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The map label for this gene is fliW

Identifier: 42522143

GI number: 42522143

Start: 504657

End: 505184

Strand: Direct

Name: fliW

Synonym: Bd0543

Alternate gene names: 42522143

Gene position: 504657-505184 (Clockwise)

Preceding gene: 42522142

Following gene: 42522146

Centisome position: 13.34

GC content: 50.57

Gene sequence:

>528_bases
ATGATCATTTCAACATCGCGATTCGGCCAAGTTGAGCTGAAACAGGAAGATGTTCTGACTTTCACCGAAGGCCTGTTGGG
CTTCGCTGATTTGCGCAAGTTCGTTCTTCTTGACGATCCGAATGATGAAATCTTCGCTTGGTTGCAGAGCTGCGAAGCGC
CTGCAATTGCCTTCCCGGTTCTTGAGCCTGAATTGTTCGCTCCTCAGTACAAAGCAACCCTGACCAAAGGGGACATGGAA
GCTTTGAAACTGACGGCTCAGGACAAAGCCCGCTACTTCTCTATCGTGACTATCCCGGATGATCCTACTTTGATGACTGC
GAACCTGAAAGCTCCAGTCGTTGTGAACATTGAAGCCCGTACGGCTCGTCAGTGTGTTCTTCAGGATAACAACCTGGCTA
TCCGCGAGCCTATCTTCACCAAGCTGCAACAGCGTGTGGTGCAGAACCCGGCTGTCGCTATCAAAAATCAATCCACCGGC
ATCGATGTGGCAACCAAGCTGCATGTTGTTCGCGACGCTGAACTTTAA

Upstream 100 bases:

>100_bases
CTCCCTAGATTTAGGTCCAGATTTATACATGTATTCACCATCATAGCGCCTTGGTGTGTCTAAAATAAGGGTGAATCCTG
AGTACCTTTTGGGAGGATGA

Downstream 100 bases:

>100_bases
TTTTTAAAGATTCAGAAAAAGAAAAAGGAGCCCCCGAGGCTCCTTTTTTTATTTGTGCCTGCAGGGTTATTCCAAAGCTG
TCAGTTCGGCGTTTTTTTCG

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MIISTSRFGQVELKQEDVLTFTEGLLGFADLRKFVLLDDPNDEIFAWLQSCEAPAIAFPVLEPELFAPQYKATLTKGDME
ALKLTAQDKARYFSIVTIPDDPTLMTANLKAPVVVNIEARTARQCVLQDNNLAIREPIFTKLQQRVVQNPAVAIKNQSTG
IDVATKLHVVRDAEL

Sequences:

>Translated_175_residues
MIISTSRFGQVELKQEDVLTFTEGLLGFADLRKFVLLDDPNDEIFAWLQSCEAPAIAFPVLEPELFAPQYKATLTKGDME
ALKLTAQDKARYFSIVTIPDDPTLMTANLKAPVVVNIEARTARQCVLQDNNLAIREPIFTKLQQRVVQNPAVAIKNQSTG
IDVATKLHVVRDAEL
>Mature_175_residues
MIISTSRFGQVELKQEDVLTFTEGLLGFADLRKFVLLDDPNDEIFAWLQSCEAPAIAFPVLEPELFAPQYKATLTKGDME
ALKLTAQDKARYFSIVTIPDDPTLMTANLKAPVVVNIEARTARQCVLQDNNLAIREPIFTKLQQRVVQNPAVAIKNQSTG
IDVATKLHVVRDAEL

Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum

COG id: COG1699

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliW family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLIW_BDEBA (Q6MQD1)

Other databases:

- EMBL:   BX842647
- RefSeq:   NP_967523.1
- ProteinModelPortal:   Q6MQD1
- SMR:   Q6MQD1
- GeneID:   2734345
- GenomeReviews:   BX842601_GR
- KEGG:   bba:Bd0543
- NMPDR:   fig|264462.1.peg.493
- OMA:   ISRNESH
- BioCyc:   BBAC264462:BD0543-MONOMER
- GO:   GO:0005737
- GO:   GO:0019861
- HAMAP:   MF_01185
- InterPro:   IPR003775

Pfam domain/function: PF02623 FliW

EC number: NA

Molecular weight: Translated: 19485; Mature: 19485

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISTSRFGQVELKQEDVLTFTEGLLGFADLRKFVLLDDPNDEIFAWLQSCEAPAIAFPV
CEECCCCCCEEEECCCHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCEEEEEC
LEPELFAPQYKATLTKGDMEALKLTAQDKARYFSIVTIPDDPTLMTANLKAPVVVNIEAR
CCCHHCCCCHHEEECCCCHHHEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEECC
TARQCVLQDNNLAIREPIFTKLQQRVVQNPAVAIKNQSTGIDVATKLHVVRDAEL
CHHEEEEECCCEEEECHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEECCC
>Mature Secondary Structure
MIISTSRFGQVELKQEDVLTFTEGLLGFADLRKFVLLDDPNDEIFAWLQSCEAPAIAFPV
CEECCCCCCEEEECCCHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCEEEEEC
LEPELFAPQYKATLTKGDMEALKLTAQDKARYFSIVTIPDDPTLMTANLKAPVVVNIEAR
CCCHHCCCCHHEEECCCCHHHEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEECC
TARQCVLQDNNLAIREPIFTKLQQRVVQNPAVAIKNQSTGIDVATKLHVVRDAEL
CHHEEEEECCCEEEECHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA