Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522193

Identifier: 42522193

GI number: 42522193

Start: 557561

End: 558634

Strand: Direct

Name: 42522193

Synonym: Bd0600

Alternate gene names: NA

Gene position: 557561-558634 (Clockwise)

Preceding gene: 42522192

Following gene: 42522194

Centisome position: 14.74

GC content: 54.56

Gene sequence:

>1074_bases
TTGCCAAGGCCCAGAGCCTTTGTTACTTCCAGCTGCATGAAAAAAATCGCTCTGTTCATTTCAGTTCTTCTGGTATCACT
GACAGCCGCGGCAAAGGTTCAGCATCTTCGTTTGGGAACCGGCAAGGTGATTGCCTATGAGCACATCCAAACCAACAAAG
CCTCTTCGACATTGATTTTACTTCCTGGGGTCAATCGCTCCCTCAGCGCCGACGATCGCTCCGTGCAACTGCTGGCAGAG
CAGGGCTGGAATTTGTTGTTGCCGTCACTTCCTGCGCATCCGCTTTCCATTGAGGGGCTTTCCGCGGGTGAAACGCCGTA
CTTCTTGTATGACTCTTCACTTCGCGCAGTGGATTTCGCCTCGGACATTGAAAAGCTTGTCGCGGCTTTGAAAATCAAAC
AGGCCATTCCGGTGACGTTGTCTTACACGTCAACTGTGGGTGCTTACTTGAATCCAAAACTTTTTCCGCATGTGATTGAA
ACAGTGCCGTTGGGCATCCCCACGGAAACAAATCCTGAAGCCGCCCGCAATGCCCAGCTGTGGGAAAACTGGCTGCGTAT
GAATCCGGTGATGGCTCCCTTTTGGATTCGTCAGTCCCGCGACCAGGCATACAGCAAACACTGGGGGGCGGTGGTGGATG
CGAACCTTGCCAGGGATCCGGACTATTACGGGGCAAATCCGCGCATCGCGGATATCAAGTCGGGATATGTGACGATTGCC
CGGGCCGCCGAGGACTTTGATCTGACGAAGGTGGATTATAAGGCGAACGCTGTGACTCGGGACTTTGTTCTGGCGGGTCA
GGAAAATTCAGAACGTCTAAAAAATCAGATTGTGGCTTTGAAGAACTATCTGCGCTCGGGAAAACCCGCGCGTGTGATGG
TGGTGGCGAATGCGGGGCATGTGCTGCCGTCGGAGTCTCCGTCAGTGTATGCGGCGGCGATCGGGGTGCTGGCGCAGCAG
CCTGTGTCTGCGGGAGTGTCGTTCATGGTTGTGCGCAAGGCTGCGGATGTGCACAAAGCCCAGTGGCAGGGGGCTTCGGA
ATTGGAAGCCTGGATGGATGGGATCGTGAAATAG

Upstream 100 bases:

>100_bases
AGAAGCGGCCCGTGCGCGCGAGCGCCGAGGTTTCCCAGGACTTAAAAAGTCCATTCTGGAAGAGCAGCAAGAATAGCATA
AAAGCTCTATTTTTTAGCTG

Downstream 100 bases:

>100_bases
CGGCTTTAAATGTCGCTGTGTCAAAGTGATACACAGTTTATTCTGCTGAAATCGTTTATATTGCATTTTGACTAGCATCG
AAATTGCTGAATGAAGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MPRPRAFVTSSCMKKIALFISVLLVSLTAAAKVQHLRLGTGKVIAYEHIQTNKASSTLILLPGVNRSLSADDRSVQLLAE
QGWNLLLPSLPAHPLSIEGLSAGETPYFLYDSSLRAVDFASDIEKLVAALKIKQAIPVTLSYTSTVGAYLNPKLFPHVIE
TVPLGIPTETNPEAARNAQLWENWLRMNPVMAPFWIRQSRDQAYSKHWGAVVDANLARDPDYYGANPRIADIKSGYVTIA
RAAEDFDLTKVDYKANAVTRDFVLAGQENSERLKNQIVALKNYLRSGKPARVMVVANAGHVLPSESPSVYAAAIGVLAQQ
PVSAGVSFMVVRKAADVHKAQWQGASELEAWMDGIVK

Sequences:

>Translated_357_residues
MPRPRAFVTSSCMKKIALFISVLLVSLTAAAKVQHLRLGTGKVIAYEHIQTNKASSTLILLPGVNRSLSADDRSVQLLAE
QGWNLLLPSLPAHPLSIEGLSAGETPYFLYDSSLRAVDFASDIEKLVAALKIKQAIPVTLSYTSTVGAYLNPKLFPHVIE
TVPLGIPTETNPEAARNAQLWENWLRMNPVMAPFWIRQSRDQAYSKHWGAVVDANLARDPDYYGANPRIADIKSGYVTIA
RAAEDFDLTKVDYKANAVTRDFVLAGQENSERLKNQIVALKNYLRSGKPARVMVVANAGHVLPSESPSVYAAAIGVLAQQ
PVSAGVSFMVVRKAADVHKAQWQGASELEAWMDGIVK
>Mature_356_residues
PRPRAFVTSSCMKKIALFISVLLVSLTAAAKVQHLRLGTGKVIAYEHIQTNKASSTLILLPGVNRSLSADDRSVQLLAEQ
GWNLLLPSLPAHPLSIEGLSAGETPYFLYDSSLRAVDFASDIEKLVAALKIKQAIPVTLSYTSTVGAYLNPKLFPHVIET
VPLGIPTETNPEAARNAQLWENWLRMNPVMAPFWIRQSRDQAYSKHWGAVVDANLARDPDYYGANPRIADIKSGYVTIAR
AAEDFDLTKVDYKANAVTRDFVLAGQENSERLKNQIVALKNYLRSGKPARVMVVANAGHVLPSESPSVYAAAIGVLAQQP
VSAGVSFMVVRKAADVHKAQWQGASELEAWMDGIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38973; Mature: 38842

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPRAFVTSSCMKKIALFISVLLVSLTAAAKVQHLRLGTGKVIAYEHIQTNKASSTLIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCEEEE
LPGVNRSLSADDRSVQLLAEQGWNLLLPSLPAHPLSIEGLSAGETPYFLYDSSLRAVDFA
ECCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCEECCCCCCCCCEEEECCCCCCHHHH
SDIEKLVAALKIKQAIPVTLSYTSTVGAYLNPKLFPHVIETVPLGIPTETNPEAARNAQL
HHHHHHHHHHHHHHCCCEEEEECCHHCHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
WENWLRMNPVMAPFWIRQSRDQAYSKHWGAVVDANLARDPDYYGANPRIADIKSGYVTIA
HHHHHHCCCCCCHHHHHCCHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEE
RAAEDFDLTKVDYKANAVTRDFVLAGQENSERLKNQIVALKNYLRSGKPARVMVVANAGH
ECCCCCCCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
VLPSESPSVYAAAIGVLAQQPVSAGVSFMVVRKAADVHKAQWQGASELEAWMDGIVK
CCCCCCCCHHHHHHHHHHHCHHHCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PRPRAFVTSSCMKKIALFISVLLVSLTAAAKVQHLRLGTGKVIAYEHIQTNKASSTLIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCEEEE
LPGVNRSLSADDRSVQLLAEQGWNLLLPSLPAHPLSIEGLSAGETPYFLYDSSLRAVDFA
ECCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCEECCCCCCCCCEEEECCCCCCHHHH
SDIEKLVAALKIKQAIPVTLSYTSTVGAYLNPKLFPHVIETVPLGIPTETNPEAARNAQL
HHHHHHHHHHHHHHCCCEEEEECCHHCHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
WENWLRMNPVMAPFWIRQSRDQAYSKHWGAVVDANLARDPDYYGANPRIADIKSGYVTIA
HHHHHHCCCCCCHHHHHCCHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEE
RAAEDFDLTKVDYKANAVTRDFVLAGQENSERLKNQIVALKNYLRSGKPARVMVVANAGH
ECCCCCCCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
VLPSESPSVYAAAIGVLAQQPVSAGVSFMVVRKAADVHKAQWQGASELEAWMDGIVK
CCCCCCCCHHHHHHHHHHHCHHHCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA