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The map label for this gene is recA

Identifier: 42522117

GI number: 42522117

Start: 479471

End: 480604

Strand: Direct

Name: recA

Synonym: Bd0512

Alternate gene names: 42522117

Gene position: 479471-480604 (Clockwise)

Preceding gene: 42522116

Following gene: 42522119

Centisome position: 12.67

GC content: 47.44

Gene sequence:

>1134_bases
ATGGCAAACGCTACTGTAGACAACAAAGCGAACTCAGAAAAAATCAAAGCTCTTGAATTGGCTGTTTCGACTATCGAAAA
GCAATTCGGTAAAGGCTCCATCATGCGTTTGGGCGCGAACGAATCTTTGGTTAAAGACGTTGAAGCGATCAGCACGGGTG
CATTGAGCTTGGATATCGCTTTGGGTATCGGCGGTCTTCCTAAAGGTCGTATCTGTGAAATCTATGGACCAGAGTCCTCT
GGTAAAACAACTCTGTGCTTGTCTGTTATCGCTCAAGCTCAGAAAAAGGGCGGCGTTGTCGCTTTCGTTGATGCCGAACA
CGCTTTGGATATCAACTATGCTCGTAAACTGGGTGTGAACACGGAAGATCTTTTGATCTCTCAGCCAGACACTGGTGAAC
AAGCTTTGGAAATCACTGAAACACTTGTTCGTTCCGGCGCGATTGACGTATTGGTTGTCGACTCCGTAGCAGCCTTGGTT
CCTCGTGCAGAGATCGAAGGTGACATGGGTGATTCCCACGTTGGTTTGCAGGCTCGTTTGATGTCCCAGGCTTTGCGTAA
GCTGACTGCGGCGATCAACCGTTCCAACACTCTTGTTATCTTTATTAACCAAATCCGTATGAAAATCGGTGTTATGTTCG
GTAACCCTGAAACAACTACGGGTGGTAACGCTTTGAAATTCTACTCTTCTGTTCGTTTGGATGTACGCCGTGTGGGCGCG
ATCAAAAACGGTGAGGACGTGACTGGTAACCGTACTGCGGTGAAAGTTGTTAAGAATAAAATGGCGCCTCCGTTCACCAA
AGTTGAATTCGACTTGATGTACGGTGAAGGTATCTCTGAAGAGGGTGACCTTCTGGATCTGGCAGTGACTGCGAACATGG
TTGAAAAATCCGGTGCGTGGTTCTCTATCAATGGTGAGCGCATGGGCCAAGGCCGTGATGCTGCGAAGAACTTCCTGAAA
GAGCACCCAGAATACATGGTTGAACTTCGTAAGAAAATCCTTGCAGCAAACGGTATCGGCAAACTTTTGGTTGATACCAA
CGGCAACAACGGTGAAGACCACGAAGGTACAGAGCCAGTTGAAATCGAAGCAGAAGATGCTGCTCCGAAAAAAGGCAAAA
AAGGCAAACACTAG

Upstream 100 bases:

>100_bases
AAAGGCCCCCGGCCTGATTTTTAAACATAATTTGTACTCCGACAGAGTCGGAGTGTAAAAAAGCGTCGTGGCGATAGTCA
CGAGAGAGAGGGAATAACAG

Downstream 100 bases:

>100_bases
TCTGGCGTTCAACTGATTTGAAAAAAGACCGGTCAGAGATTTCTGTCCGGTCTTTTTGAGCGAAGAGAGCTACTTTATTA
GAGGAACTAAAATACTCCAA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MANATVDNKANSEKIKALELAVSTIEKQFGKGSIMRLGANESLVKDVEAISTGALSLDIALGIGGLPKGRICEIYGPESS
GKTTLCLSVIAQAQKKGGVVAFVDAEHALDINYARKLGVNTEDLLISQPDTGEQALEITETLVRSGAIDVLVVDSVAALV
PRAEIEGDMGDSHVGLQARLMSQALRKLTAAINRSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDVRRVGA
IKNGEDVTGNRTAVKVVKNKMAPPFTKVEFDLMYGEGISEEGDLLDLAVTANMVEKSGAWFSINGERMGQGRDAAKNFLK
EHPEYMVELRKKILAANGIGKLLVDTNGNNGEDHEGTEPVEIEAEDAAPKKGKKGKH

