| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is artJ [C]
Identifier: 42522111
GI number: 42522111
Start: 474641
End: 475462
Strand: Direct
Name: artJ [C]
Synonym: Bd0505
Alternate gene names: 42522111
Gene position: 474641-475462 (Clockwise)
Preceding gene: 42522110
Following gene: 42522112
Centisome position: 12.55
GC content: 46.84
Gene sequence:
>822_bases TTGTTCATTCGCTGTTATGATTACAGTGTGAAAACACGGTTATTAATTCTTTCATTGATCCTTCTATGTTTTTCTACAGT GGCGTCTGCGAAAGACTGTGGTCGCCGCTATCGCATTATTGTGAACAACTATGCCCCTTTGTTTGACGTGAACAATGAAG GTCATGTTCACGGTCTGACGTTTGATATTATGAACGAACTTTCGCAGCGGTTGGGTTGTGTGGTTTCACAGGCCCCCATG GATGCCCCGCGAATGCAGGATGATTTTAATAACTGGCGTGCGGATATTGTGGGTCTGGTCATCCCTTCAGAAAAGTACCT TGCCACTGGAGAGTATGTTCCGGTGTACAAGACGGTCCGGAAGCTGTTGGTGAACAAGGCGCACTATGATCGCTCACGCA CGATAGCAGACTATATTAAAGACAGCCGTATCAAGTTCGGCGATCAAATCGGCACTCGTTTCTTTTTGACGACCGACGAG AAAAAATTGTTATTCGAAGCCGGGCGCATCGTTCAATATCCAAGTCCGGCGACGGGCTTTCGTCAGCTGACTTCGGGGCG GGTGCAGGCGATGTTCACATCACAATCAATTTACAACTATTACCAAAAGACGATTCCCGATTTGAATCAGAGTGTGGTGG CCATTCCCGATCCCAACTATGAGATGGAAGGCGGGATCTATCTTTCTGTGCGCAGAATTTCGAAGACCGAAGCAATGCAG ATTAAAAAAGCCATCAGCGACATGAGAAAAGACGGAACGCTTCGCCGGATCGTTGCAAAATATGCCTCTGCGGAGGATTT GACTTTCTATAAAGACCTTTAG
Upstream 100 bases:
>100_bases GAAGACGCCAAGATCGTCATCCCTGACACATGGGCGCAAGAACTGCCTTGAGTTTAGTCTTGTTACAAGACTGAAAGAGT GGGGTCTTCTTGTTCGTTCT
Downstream 100 bases:
>100_bases GTTGCCCGCCAGGTGGTTCTCGTATTAACTGATGTTAACTGGAGAACCATGATGAACTCTTCCGTATATTCCTCTTTGGA CTTAAATGGCAAAACCGCCG
Product: hypothetical protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLTFDIMNELSQRLGCVVSQAPM DAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVRKLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDE KKLLFEAGRIVQYPSPATGFRQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL
Sequences:
>Translated_273_residues MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLTFDIMNELSQRLGCVVSQAPM DAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVRKLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDE KKLLFEAGRIVQYPSPATGFRQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL >Mature_273_residues MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLTFDIMNELSQRLGCVVSQAPM DAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVRKLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDE KKLLFEAGRIVQYPSPATGFRQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL
Specific function: Binds Arginine; Part Of The Arginine Periplasmic Transport System. [C]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31317; Mature: 31317
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLT CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCEEEEH FDIMNELSQRLGCVVSQAPMDAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVR HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEEECCCCEEECCCCCHHHHHHH KLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDEKKLLFEAGRIVQYPSPATGF HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCEEECCCCCHHH RQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ HHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCEEEEEEEHHHHHHHH IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLT CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCEEEEH FDIMNELSQRLGCVVSQAPMDAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVR HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEEECCCCEEECCCCCHHHHHHH KLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDEKKLLFEAGRIVQYPSPATGF HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCEEECCCCCHHH RQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ HHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCEEEEEEEHHHHHHHH IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA