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The map label for this gene is yejB [H]

Identifier: 42521976

GI number: 42521976

Start: 335842

End: 336873

Strand: Direct

Name: yejB [H]

Synonym: Bd0358

Alternate gene names: 42521976

Gene position: 335842-336873 (Clockwise)

Preceding gene: 42521975

Following gene: 42521977

Centisome position: 8.88

GC content: 49.42

Gene sequence:

>1032_bases
TTGATCGTCTACCTGATTCGCCGATTACTACTGATGATCCCGACATTCTTCGGGATCACCATCATGACTTTCGTTCTTAT
CAATCTGGCTCCGGGCAGCCCCATTGAGCAGAAACTGCAGGCAATTCGCTTCGGTTCTGCTGGTGGCGGTGGCGGCGGAG
CTGCCGGCGTTAACAGTCGCGGGGACTCCGCGGTTAACGAAGAAGTGATTGAGGCTTTGAAGAAACAATACGGTTTCGAC
AAGCCTTTGCACGAACGTTACATCATCTGGCTAAAAAATCTGTCCCGTTTGGATTTCGGTGAAAGCTTCACCTACCAGGA
GCCGGTCATTGACGTGATCAAAAGTAAGTTCCCGGTTTCCTTGCAGTTCGGTATCGCCTCTTTGATCCTGACTTATCTGG
TGTGTATCCCTCTGGGTGTTCGCAAAGCCATCAAGGCCGGCGGCGCTTTTGACCGTATCACCACTATTATTCTGAATCTG
ACGTACTCCATCCCACCATTGGTTTTGGGTATCTTCCTGATCGTTGTGTTCGCCGGGAAACTGAACATGTTCCCATTGGG
TGGATTGCACTCGGACGATTATGAAGTGCTGACCACCTGGGGTAAGATCGTGGATCGCGCTCACCACTTTGTGCTGCCGC
TGATCTGTTACATGATCGGTGGTTTCACGGAGCTTTCCACTCTGATGCGAAACTCCATGCTGGATGTTGTGAAGTCCGAC
TTTGTTCGTACGGCACGCGCCAAGGGTCTTTCTGACAACGTGGTTATCTTCAAACATGCTCTTCGCAACGCTTTGATCCC
GATCGCAACCGGTTTGGGTGGCTTCTTCGGAGCCTTCCTGGCGGGTTCTTTGATCATCGAACAGATGTTCAATTTGGACG
GTATCGGTTTGCTGGGTTATCAGTCCATCATGGCGCGTGACTATAACGTGATCATGGGTCTGACATTTATTTCGTCTTTG
CTTTTGATGTTCGGACGTATTTTCTCTGACATCATTTATGTTCTTATTGATCCAAGGATTGACTTCAAATGA

Upstream 100 bases:

>100_bases
TTAAGTACGAAATTGGTACAGACTACTGGTGGATGAAGCCTCAATAGGCTTCTTCCTCTGGAATTGTTCATCTGTCTCTT
ATTAGTTTGGGAGTAGGGCT

Downstream 100 bases:

>100_bases
TCGAAAAATATCTTATTCGCAATGAATTGACGCTGAAGAGATATAAGCGATTTAAGCGCGATCGTGTCGCTGTTGTCTCT
GTTTGGATTCTTTTGGCTAT

Product: peptide ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MIVYLIRRLLLMIPTFFGITIMTFVLINLAPGSPIEQKLQAIRFGSAGGGGGGAAGVNSRGDSAVNEEVIEALKKQYGFD
KPLHERYIIWLKNLSRLDFGESFTYQEPVIDVIKSKFPVSLQFGIASLILTYLVCIPLGVRKAIKAGGAFDRITTIILNL
TYSIPPLVLGIFLIVVFAGKLNMFPLGGLHSDDYEVLTTWGKIVDRAHHFVLPLICYMIGGFTELSTLMRNSMLDVVKSD
FVRTARAKGLSDNVVIFKHALRNALIPIATGLGGFFGAFLAGSLIIEQMFNLDGIGLLGYQSIMARDYNVIMGLTFISSL
LLMFGRIFSDIIYVLIDPRIDFK

Sequences:

>Translated_343_residues
MIVYLIRRLLLMIPTFFGITIMTFVLINLAPGSPIEQKLQAIRFGSAGGGGGGAAGVNSRGDSAVNEEVIEALKKQYGFD
KPLHERYIIWLKNLSRLDFGESFTYQEPVIDVIKSKFPVSLQFGIASLILTYLVCIPLGVRKAIKAGGAFDRITTIILNL
TYSIPPLVLGIFLIVVFAGKLNMFPLGGLHSDDYEVLTTWGKIVDRAHHFVLPLICYMIGGFTELSTLMRNSMLDVVKSD
FVRTARAKGLSDNVVIFKHALRNALIPIATGLGGFFGAFLAGSLIIEQMFNLDGIGLLGYQSIMARDYNVIMGLTFISSL
LLMFGRIFSDIIYVLIDPRIDFK
>Mature_343_residues
MIVYLIRRLLLMIPTFFGITIMTFVLINLAPGSPIEQKLQAIRFGSAGGGGGGAAGVNSRGDSAVNEEVIEALKKQYGFD
KPLHERYIIWLKNLSRLDFGESFTYQEPVIDVIKSKFPVSLQFGIASLILTYLVCIPLGVRKAIKAGGAFDRITTIILNL
TYSIPPLVLGIFLIVVFAGKLNMFPLGGLHSDDYEVLTTWGKIVDRAHHFVLPLICYMIGGFTELSTLMRNSMLDVVKSD
FVRTARAKGLSDNVVIFKHALRNALIPIATGLGGFFGAFLAGSLIIEQMFNLDGIGLLGYQSIMARDYNVIMGLTFISSL
LLMFGRIFSDIIYVLIDPRIDFK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=43.0939226519337, Blast_Score=286, Evalue=1e-78,
Organism=Escherichia coli, GI1789965, Length=360, Percent_Identity=31.3888888888889, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787053, Length=343, Percent_Identity=31.7784256559767, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1787497, Length=343, Percent_Identity=29.4460641399417, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI1789888, Length=340, Percent_Identity=28.5294117647059, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1787761, Length=338, Percent_Identity=29.2899408284024, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1787550, Length=272, Percent_Identity=26.8382352941176, Blast_Score=104, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37816; Mature: 37816

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVYLIRRLLLMIPTFFGITIMTFVLINLAPGSPIEQKLQAIRFGSAGGGGGGAAGVNSR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GDSAVNEEVIEALKKQYGFDKPLHERYIIWLKNLSRLDFGESFTYQEPVIDVIKSKFPVS
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC
LQFGIASLILTYLVCIPLGVRKAIKAGGAFDRITTIILNLTYSIPPLVLGIFLIVVFAGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LNMFPLGGLHSDDYEVLTTWGKIVDRAHHFVLPLICYMIGGFTELSTLMRNSMLDVVKSD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FVRTARAKGLSDNVVIFKHALRNALIPIATGLGGFFGAFLAGSLIIEQMFNLDGIGLLGY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QSIMARDYNVIMGLTFISSLLLMFGRIFSDIIYVLIDPRIDFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIVYLIRRLLLMIPTFFGITIMTFVLINLAPGSPIEQKLQAIRFGSAGGGGGGAAGVNSR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GDSAVNEEVIEALKKQYGFDKPLHERYIIWLKNLSRLDFGESFTYQEPVIDVIKSKFPVS
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC
LQFGIASLILTYLVCIPLGVRKAIKAGGAFDRITTIILNLTYSIPPLVLGIFLIVVFAGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LNMFPLGGLHSDDYEVLTTWGKIVDRAHHFVLPLICYMIGGFTELSTLMRNSMLDVVKSD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FVRTARAKGLSDNVVIFKHALRNALIPIATGLGGFFGAFLAGSLIIEQMFNLDGIGLLGY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QSIMARDYNVIMGLTFISSLLLMFGRIFSDIIYVLIDPRIDFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]