Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522149

Identifier: 42522149

GI number: 42522149

Start: 510662

End: 510979

Strand: Direct

Name: 42522149

Synonym: Bd0550

Alternate gene names: NA

Gene position: 510662-510979 (Clockwise)

Preceding gene: 42522148

Following gene: 42522151

Centisome position: 13.5

GC content: 46.86

Gene sequence:

>318_bases
ATGAAGCACGAAGAAAACCCCTGGTCCAAAGGCATCGTTCTGATCTGCACGAAATGCCATAAATCCATCAGCCCCAAACT
GCTGGAAGAAGAAGGCAACAGTGCCGACAATCTGAAAATGTTCCTGAAAAAGTCTTTCAAGGAAAGTGGAGACGGCTCCA
AGATCCGTGTGGTGACGACAAGCTGTCTGGATGTTTGTATCGACGACACTCAGGCGGTGACATTTGCCTCTACTGAAGGT
GAAACAGAAACGTTCGCGATCCATCCAGAGAAGGACCGCGAAAAGCTTCTGAAACATCTGTATCAAAAGATCAAATAG

Upstream 100 bases:

>100_bases
AAGTGCTTCCCTTTGAAAAAGCACGTAAAATTTATTATATGAACGAGATCCCACGCAGTGATTTGGGAAAAATTCTGTGG
GCGGAGCTGAGGAGAAAACT

Downstream 100 bases:

>100_bases
CTATTATTGGAAGGTTCCGTTGAAGGCGGAGCCTGACACTCCAGCGACTGCGGAAACAGTGAGGTCCAGCATCTTGCCGT
TCAAGCCGGCGGTTTGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTTSCLDVCIDDTQAVTFASTEG
ETETFAIHPEKDREKLLKHLYQKIK

Sequences:

>Translated_105_residues
MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTTSCLDVCIDDTQAVTFASTEG
ETETFAIHPEKDREKLLKHLYQKIK
>Mature_105_residues
MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTTSCLDVCIDDTQAVTFASTEG
ETETFAIHPEKDREKLLKHLYQKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11884; Mature: 11884

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTT
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEH
SCLDVCIDDTQAVTFASTEGETETFAIHPEKDREKLLKHLYQKIK
HHHHHHCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTT
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEH
SCLDVCIDDTQAVTFASTEGETETFAIHPEKDREKLLKHLYQKIK
HHHHHHCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA