Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522128

Identifier: 42522128

GI number: 42522128

Start: 489744

End: 491129

Strand: Direct

Name: 42522128

Synonym: Bd0524

Alternate gene names: NA

Gene position: 489744-491129 (Clockwise)

Preceding gene: 42522127

Following gene: 42522130

Centisome position: 12.95

GC content: 56.06

Gene sequence:

>1386_bases
TTGGAATTACCGAACAGTTTATTTATGGGAATGAGATCTTTTCTATCAATCAGCATGTTGTTCGCGCTTTCGATAAGTCT
CTTCTCTGTGGAGGCCGAGGCTCGCCGGTGCAGGGCTCAGTGTGCCCAGGGCTACACCTGTTTTATGCCGGATCCGACGG
ATCCCAATGGTCGCAACGACATGTGTGTGGCCTCCAACCAGGTCAGCAACACAGATTGTGTTTCGCAGTACAACCAGCTT
GCTGAGCAGTGCCGTGCGCAGGTTACTGACACCACTTATACTTGTGATGAAAAGAATGACTCGGGCATGAGTGGTATTGC
CAATTCAGCCTCCCAGCTTAGTTTGATGTTCGGTCAGCAGACCGCGGGAAGCATTCAGGCAGCGTGTTCAAAAATGGCTT
CCTTCAGTTCGGCGGCGAATGCAGCAGTGGCGGCATACCGTTTGACCTGTCAATCCTCGATCACCAGCTGCCATTCGGCC
TGTGATCAGGTTGTCGAATATGTCAGCAGCAATTCAGCTTGTTTGGATGCGGCAGGTGGCGCCGGGTCTTCGGCTCAGAT
GAGATCCTCTGCAGAAAGTGCGGCCGGGCGCTGCAATGACTTCGATGCGAAGGTGGCGGAAGCCAATCAGGCGATCAATA
ATTTCGCGGGCACCATGCAGAACGCGGCCCAGTGTGCATCTTTGACTTCCGGTGACAGCACGGCTTTGCCAGAGCTGTGC
AAAGCCAATCCTTCTTTGCCAGGCTGTGAAGGCGTGGCGGCGGTGGATTGTACAAATCCCGCGATGTCGGGAAATAAAGT
CTGTGTGTGTGCGAAGAATCCTTCCGATCCTGTTTGTATGAGTGAAAAAAGCTCTGCGGGTTCCACTTTTATCAGCAGCA
CCAATCCGGGTTCTCGCCTTTCAACTAATGGCGCGGACCTTTCCGGTGGCGATCTGCCAAGTCTTCCTTCCATTCTTCCG
GGCAAACCAGGTTCTGGTGGTGCCGGTGAAGCTGTCGACGGAAAACAAGGCGGCGGCGCAGGCATTTCCAGCATGGGTGG
CGGCGGCGGAGGCGGGGCTTCCGGTGGCGCTGCAGGCGAAGAGGGCCTTGAAGACGGTGTTCAGGTGAATGCCGGATTCT
ATGGTGGTGGCGGATCCTTTGGGGGTTCCGGCATGGGCAGTGGTGGTGGTGAGCGCGGAGCTGCCGGCATGGCTGGTGCG
GCGGGCGCAGCCAAAGGCAAGGGGGCGCCGGATCTGCGCCAGTTCCTGCCTGGTGGTAAGTTCGATCCCAAATCCCGCGG
TCTTGCTGGCAACGGCGGACCGGATGGAATTACGGGGCCTCATTCCAATATCTGGCTGAAAATTCAGAACAGATACCAGG
TATTGAGTCCGACTTTGATGCCTTAG

Upstream 100 bases:

>100_bases
ATATCTGGAAGAAAATTCAGAATCGTTATCAGGTTCTGGCTCCGACGTTGATTCCATAATCTCACTCTGAGACTTCGTTA
TACTTTGGTAAAGTTCCCAT

Downstream 100 bases:

>100_bases
TCTTAAATTGAGACGATTCTCTACCTTGGTAAAGTTCTCATGTTGAAATGCCGATCAGGCTTCCATGAGATTCAGTGCAT
TGCTCGCGATAAAATCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MELPNSLFMGMRSFLSISMLFALSISLFSVEAEARRCRAQCAQGYTCFMPDPTDPNGRNDMCVASNQVSNTDCVSQYNQL
AEQCRAQVTDTTYTCDEKNDSGMSGIANSASQLSLMFGQQTAGSIQAACSKMASFSSAANAAVAAYRLTCQSSITSCHSA
CDQVVEYVSSNSACLDAAGGAGSSAQMRSSAESAAGRCNDFDAKVAEANQAINNFAGTMQNAAQCASLTSGDSTALPELC
KANPSLPGCEGVAAVDCTNPAMSGNKVCVCAKNPSDPVCMSEKSSAGSTFISSTNPGSRLSTNGADLSGGDLPSLPSILP
GKPGSGGAGEAVDGKQGGGAGISSMGGGGGGGASGGAAGEEGLEDGVQVNAGFYGGGGSFGGSGMGSGGGERGAAGMAGA
AGAAKGKGAPDLRQFLPGGKFDPKSRGLAGNGGPDGITGPHSNIWLKIQNRYQVLSPTLMP

Sequences:

>Translated_461_residues
MELPNSLFMGMRSFLSISMLFALSISLFSVEAEARRCRAQCAQGYTCFMPDPTDPNGRNDMCVASNQVSNTDCVSQYNQL
AEQCRAQVTDTTYTCDEKNDSGMSGIANSASQLSLMFGQQTAGSIQAACSKMASFSSAANAAVAAYRLTCQSSITSCHSA
CDQVVEYVSSNSACLDAAGGAGSSAQMRSSAESAAGRCNDFDAKVAEANQAINNFAGTMQNAAQCASLTSGDSTALPELC
KANPSLPGCEGVAAVDCTNPAMSGNKVCVCAKNPSDPVCMSEKSSAGSTFISSTNPGSRLSTNGADLSGGDLPSLPSILP
GKPGSGGAGEAVDGKQGGGAGISSMGGGGGGGASGGAAGEEGLEDGVQVNAGFYGGGGSFGGSGMGSGGGERGAAGMAGA
AGAAKGKGAPDLRQFLPGGKFDPKSRGLAGNGGPDGITGPHSNIWLKIQNRYQVLSPTLMP
>Mature_461_residues
MELPNSLFMGMRSFLSISMLFALSISLFSVEAEARRCRAQCAQGYTCFMPDPTDPNGRNDMCVASNQVSNTDCVSQYNQL
AEQCRAQVTDTTYTCDEKNDSGMSGIANSASQLSLMFGQQTAGSIQAACSKMASFSSAANAAVAAYRLTCQSSITSCHSA
CDQVVEYVSSNSACLDAAGGAGSSAQMRSSAESAAGRCNDFDAKVAEANQAINNFAGTMQNAAQCASLTSGDSTALPELC
KANPSLPGCEGVAAVDCTNPAMSGNKVCVCAKNPSDPVCMSEKSSAGSTFISSTNPGSRLSTNGADLSGGDLPSLPSILP
GKPGSGGAGEAVDGKQGGGAGISSMGGGGGGGASGGAAGEEGLEDGVQVNAGFYGGGGSFGGSGMGSGGGERGAAGMAGA
AGAAKGKGAPDLRQFLPGGKFDPKSRGLAGNGGPDGITGPHSNIWLKIQNRYQVLSPTLMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45874; Mature: 45874

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPNSLFMGMRSFLSISMLFALSISLFSVEAEARRCRAQCAQGYTCFMPDPTDPNGRND
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
MCVASNQVSNTDCVSQYNQLAEQCRAQVTDTTYTCDEKNDSGMSGIANSASQLSLMFGQQ
EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHCCHHHHHHHHCCC
TAGSIQAACSKMASFSSAANAAVAAYRLTCQSSITSCHSACDQVVEYVSSNSACLDAAGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
AGSSAQMRSSAESAAGRCNDFDAKVAEANQAINNFAGTMQNAAQCASLTSGDSTALPELC
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KANPSLPGCEGVAAVDCTNPAMSGNKVCVCAKNPSDPVCMSEKSSAGSTFISSTNPGSRL
HCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCC
STNGADLSGGDLPSLPSILPGKPGSGGAGEAVDGKQGGGAGISSMGGGGGGGASGGAAGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EGLEDGVQVNAGFYGGGGSFGGSGMGSGGGERGAAGMAGAAGAAKGKGAPDLRQFLPGGK
HHHHCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
FDPKSRGLAGNGGPDGITGPHSNIWLKIQNRYQVLSPTLMP
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCC
>Mature Secondary Structure
MELPNSLFMGMRSFLSISMLFALSISLFSVEAEARRCRAQCAQGYTCFMPDPTDPNGRND
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
MCVASNQVSNTDCVSQYNQLAEQCRAQVTDTTYTCDEKNDSGMSGIANSASQLSLMFGQQ
EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHCCHHHHHHHHCCC
TAGSIQAACSKMASFSSAANAAVAAYRLTCQSSITSCHSACDQVVEYVSSNSACLDAAGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
AGSSAQMRSSAESAAGRCNDFDAKVAEANQAINNFAGTMQNAAQCASLTSGDSTALPELC
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KANPSLPGCEGVAAVDCTNPAMSGNKVCVCAKNPSDPVCMSEKSSAGSTFISSTNPGSRL
HCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCC
STNGADLSGGDLPSLPSILPGKPGSGGAGEAVDGKQGGGAGISSMGGGGGGGASGGAAGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EGLEDGVQVNAGFYGGGGSFGGSGMGSGGGERGAAGMAGAAGAAKGKGAPDLRQFLPGGK
HHHHCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
FDPKSRGLAGNGGPDGITGPHSNIWLKIQNRYQVLSPTLMP
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA