| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522196
Identifier: 42522196
GI number: 42522196
Start: 560718
End: 561668
Strand: Direct
Name: 42522196
Synonym: Bd0603
Alternate gene names: NA
Gene position: 560718-561668 (Clockwise)
Preceding gene: 42522195
Following gene: 42522197
Centisome position: 14.82
GC content: 39.54
Gene sequence:
>951_bases ATGGAACGACTTCTGGTAAGTTTACTTCTGATGTTTTGCGTTGGTTGCAGCTTTGCAAAGGATGATTCCGCAACTTATCA TCAGGAAAATTTGAATACAAATGTTGAGTATCTTTCACTCAAACAACTTGTAAAAGTGGGAACAGTTCTTGATCTTGTCA ATTTTCTGAATACAACTCAGTTCAGAATGAACGAGGAACAAGAGAAAGAGCTTTTTGAGGCTTCTGTAAATCGTGGGAGT GCTGAGATATTTGCGAATCTTATGAGGAGAGGATCTTTCAAGTCTGTATTTTCTAACGGTTCATTTGTTCTTTCTCAGAA GAAGATGAACCTCGATATCCGGGCGGTTCTTACTTCGCATTTATTTTCAGAGCTTTTGAACACTGGAGAAAGAAAATCAA TGACTTGTTCTGAGGTACTTACACAAGTCTTTTTTTTAAGATGGGCAAATGTTGGAACCGCATCGCAACTTCAGAAATTA GGTTTGGAAAAGACTGCTGAATCTGATTGCGCACAGATTGATCCAAAGCTCGTAGGATATTTGTATAGAAATGAACTAGC ATTCTTGTATCTTAACTCGCAATCCACACCCGAATTATTTGCAAAGCTGGTTCATATCAAAAAAGTAGACCGCAGGAGTT ATCTTGTCGGCAACTTTAGTTGGGGACAGCTTTTGATATCTCCAATAATGGTGCTCAACAGTCTTCCTGGTAGAATAGAC GACGAACTACTTAAGTCGCTTTCTAAAGACCTTGAAAGCTCTTTGGAAGAGTCCGCAGATGTTGCGTATTACGTTTTAGC CAGGTCAGGGGCTTATAGAGTTGGAAGGCTATCAAACAAGCTGGAGCTGGTTTCTTTGGAAGAAAATTTGATTTCAGAGC TAATACAGCAGAATGCAGAGTTTGTTTTCGATCGCCATGTGCCAGTAGATCAAGATATAAAGCTTCCGTAG
Upstream 100 bases:
>100_bases TTCAGACTTCGTCGGAATGGATGACTCCGATGAGAGGCGCGATACTATTGCCACTTTGACTGAGATTCCTGATTTCTTTA TTTGCCAGGGAGCAGAGTAA
Downstream 100 bases:
>100_bases CTATGTAACATAAGTCTTCGATAAAACATCGTTTTTTAGCCCTTGGTCTGGCCCGTACTGGACCTTGGTCAAAAATTTTT GAGTCCTTAATTTCCAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MERLLVSLLLMFCVGCSFAKDDSATYHQENLNTNVEYLSLKQLVKVGTVLDLVNFLNTTQFRMNEEQEKELFEASVNRGS AEIFANLMRRGSFKSVFSNGSFVLSQKKMNLDIRAVLTSHLFSELLNTGERKSMTCSEVLTQVFFLRWANVGTASQLQKL GLEKTAESDCAQIDPKLVGYLYRNELAFLYLNSQSTPELFAKLVHIKKVDRRSYLVGNFSWGQLLISPIMVLNSLPGRID DELLKSLSKDLESSLEESADVAYYVLARSGAYRVGRLSNKLELVSLEENLISELIQQNAEFVFDRHVPVDQDIKLP
Sequences:
>Translated_316_residues MERLLVSLLLMFCVGCSFAKDDSATYHQENLNTNVEYLSLKQLVKVGTVLDLVNFLNTTQFRMNEEQEKELFEASVNRGS AEIFANLMRRGSFKSVFSNGSFVLSQKKMNLDIRAVLTSHLFSELLNTGERKSMTCSEVLTQVFFLRWANVGTASQLQKL GLEKTAESDCAQIDPKLVGYLYRNELAFLYLNSQSTPELFAKLVHIKKVDRRSYLVGNFSWGQLLISPIMVLNSLPGRID DELLKSLSKDLESSLEESADVAYYVLARSGAYRVGRLSNKLELVSLEENLISELIQQNAEFVFDRHVPVDQDIKLP >Mature_316_residues MERLLVSLLLMFCVGCSFAKDDSATYHQENLNTNVEYLSLKQLVKVGTVLDLVNFLNTTQFRMNEEQEKELFEASVNRGS AEIFANLMRRGSFKSVFSNGSFVLSQKKMNLDIRAVLTSHLFSELLNTGERKSMTCSEVLTQVFFLRWANVGTASQLQKL GLEKTAESDCAQIDPKLVGYLYRNELAFLYLNSQSTPELFAKLVHIKKVDRRSYLVGNFSWGQLLISPIMVLNSLPGRID DELLKSLSKDLESSLEESADVAYYVLARSGAYRVGRLSNKLELVSLEENLISELIQQNAEFVFDRHVPVDQDIKLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35805; Mature: 35805
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLLVSLLLMFCVGCSFAKDDSATYHQENLNTNVEYLSLKQLVKVGTVLDLVNFLNTTQ CHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH FRMNEEQEKELFEASVNRGSAEIFANLMRRGSFKSVFSNGSFVLSQKKMNLDIRAVLTSH HHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCEEEEHHHCCCHHHHHHHHH LFSELLNTGERKSMTCSEVLTQVFFLRWANVGTASQLQKLGLEKTAESDCAQIDPKLVGY HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCHHHHCCHHHHHH LYRNELAFLYLNSQSTPELFAKLVHIKKVDRRSYLVGNFSWGQLLISPIMVLNSLPGRID HHHCCEEEEEECCCCCHHHHHHHHHHHHHHCHHEEEECCCHHHHHHHHHHHHHCCCCCCC DELLKSLSKDLESSLEESADVAYYVLARSGAYRVGRLSNKLELVSLEENLISELIQQNAE HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCEEEEEHHHHHHHHHHHCCHH FVFDRHVPVDQDIKLP EEEECCCCCCCCCCCC >Mature Secondary Structure MERLLVSLLLMFCVGCSFAKDDSATYHQENLNTNVEYLSLKQLVKVGTVLDLVNFLNTTQ CHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH FRMNEEQEKELFEASVNRGSAEIFANLMRRGSFKSVFSNGSFVLSQKKMNLDIRAVLTSH HHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCEEEEHHHCCCHHHHHHHHH LFSELLNTGERKSMTCSEVLTQVFFLRWANVGTASQLQKLGLEKTAESDCAQIDPKLVGY HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCHHHHCCHHHHHH LYRNELAFLYLNSQSTPELFAKLVHIKKVDRRSYLVGNFSWGQLLISPIMVLNSLPGRID HHHCCEEEEEECCCCCHHHHHHHHHHHHHHCHHEEEECCCHHHHHHHHHHHHHCCCCCCC DELLKSLSKDLESSLEESADVAYYVLARSGAYRVGRLSNKLELVSLEENLISELIQQNAE HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCEEEEEHHHHHHHHHHHCCHH FVFDRHVPVDQDIKLP EEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA