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The map label for this gene is hag [H]

Identifier: 42522197

GI number: 42522197

Start: 562130

End: 562954

Strand: Direct

Name: hag [H]

Synonym: Bd0604

Alternate gene names: 42522197

Gene position: 562130-562954 (Clockwise)

Preceding gene: 42522196

Following gene: 42522199

Centisome position: 14.86

GC content: 53.45

Gene sequence:

>825_bases
ATGGGCTTAAGAATCGCAACAAACACCGCATCTATCGCAGCACAACGCGTGCTATCCAAACAACAGAAACGCGCAGAGCA
TGCCGCACAGGCACTGGCTTCTGGTAGCCGTATCGTAAATGCGGCCGACGACGCCGCGGGCTTGGCGATTTCTGAGAACT
TCAAAGGACAATTGAAAGGTATCGGTCAGGCGCGAAACAACGCCAACAATGCCATCTCATTTGTTCAGGTCAGTGAGGGG
GGCTTGAATGAGGTCTCCAACATTCTGGTGCGTCTGCGAGAGCTGGGCGTACAGGCCGCTTCCGATACTGTGAGTGACAC
AGAGAGGGAGTTCCTAAATAAAGAAACCCAACAACTTATCCAAGAGGCCGATCGTATTGCCAAGACCACGGTCTTCGGTA
CGAAGAAAATGCTCGATGGTACTGCCGGAGCGATGGAGTTCCAGGTGGGTGCTTACTCGGATGAGAACAACGTTATTAAA
TTTGAATTTGATGCCGACTCGACGGCGGCGGCACTGGGGATCGACTCGATTGCCATGGCGGACAGGGGGGATGCGCGGGC
ATCTCTGGAGCAGGTCGACCAGGCAATTGAAAAGGTCTCGGGTATGCGAGCGAACTTCGGTGCGATGCAATCGCGAATGG
AGTCCGCAGTGAGCAACCTTGACGTGTCCTATGAAAACTTGTCAGCGGCGAACTCTCGTATCCGCGACACCGACGTGGCG
AAAGAAACGGCCGAAATGACATCTGCAAGTATTCTGCAAAATACAGCGGTGTCGGTTCTGGCTCAAGCCAACCAGTTGCC
ACAAGTGGCAATGAAGTTGGTCTAA

Upstream 100 bases:

>100_bases
GCGGATTTCGGGTGTTCGAAGGGTAAGTGGTGCTACCTTAGATCATTTTAGATTCCACACAAAGCCAGCGGCTCGGGTCT
CTCATCCCAAGGGGGGTTCT

Downstream 100 bases:

>100_bases
TAATATCAGCGTAAAATATTTAAGATTCACATTCGCGATTACGGAATGTCGGGAGAAGCCTGTTCTGGGATAAGGCTTCT
CTCGGGAAGAGGGGTCGCCC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MGLRIATNTASIAAQRVLSKQQKRAEHAAQALASGSRIVNAADDAAGLAISENFKGQLKGIGQARNNANNAISFVQVSEG
GLNEVSNILVRLRELGVQAASDTVSDTEREFLNKETQQLIQEADRIAKTTVFGTKKMLDGTAGAMEFQVGAYSDENNVIK
FEFDADSTAAALGIDSIAMADRGDARASLEQVDQAIEKVSGMRANFGAMQSRMESAVSNLDVSYENLSAANSRIRDTDVA
KETAEMTSASILQNTAVSVLAQANQLPQVAMKLV

Sequences:

>Translated_274_residues
MGLRIATNTASIAAQRVLSKQQKRAEHAAQALASGSRIVNAADDAAGLAISENFKGQLKGIGQARNNANNAISFVQVSEG
GLNEVSNILVRLRELGVQAASDTVSDTEREFLNKETQQLIQEADRIAKTTVFGTKKMLDGTAGAMEFQVGAYSDENNVIK
FEFDADSTAAALGIDSIAMADRGDARASLEQVDQAIEKVSGMRANFGAMQSRMESAVSNLDVSYENLSAANSRIRDTDVA
KETAEMTSASILQNTAVSVLAQANQLPQVAMKLV
>Mature_273_residues
GLRIATNTASIAAQRVLSKQQKRAEHAAQALASGSRIVNAADDAAGLAISENFKGQLKGIGQARNNANNAISFVQVSEGG
LNEVSNILVRLRELGVQAASDTVSDTEREFLNKETQQLIQEADRIAKTTVFGTKKMLDGTAGAMEFQVGAYSDENNVIKF
EFDADSTAAALGIDSIAMADRGDARASLEQVDQAIEKVSGMRANFGAMQSRMESAVSNLDVSYENLSAANSRIRDTDVAK
ETAEMTSASILQNTAVSVLAQANQLPQVAMKLV

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=180, Percent_Identity=36.6666666666667, Blast_Score=97, Evalue=9e-22,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 29089; Mature: 28958

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRIATNTASIAAQRVLSKQQKRAEHAAQALASGSRIVNAADDAAGLAISENFKGQLKG
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCHHHHH
IGQARNNANNAISFVQVSEGGLNEVSNILVRLRELGVQAASDTVSDTEREFLNKETQQLI
HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHH
QEADRIAKTTVFGTKKMLDGTAGAMEFQVGAYSDENNVIKFEFDADSTAAALGIDSIAMA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHCHHHHHHC
DRGDARASLEQVDQAIEKVSGMRANFGAMQSRMESAVSNLDVSYENLSAANSRIRDTDVA
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KETAEMTSASILQNTAVSVLAQANQLPQVAMKLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLRIATNTASIAAQRVLSKQQKRAEHAAQALASGSRIVNAADDAAGLAISENFKGQLKG
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCHHHHH
IGQARNNANNAISFVQVSEGGLNEVSNILVRLRELGVQAASDTVSDTEREFLNKETQQLI
HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHH
QEADRIAKTTVFGTKKMLDGTAGAMEFQVGAYSDENNVIKFEFDADSTAAALGIDSIAMA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHCHHHHHHC
DRGDARASLEQVDQAIEKVSGMRANFGAMQSRMESAVSNLDVSYENLSAANSRIRDTDVA
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KETAEMTSASILQNTAVSVLAQANQLPQVAMKLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1479346; 11058132 [H]