| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is flgI
Identifier: 42522137
GI number: 42522137
Start: 498325
End: 499332
Strand: Direct
Name: flgI
Synonym: Bd0535
Alternate gene names: 42522137
Gene position: 498325-499332 (Clockwise)
Preceding gene: 42522136
Following gene: 42522138
Centisome position: 13.17
GC content: 50.6
Gene sequence:
>1008_bases ATGAATAAAATCACAAACTTTCTGATTCTTTCCGCTGTCTTGTTTTTCTCTTTGATCGAATCGGCCAACGCCGCCCGCTT GAAGGACATCGCCAGCATTCGTGGCGTGCGTGAAAATCAGCTGATTGGCTACGGCATCGTCGTGGGCCTTAAAGGCACCG GCGATGGCAAGAATGAATTTATGAGCAAGAGCATGGTGCGTATGCTCGACAAGCTGGGAATGAAACTTGATAACGTCGAT TTTGCCAGCAAAAACGTGGCGGCGGTGATCGTGACGGCGACCATGCCGGCATTCGGTAAAGCCGGAAATCCGATTGACAT CAATGTCAGTGCAATCGGTGAAGCGTCTTCCTTGCAGGGGGGGACTCTGCTGCAGACCCCTTTGCGCGCTGCCAATGAGC AGGTGTTTGCCGTGGCTCAGGGAAGTATCGTGATTGGTGGTGATGGCAAAGATTCACACACCACTGCGGGCCGTATCCCG AATGGAGCGACGATTGAACGTGATATGACAGCGGATTTTTCTTCAAGAAAGATGTACCGCCTGACTTTGATCAATCCGGA TTTCACGACGGCAGCGCGCTCTGTGCTGACCATCAATAAAGAGCTGGGGGGTCACTATGCTTCAGCAAAGGATTCCGGCA CGATTGATATCATCACACCGTTTGCATATGAGAATCGCGGTGTGGAGCTTTTGGCGACGATTGAATCTATTGAGATCAAT CCCGACATGAAAGCGCGTGTTGTGGTGAATGAAAAAACAGGAACGATTGTTATCGGTGACAAAGTGAAGATCTCACGCGT TGCTATCTCACACGGAGCACTGTCGGTGAAAGTGGGCGATGGCAAAAAAGGTGCGGAAGAAAAAGTGGCGGTTCTCGACA GTGGTGTCAGCGTCGGTGAACTGGTCCAGGCACTTAACAAGCTGGGAGTCTCGCCGAAGGACCTGATTACAATACTTCAG TCCATAAAATCAGCTGGAGCTTTGCACGGGGAACTCGAAGTTTTATGA
Upstream 100 bases:
>100_bases GGGTTGATCCGTCCGGAGGACTTCAATGATGCGGGCATCAACTCGGATAAACTTCTGGATCCACAGTACGATGTGGTTTC TTTAAGAAAGACAAAGAGCA
Downstream 100 bases:
>100_bases GATTTCTGTTTCAGAATGACACAGCATTTAATACAATCAAAGTTATAGTTTCAGACACATGGACGTGTTTGAAACGCGGG GAGGGTGAGAAAGAGATCGC
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNKITNFLILSAVLFFSLIESANAARLKDIASIRGVRENQLIGYGIVVGLKGTGDGKNEFMSKSMVRMLDKLGMKLDNVD FASKNVAAVIVTATMPAFGKAGNPIDINVSAIGEASSLQGGTLLQTPLRAANEQVFAVAQGSIVIGGDGKDSHTTAGRIP NGATIERDMTADFSSRKMYRLTLINPDFTTAARSVLTINKELGGHYASAKDSGTIDIITPFAYENRGVELLATIESIEIN PDMKARVVVNEKTGTIVIGDKVKISRVAISHGALSVKVGDGKKGAEEKVAVLDSGVSVGELVQALNKLGVSPKDLITILQ SIKSAGALHGELEVL
Sequences:
>Translated_335_residues MNKITNFLILSAVLFFSLIESANAARLKDIASIRGVRENQLIGYGIVVGLKGTGDGKNEFMSKSMVRMLDKLGMKLDNVD FASKNVAAVIVTATMPAFGKAGNPIDINVSAIGEASSLQGGTLLQTPLRAANEQVFAVAQGSIVIGGDGKDSHTTAGRIP NGATIERDMTADFSSRKMYRLTLINPDFTTAARSVLTINKELGGHYASAKDSGTIDIITPFAYENRGVELLATIESIEIN PDMKARVVVNEKTGTIVIGDKVKISRVAISHGALSVKVGDGKKGAEEKVAVLDSGVSVGELVQALNKLGVSPKDLITILQ SIKSAGALHGELEVL >Mature_335_residues MNKITNFLILSAVLFFSLIESANAARLKDIASIRGVRENQLIGYGIVVGLKGTGDGKNEFMSKSMVRMLDKLGMKLDNVD FASKNVAAVIVTATMPAFGKAGNPIDINVSAIGEASSLQGGTLLQTPLRAANEQVFAVAQGSIVIGGDGKDSHTTAGRIP NGATIERDMTADFSSRKMYRLTLINPDFTTAARSVLTINKELGGHYASAKDSGTIDIITPFAYENRGVELLATIESIEIN PDMKARVVVNEKTGTIVIGDKVKISRVAISHGALSVKVGDGKKGAEEKVAVLDSGVSVGELVQALNKLGVSPKDLITILQ SIKSAGALHGELEVL
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family
Homologues:
Organism=Escherichia coli, GI1787320, Length=362, Percent_Identity=37.292817679558, Blast_Score=213, Evalue=2e-56,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGI_BDEBA (Q6MQD7)
Other databases:
- EMBL: BX842647 - RefSeq: NP_967517.1 - GeneID: 2734338 - GenomeReviews: BX842601_GR - KEGG: bba:Bd0535 - NMPDR: fig|264462.1.peg.487 - HOGENOM: HBG321070 - OMA: NAVAQMN - PhylomeDB: Q6MQD7 - ProtClustDB: PRK05303 - BioCyc: BBAC264462:BD0535-MONOMER - HAMAP: MF_00416 - InterPro: IPR001782 - PRINTS: PR01010
Pfam domain/function: PF02119 FlgI
EC number: NA
Molecular weight: Translated: 35265; Mature: 35265
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKITNFLILSAVLFFSLIESANAARLKDIASIRGVRENQLIGYGIVVGLKGTGDGKNEF CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHH MSKSMVRMLDKLGMKLDNVDFASKNVAAVIVTATMPAFGKAGNPIDINVSAIGEASSLQG HHHHHHHHHHHHCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC GTLLQTPLRAANEQVFAVAQGSIVIGGDGKDSHTTAGRIPNGATIERDMTADFSSRKMYR CCEECCHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEE LTLINPDFTTAARSVLTINKELGGHYASAKDSGTIDIITPFAYENRGVELLATIESIEIN EEEECCCHHHHHHHHEEEEHHHCCCCCCCCCCCCEEEEECCEECCCCEEEEEEEEEEEEC PDMKARVVVNEKTGTIVIGDKVKISRVAISHGALSVKVGDGKKGAEEKVAVLDSGVSVGE CCCEEEEEEECCCCEEEECCCEEEEEEEEECCEEEEEECCCCCCCCCEEEEEECCCCHHH LVQALNKLGVSPKDLITILQSIKSAGALHGELEVL HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEC >Mature Secondary Structure MNKITNFLILSAVLFFSLIESANAARLKDIASIRGVRENQLIGYGIVVGLKGTGDGKNEF CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHH MSKSMVRMLDKLGMKLDNVDFASKNVAAVIVTATMPAFGKAGNPIDINVSAIGEASSLQG HHHHHHHHHHHHCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC GTLLQTPLRAANEQVFAVAQGSIVIGGDGKDSHTTAGRIPNGATIERDMTADFSSRKMYR CCEECCHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEE LTLINPDFTTAARSVLTINKELGGHYASAKDSGTIDIITPFAYENRGVELLATIESIEIN EEEECCCHHHHHHHHEEEEHHHCCCCCCCCCCCCEEEEECCEECCCCEEEEEEEEEEEEC PDMKARVVVNEKTGTIVIGDKVKISRVAISHGALSVKVGDGKKGAEEKVAVLDSGVSVGE CCCEEEEEEECCCCEEEECCCEEEEEEEEECCEEEEEECCCCCCCCCEEEEEECCCCHHH LVQALNKLGVSPKDLITILQSIKSAGALHGELEVL HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA