| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is flgH
Identifier: 42522136
GI number: 42522136
Start: 497580
End: 498332
Strand: Direct
Name: flgH
Synonym: Bd0534
Alternate gene names: NA
Gene position: 497580-498332 (Clockwise)
Preceding gene: 42522135
Following gene: 42522137
Centisome position: 13.15
GC content: 50.86
Gene sequence:
>753_bases ATGATGAAGATGATTTCTTCTTTCTCAGTTTTGGTTTTGATGGTGTTCACTGCAGGTTGCGCAACCATGCAGGATTTCAT GGCGTCTTTGGACGGCCCGAAAGAGGCACCGGCGCTGAAGGATATCAACACGGCGCCAAGATATTCTGACAACCAGAACA TGGGTGTGCCGACGGATCGTCAGTACAAACGCATGACGAAAAACCGCATGGAAGAAGAATCCGACCTGGGCGCCAACGCC GGATCCATGTGGGTGATGGAAGGCCAGGGGGCTTACCTGTTTGCGCAAAACAAAATGCGCAAAGAAGGGGACCTGTTGAA TGTGACCTTGGATGGTCCGGCCAAAAAACAGGTCGACACCAAAGTGTCAGTGATCAAAAAACTTTTGAAGCAGCTGGAAG AGCAGCAGCAACAGCAGTTGAACAACTCTTTGGTGCAAAATGGGGATGAGGCCTCCCGTGCCCCGGCTTCGGCCGAAGCG GCAAAAAAACCGGAACCTGCCAAAGTGGAGGAAAAGGATGACGGCGCCGCTGATGTGGCGAACATCCCAACCCGTATCGT TGAAAAAATGGCCGATGGCAACTATCGCATCAAAGGTCAGCAGCCGTTCATGATCGGCAAGCGTGAATACAAAGTCATCG TGACGGGGTTGATCCGTCCGGAGGACTTCAATGATGCGGGCATCAACTCGGATAAACTTCTGGATCCACAGTACGATGTG GTTTCTTTAAGAAAGACAAAGAGCAATGAATAA
Upstream 100 bases:
>100_bases AGGACAGTGGCTTTGTTGGGGATCTTATCAAGGTAAAAAATCTGGAAACCCAAAAAGTTCTGTCCGGTCTGGTCACTGAA AAAGGTGTGGTGAAGTTGCA
Downstream 100 bases:
>100_bases AATCACAAACTTTCTGATTCTTTCCGCTGTCTTGTTTTTCTCTTTGATCGAATCGGCCAACGCCGCCCGCTTGAAGGACA TCGCCAGCATTCGTGGCGTG
Product: flagellar L-ring protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MMKMISSFSVLVLMVFTAGCATMQDFMASLDGPKEAPALKDINTAPRYSDNQNMGVPTDRQYKRMTKNRMEEESDLGANA GSMWVMEGQGAYLFAQNKMRKEGDLLNVTLDGPAKKQVDTKVSVIKKLLKQLEEQQQQQLNNSLVQNGDEASRAPASAEA AKKPEPAKVEEKDDGAADVANIPTRIVEKMADGNYRIKGQQPFMIGKREYKVIVTGLIRPEDFNDAGINSDKLLDPQYDV VSLRKTKSNE
Sequences:
>Translated_250_residues MMKMISSFSVLVLMVFTAGCATMQDFMASLDGPKEAPALKDINTAPRYSDNQNMGVPTDRQYKRMTKNRMEEESDLGANA GSMWVMEGQGAYLFAQNKMRKEGDLLNVTLDGPAKKQVDTKVSVIKKLLKQLEEQQQQQLNNSLVQNGDEASRAPASAEA AKKPEPAKVEEKDDGAADVANIPTRIVEKMADGNYRIKGQQPFMIGKREYKVIVTGLIRPEDFNDAGINSDKLLDPQYDV VSLRKTKSNE >Mature_250_residues MMKMISSFSVLVLMVFTAGCATMQDFMASLDGPKEAPALKDINTAPRYSDNQNMGVPTDRQYKRMTKNRMEEESDLGANA GSMWVMEGQGAYLFAQNKMRKEGDLLNVTLDGPAKKQVDTKVSVIKKLLKQLEEQQQQQLNNSLVQNGDEASRAPASAEA AKKPEPAKVEEKDDGAADVANIPTRIVEKMADGNYRIKGQQPFMIGKREYKVIVTGLIRPEDFNDAGINSDKLLDPQYDV VSLRKTKSNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27741; Mature: 27741
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKMISSFSVLVLMVFTAGCATMQDFMASLDGPKEAPALKDINTAPRYSDNQNMGVPTDR CCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QYKRMTKNRMEEESDLGANAGSMWVMEGQGAYLFAQNKMRKEGDLLNVTLDGPAKKQVDT HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEEEECCCCHHHHHH KVSVIKKLLKQLEEQQQQQLNNSLVQNGDEASRAPASAEAAKKPEPAKVEEKDDGAADVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHH NIPTRIVEKMADGNYRIKGQQPFMIGKREYKVIVTGLIRPEDFNDAGINSDKLLDPQYDV HHHHHHHHHHHCCCEEECCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHH VSLRKTKSNE HHHHHCCCCC >Mature Secondary Structure MMKMISSFSVLVLMVFTAGCATMQDFMASLDGPKEAPALKDINTAPRYSDNQNMGVPTDR CCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QYKRMTKNRMEEESDLGANAGSMWVMEGQGAYLFAQNKMRKEGDLLNVTLDGPAKKQVDT HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEEEECCCCHHHHHH KVSVIKKLLKQLEEQQQQQLNNSLVQNGDEASRAPASAEAAKKPEPAKVEEKDDGAADVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHH NIPTRIVEKMADGNYRIKGQQPFMIGKREYKVIVTGLIRPEDFNDAGINSDKLLDPQYDV HHHHHHHHHHHCCCEEECCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHH VSLRKTKSNE HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA