAFLRGDGFNTGFVSTVKREIGNLVNGQFGTISNRKRG
LEDRIKQVNNRIETKERQLERKEDSLRRKFADLEQKMSALNAQQAKFAAMSQPQG
>Mature_454_residues
AGFRITGMASGLPPNIVEQLMEAERIPVKQMEVGRAKQEDKLKLVQDLETKVNDITKNLGELTSTSGFVDKKFLSGDPNI
VDGQVDPGSAIPGDYAIEVVQLAQKPAAMSNGFPDKDQTQIGVGYIKFETPEGTKEVYINGSNSTLDGVMKQINAANVGL
KAQVVEDRKDQENPFKLLVSGLSTGNDSQVTFPKIYLLDGDQDMYFEESRKAQNAKVKVDGFEIELPDNKSTDLVPGVTL
DFKSAAPGREIRLSVKENLEVISGKIKSFVDSYNAALEFIQKQNKLQAGNGKNPALGPLGGDGMLRSIENSLRRVILNPQ
MGVESPIRRVGELGIEFNRNGTLNFSQDKFNKVLQANPKAVAAFLRGDGFNTGFVSTVKREIGNLVNGQFGTISNRKRGL
EDRIKQVNNRIETKERQLERKEDSLRRKFADLEQKMSALNAQQAKFAAMSQPQG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=381, Percent_Identity=23.0971128608924, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 49985; Mature: 49854

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFRITGMASGLPPNIVEQLMEAERIPVKQMEVGRAKQEDKLKLVQDLETKVNDITKNL
CCCCEEECCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GELTSTSGFVDKKFLSGDPNIVDGQVDPGSAIPGDYAIEVVQLAQKPAAMSNGFPDKDQT
HHHHCCCCCCHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCC
QIGVGYIKFETPEGTKEVYINGSNSTLDGVMKQINAANVGLKAQVVEDRKDQENPFKLLV
EEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHH
SGLSTGNDSQVTFPKIYLLDGDQDMYFEESRKAQNAKVKVDGFEIELPDNKSTDLVPGVT
HHCCCCCCCEEEEEEEEEEECCCCCHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCCCE
LDFKSAAPGREIRLSVKENLEVISGKIKSFVDSYNAALEFIQKQNKLQAGNGKNPALGPL
EECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GGDGMLRSIENSLRRVILNPQMGVESPIRRVGELGIEFNRNGTLNFSQDKFNKVLQANPK
CCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCEEECCCCCEEECHHHHHHHHHCCHH
AVAAFLRGDGFNTGFVSTVKREIGNLVNGQFGTISNRKRGLEDRIKQVNNRIETKERQLE
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHH
RKEDSLRRKFADLEQKMSALNAQQAKFAAMSQPQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AGFRITGMASGLPPNIVEQLMEAERIPVKQMEVGRAKQEDKLKLVQDLETKVNDITKNL
CCCEEECCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GELTSTSGFVDKKFLSGDPNIVDGQVDPGSAIPGDYAIEVVQLAQKPAAMSNGFPDKDQT
HHHHCCCCCCHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCC
QIGVGYIKFETPEGTKEVYINGSNSTLDGVMKQINAANVGLKAQVVEDRKDQENPFKLLV
EEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHH
SGLSTGNDSQVTFPKIYLLDGDQDMYFEESRKAQNAKVKVDGFEIELPDNKSTDLVPGVT
HHCCCCCCCEEEEEEEEEEECCCCCHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCCCE
LDFKSAAPGREIRLSVKENLEVISGKIKSFVDSYNAALEFIQKQNKLQAGNGKNPALGPL
EECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GGDGMLRSIENSLRRVILNPQMGVESPIRRVGELGIEFNRNGTLNFSQDKFNKVLQANPK
CCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCEEECCCCCEEECHHHHHHHHHCCHH
AVAAFLRGDGFNTGFVSTVKREIGNLVNGQFGTISNRKRGLEDRIKQVNNRIETKERQLE
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHH
RKEDSLRRKFADLEQKMSALNAQQAKFAAMSQPQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]