Sequences:

>Translated_377_residues
MANATVDNKANSEKIKALELAVSTIEKQFGKGSIMRLGANESLVKDVEAISTGALSLDIALGIGGLPKGRICEIYGPESS
GKTTLCLSVIAQAQKKGGVVAFVDAEHALDINYARKLGVNTEDLLISQPDTGEQALEITETLVRSGAIDVLVVDSVAALV
PRAEIEGDMGDSHVGLQARLMSQALRKLTAAINRSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDVRRVGA
IKNGEDVTGNRTAVKVVKNKMAPPFTKVEFDLMYGEGISEEGDLLDLAVTANMVEKSGAWFSINGERMGQGRDAAKNFLK
EHPEYMVELRKKILAANGIGKLLVDTNGNNGEDHEGTEPVEIEAEDAAPKKGKKGKH
>Mature_376_residues
ANATVDNKANSEKIKALELAVSTIEKQFGKGSIMRLGANESLVKDVEAISTGALSLDIALGIGGLPKGRICEIYGPESSG
KTTLCLSVIAQAQKKGGVVAFVDAEHALDINYARKLGVNTEDLLISQPDTGEQALEITETLVRSGAIDVLVVDSVAALVP
RAEIEGDMGDSHVGLQARLMSQALRKLTAAINRSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDVRRVGAI
KNGEDVTGNRTAVKVVKNKMAPPFTKVEFDLMYGEGISEEGDLLDLAVTANMVEKSGAWFSINGERMGQGRDAAKNFLKE
HPEYMVELRKKILAANGIGKLLVDTNGNNGEDHEGTEPVEIEAEDAAPKKGKKGKH

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=320, Percent_Identity=67.8125, Blast_Score=446, Evalue=1e-126,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_BDEBA (P62212)

Other databases:

- EMBL:   BX842647
- RefSeq:   NP_967497.1
- ProteinModelPortal:   P62212
- SMR:   P62212
- GeneID:   2734359
- GenomeReviews:   BX842601_GR
- KEGG:   bba:Bd0512
- NMPDR:   fig|264462.1.peg.467
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- PhylomeDB:   P62212
- ProtClustDB:   PRK09354
- BioCyc:   BBAC264462:BD0512-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 40289; Mature: 40157

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANATVDNKANSEKIKALELAVSTIEKQFGKGSIMRLGANESLVKDVEAISTGALSLDIA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCEEEEEE
LGIGGLPKGRICEIYGPESSGKTTLCLSVIAQAQKKGGVVAFVDAEHALDINYARKLGVN
ECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEECCHHHHHCCCC
TEDLLISQPDTGEQALEITETLVRSGAIDVLVVDSVAALVPRAEIEGDMGDSHVGLQARL
HHHEEEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHCCCCCCCCCCCHHHHH
MSQALRKLTAAINRSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDVRRVGA
HHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCC
IKNGEDVTGNRTAVKVVKNKMAPPFTKVEFDLMYGEGISEEGDLLDLAVTANMVEKSGAW
CCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEHHHHHHCCCCE
FSINGERMGQGRDAAKNFLKEHPEYMVELRKKILAANGIGKLLVDTNGNNGEDHEGTEPV
EEECCHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCE
EIEAEDAAPKKGKKGKH
EEEECCCCCCCCCCCCC
>Mature Secondary Structure 
ANATVDNKANSEKIKALELAVSTIEKQFGKGSIMRLGANESLVKDVEAISTGALSLDIA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCEEEEEE
LGIGGLPKGRICEIYGPESSGKTTLCLSVIAQAQKKGGVVAFVDAEHALDINYARKLGVN
ECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEECCHHHHHCCCC
TEDLLISQPDTGEQALEITETLVRSGAIDVLVVDSVAALVPRAEIEGDMGDSHVGLQARL
HHHEEEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHCCCCCCCCCCCHHHHH
MSQALRKLTAAINRSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDVRRVGA
HHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCC
IKNGEDVTGNRTAVKVVKNKMAPPFTKVEFDLMYGEGISEEGDLLDLAVTANMVEKSGAW
CCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEHHHHHHCCCCE
FSINGERMGQGRDAAKNFLKEHPEYMVELRKKILAANGIGKLLVDTNGNNGEDHEGTEPV
EEECCHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCE
EIEAEDAAPKKGKKGKH
EEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA