| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522200
Identifier: 42522200
GI number: 42522200
Start: 565438
End: 567585
Strand: Direct
Name: 42522200
Synonym: Bd0607
Alternate gene names: NA
Gene position: 565438-567585 (Clockwise)
Preceding gene: 42522199
Following gene: 42522202
Centisome position: 14.95
GC content: 50.0
Gene sequence:
>2148_bases ATGCTGTCCTGGAGCCGTTCTACATTTGCCATGCTTCTTTGCTCATCCATGCTTGTGGCCTGTACGAAAGAGACTGAAAA AGTCATCGTGAAAGAAGCCCTGCCTCCCGCAAAGATCGAAGCTTCGGCTAAGGTCAGTAAGAACCTTGTGACCTTTGAAA AGTCGTCTTTGGGCAAACTCTTCATGCTGGTTCCCACGGCCATCGATTCCTCCCGGTCCGCCGCTCCCAGTTTCTTTCGC CCCCAGTTGATTTCCTTTGAAAGACAAGGCGATCGCATCGCGGTCTTCAATCAGACGGTCAAAGACGTCGTCGAGACGGT CACGGCCGATCAGCTTATTCAGAGTTTTGCGGTCGTTGATGAAACCACCGAGCAGATCGTTTTTGACCTGGGTCAGGGAT TCCTGTCCATGAATCTTCAGGACGCCATGGATATCGTTTTGCCATACACGTATTCTGATGTGATTGAAAAAGGGGAGCGT AAACTGGAATCCCATCTGGATATCAAGGATTCCTATGTTAGTTCTCTTTCCCTGCGTAACAATTCCATTCTGATCAAGCA GGTGATCCGCATCGTGGAAAAAGCGCGTCCTTCTGGTGGAGGGAACAAAGAGGCCGAAGAAAAGTTGAAACAGATCGGCA TGCAAAAGCCTGAGAAGTTCGAGACCAGCAAGACTCTGTTCTTTGAAATCAAGCCTTACGTGCAAAACGAATATTTCAAG TCCAAGCCCATGGACGCCCAGAACCGCTTTGGCTTCTTCGTTAACAACACCTTCAAAAAAGGTGAAGACAATATGAAAAC CCAGATCGCACGCTGGAGCATCGACGAAAAAGACGGCGATATCCGTGTGTTGATTGATGCCAACGTTCCTCAGAAAATGG AAGCTGCCGTCAGGGAAGGCGTGACCTATTGGAACCGCGTTCTAGGCCGTGACATTCTGAAAGTTGAGACCGGTTACAAG GATTCAGACCCACAAACGGACCGCTCGATCGTGATCCGCTGGATTCACTGGGATCACGGGTTTGGAGCCTATGCCAATGC CCAGATGGATCCTCTGACGGGAGAAGCCTTCCGTGGTTTTGTCTATATGACATCGTCCTTCACGAAAAAAGACGACATGA AGCCTGATAACGGCGGCGGAGTTTTTTCTTTCAAGCACGGTGATCTGTGTGGGATGAGAATGGACATGGACCCGTCAGAC CAGGAAGACTCTGTGCGCGCGGTGATAGCTCACGAGATGGGGCACGTTCTGGGGCTTCGTCACAACTTTGCCGGCAGTTC CTCGACCGAACATACGGATGCTGAAATCAAAGAGGCAATCAATCAGCGCAAAAATGGAAATCTGGTCGCAGAAAAGTCCG TAGTGACGACCGTGATGGACTATACTGACGACGTGGCTTCTTTGGTTTCGGGTGCCTTCATCAAGGACAATGTCATGCCC TATGACAAGAAGGCCATTGATTGGGCTTATAAGGATGTCGATTCCGCAAAGATCAAAGGCATGTACTGCTCAGATGAGCA CATTTTGGATGCGGGAGCCGGCGGACGAAATATTATTGGATGTGAACGTCAGGACCTGTACCGCAATGTCTTCTTTGCAG AGAGAGAAAGAATCCTGGCGACTGCAAAAGACACTTTGAACAGCACGATCACCTCTCTGGAATACATGAAAAAAGCCGGA TACAAAATTGAGCACAAAGCCTATGTGCAGATGACTTTCAGTCCGACCCTGGAGATTGCCGAATCCCTGTATAAGAGCGA CAAGAAGAATCCGTTGCTGACAATTGCTGATGTGGTCGAGGACTTCCTGTCTCCATACATGCGTTGGGGCTACAACGCCA AGGACTATGGGAATGGATCCATGAACGGAGATGCCGAGGTCAATGAACAGCTGAAAGAAATGGGCGGATTGACGGCTTAC CTGAGGACGCTGAGCCCGACTTCTGACGATCCGGAGTACTTCCAGAAGCTGGCCAAAGAAGCTCTGGCCGCTGGAAAGTT TGACAACATAGGTCTGACCCCTGAAGAGCTTCAGGTGGTCAAAGAAGGTCTTCTGGAAAACTCTGCAAAGCTTGATGCAG AGGCTGCAGACCTTGCTTTGAAAGCCGTGGACGTCAGCAGGCTTCGCGACACCATCACTAGCCGGTAG
Upstream 100 bases:
>100_bases CCTGTTGAGTTGGATATGGTGTCCGGCTCAGACCCAATTTTGGGTTCGCTGTCTCTTTTTTAGACGGCGGCAAGTGGTTT AAATCGATTTGGGAGTACGT
Downstream 100 bases:
>100_bases TCAGCATCCCGCTGGCGATCCCCGTGACGGTTTCCCTGAGCAGCTTGATGTCCGTGGTTTCCAGGGCCACCAGCTGCAAG ACGTTCAGCGGGTGAATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 715; Mature: 715
Protein sequence:
>715_residues MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKLFMLVPTAIDSSRSAAPSFFR PQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVDETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGER KLESHLDIKDSYVSSLSLRNNSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREGVTYWNRVLGRDILKVETGYK DSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGFVYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSD QEDSVRAVIAHEMGHVLGLRHNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILATAKDTLNSTITSLEYMKKAG YKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVEDFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAY LRTLSPTSDDPEYFQKLAKEALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR
Sequences:
>Translated_715_residues MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKLFMLVPTAIDSSRSAAPSFFR PQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVDETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGER KLESHLDIKDSYVSSLSLRNNSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREGVTYWNRVLGRDILKVETGYK DSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGFVYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSD QEDSVRAVIAHEMGHVLGLRHNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILATAKDTLNSTITSLEYMKKAG YKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVEDFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAY LRTLSPTSDDPEYFQKLAKEALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR >Mature_715_residues MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKLFMLVPTAIDSSRSAAPSFFR PQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVDETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGER KLESHLDIKDSYVSSLSLRNNSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREGVTYWNRVLGRDILKVETGYK DSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGFVYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSD QEDSVRAVIAHEMGHVLGLRHNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILATAKDTLNSTITSLEYMKKAG YKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVEDFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAY LRTLSPTSDDPEYFQKLAKEALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80091; Mature: 80091
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEECCCCCEE FMLVPTAIDSSRSAAPSFFRPQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVD EEEEEHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGERKLESHLDIKDSYVSSLSLRN HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC NSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCEEEEEECHHHHCHHHC SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREG CCCCCCHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH VTYWNRVLGRDILKVETGYKDSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGF HHHHHHHHCCHHEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCE VYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSDQEDSVRAVIAHEMGHVLGLR EEEECCCCCCCCCCCCCCCCEEEECCCCEECEEECCCCCCCCHHHHHHHHHHHHHHHHHH HNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP HCCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILA CCCHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TAKDTLNSTITSLEYMKKAGYKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVE HHHHHHHHHHHHHHHHHHCCCEEECEEEEEEEECCHHHHHHHHHHCCCCCCCEEHHHHHH DFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAYLRTLSPTSDDPEYFQKLAKE HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHH ALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEECCCCCEE FMLVPTAIDSSRSAAPSFFRPQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVD EEEEEHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGERKLESHLDIKDSYVSSLSLRN HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC NSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCEEEEEECHHHHCHHHC SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREG CCCCCCHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH VTYWNRVLGRDILKVETGYKDSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGF HHHHHHHHCCHHEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCE VYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSDQEDSVRAVIAHEMGHVLGLR EEEECCCCCCCCCCCCCCCCEEEECCCCEECEEECCCCCCCCHHHHHHHHHHHHHHHHHH HNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP HCCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILA CCCHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TAKDTLNSTITSLEYMKKAGYKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVE HHHHHHHHHHHHHHHHHHCCCEEECEEEEEEEECCHHHHHHHHHHCCCCCCCEEHHHHHH DFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAYLRTLSPTSDDPEYFQKLAKE HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHH ALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA