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The map label for this gene is 42522191

Identifier: 42522191

GI number: 42522191

Start: 555972

End: 556712

Strand: Direct

Name: 42522191

Synonym: Bd0597

Alternate gene names: NA

Gene position: 555972-556712 (Clockwise)

Preceding gene: 42522189

Following gene: 42522192

Centisome position: 14.7

GC content: 50.47

Gene sequence:

>741_bases
ATGAATGTAATCAAGGCGTTCTTTCTAGCGGCAGTGCTGCTGCTCACAAGCTCCCGGTCCCATGCGGAACGCTGGGTGGT
GATGACGTTGGAATGGCCACCTTTCACCTGCTCTCGCTGCCCCGAAAACGGAGCGGCGGCCAAGGCCTTGAAAGACACTC
TCAACAAGGCCGGTGTGAGTGTCGAGTTTGTATTCTATCCTTGGACTCAGACACAGAAGAAAGCCGAACAGCCCGATGTG
ATTGGCTATTTTCCCTCTTGGAAAGATGTACTGCCGGGCTTTACGCGTTCCGAGCCCCTGTTTAAATCTCCGTTGGGTTT
TATCCAGCAAAGAAGCAAGCCTCTGGTCTGGTCAAAATTGCCCGATCTCAAGGGGAAAAAGCTGGGGATCACCGAAGGGT
ACAGCAACACCACAGAGTTCAATCGTCTGGTGAAGGAAAAAGTACTGACTGTCGAACCTGTGCAAAGTGACGACACCAAC
GTGCGACGTGTGGCTCTGGGCCAGATTGATGGCGCCTTGATGGATATTAACAATGCCCGGTATCTGATTTCGAAAGCGCA
TTCCCAATATGCGGGCAGGGTGTCCGTCAATCAGAGGATTCTGGAAGACAAAGAGCTGTATTTTGCATTCAACAGCCACA
ATCGTGATAAGGCAGCTAAGCTAAAGAAGGCTCTGGAGAACGTCAATTATCAGCGTATGGTGGATGACTACTTGCTGAAG
TACCTATTGCGCAATGATTAA

Upstream 100 bases:

>100_bases
TTGATTAGCCTATGCATTTTTAGTGATATCGTATACGTCTTCCTAGTTCAATCAGCGAGTGACATACAAGCAGGAAACTA
GGCTTGGGAGTAGAGGTTAA

Downstream 100 bases:

>100_bases
ACTTTTGCCATCAGTGTAAGCCTTACACGCGCTTACTGTATTTTTCCGGCGAGGCCGGAAATCCCCTCCGGAATTTGCTA
TAAATAGCGGGAACAAAGGA

Product: ABC-type transporter, periplasmic component

Products: NA

Alternate protein names: ABC Transporter; Succinate Dehydrogenase; ABC-Type Amino Acid Transport Periplasmic Protein; ABC-Type Transporter Periplasmic Component

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNVIKAFFLAAVLLLTSSRSHAERWVVMTLEWPPFTCSRCPENGAAAKALKDTLNKAGVSVEFVFYPWTQTQKKAEQPDV
IGYFPSWKDVLPGFTRSEPLFKSPLGFIQQRSKPLVWSKLPDLKGKKLGITEGYSNTTEFNRLVKEKVLTVEPVQSDDTN
VRRVALGQIDGALMDINNARYLISKAHSQYAGRVSVNQRILEDKELYFAFNSHNRDKAAKLKKALENVNYQRMVDDYLLK
YLLRND

Sequences:

>Translated_246_residues
MNVIKAFFLAAVLLLTSSRSHAERWVVMTLEWPPFTCSRCPENGAAAKALKDTLNKAGVSVEFVFYPWTQTQKKAEQPDV
IGYFPSWKDVLPGFTRSEPLFKSPLGFIQQRSKPLVWSKLPDLKGKKLGITEGYSNTTEFNRLVKEKVLTVEPVQSDDTN
VRRVALGQIDGALMDINNARYLISKAHSQYAGRVSVNQRILEDKELYFAFNSHNRDKAAKLKKALENVNYQRMVDDYLLK
YLLRND
>Mature_246_residues
MNVIKAFFLAAVLLLTSSRSHAERWVVMTLEWPPFTCSRCPENGAAAKALKDTLNKAGVSVEFVFYPWTQTQKKAEQPDV
IGYFPSWKDVLPGFTRSEPLFKSPLGFIQQRSKPLVWSKLPDLKGKKLGITEGYSNTTEFNRLVKEKVLTVEPVQSDDTN
VRRVALGQIDGALMDINNARYLISKAHSQYAGRVSVNQRILEDKELYFAFNSHNRDKAAKLKKALENVNYQRMVDDYLLK
YLLRND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28080; Mature: 28080

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIKAFFLAAVLLLTSSRSHAERWVVMTLEWPPFTCSRCPENGAAAKALKDTLNKAGVS
CHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCE
VEFVFYPWTQTQKKAEQPDVIGYFPSWKDVLPGFTRSEPLFKSPLGFIQQRSKPLVWSKL
EEEEEECCCCCHHHCCCCCEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHCC
PDLKGKKLGITEGYSNTTEFNRLVKEKVLTVEPVQSDDTNVRRVALGQIDGALMDINNAR
CCCCCCEECCCCCCCCHHHHHHHHHHHHCEECCCCCCCCCCEEEEHHHCCCEEEECCCCH
YLISKAHSQYAGRVSVNQRILEDKELYFAFNSHNRDKAAKLKKALENVNYQRMVDDYLLK
HHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
YLLRND
HHHHCC
>Mature Secondary Structure
MNVIKAFFLAAVLLLTSSRSHAERWVVMTLEWPPFTCSRCPENGAAAKALKDTLNKAGVS
CHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCE
VEFVFYPWTQTQKKAEQPDVIGYFPSWKDVLPGFTRSEPLFKSPLGFIQQRSKPLVWSKL
EEEEEECCCCCHHHCCCCCEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHCC
PDLKGKKLGITEGYSNTTEFNRLVKEKVLTVEPVQSDDTNVRRVALGQIDGALMDINNAR
CCCCCCEECCCCCCCCHHHHHHHHHHHHCEECCCCCCCCCCEEEEHHHCCCEEEECCCCH
YLISKAHSQYAGRVSVNQRILEDKELYFAFNSHNRDKAAKLKKALENVNYQRMVDDYLLK
HHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
YLLRND
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA