| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521917
Identifier: 42521917
GI number: 42521917
Start: 278168
End: 279148
Strand: Direct
Name: 42521917
Synonym: Bd0294
Alternate gene names: NA
Gene position: 278168-279148 (Clockwise)
Preceding gene: 42521916
Following gene: 42521919
Centisome position: 7.35
GC content: 51.99
Gene sequence:
>981_bases GTGAAATTAGGTTCTCTTAAATCGTCTCAAAGCATGGATGGTGAATTGTGTGTGATCAGCCGCGATCTGAAGACCGCGGT GAAGGCCACGGCGATTGCCCCTTCCTTGCGTGAGGCGATGGAAAAATGGTCCGAGAAAGAAGCTTCCCTGAAGAAACTTT CTGACGACTTGAATGCGGGCAAAGCGACCGGTGCATTTGCCGTTAAAGAAGGTGACTTCCATTCTGCGCTTCCGCGCACG TGGTTGTTTGCTGATGGTTCTGCTTTTATCTATCACATCAAGCTGGTGCGCATGGCGCGCAAAGCTCCACTGCCAGAGAC ATTGAGCACCGTTCCTTTGATGTATCAGGGCGAATGTGGCCAATTCCTGGCGCCGACCGAAGACATCCCTCAGCGTGATT TCGCGCACGGGACAGACTTTGAAGGTGAAGTGGGTGTGGTGACTGATTTCGTGCCAATGGGTGTGACACCGGACGAAGCA CTGAAATACATCCGTCTGTATGTTCTGATCAATGACGTGTCTTTGCGTGGTTTGATCCCTGAAGAGCTGGCGGCGGGCTT TGGCTTCTTCCAAAGCAAGCCGGCATCAGCCCTGGCTCCGTTTGCTGTGACGGCAGACGAGCTGGGTGAAGCCTTGAAAG ACGGGCGCATTCATCTGCCTCTGAACGTGAAGTACAATGGGGAATTCTTTGGTAAAGCCAATGCAGGCGCCATGCACTTC CACTTTGGTCAGTTGATTGCTCACGCAGCAAAAACCCGCAATCTGGCGGCTGGATCCGTGATCGGCAGTGGAACTGTTTC CAATGAAGATCACGCCAATGGTTCAAGCTGTCTGGCGGAAAAACGCATGATTGAGCAAATCGAGACAGGCGCGATCAAAA CGCCATTTATGAAGTCCGGCGACACCGTTGAAATGGAAATGTTCAACGCTCAAGGTGAAAGCATCTTCGGACGCATCTTC CAGAAGGTGAAGGCTGTTTAA
Upstream 100 bases:
>100_bases CTGCCAGCGGTGACGCCGCAGACGGTCTGAAAAACTACCGCGCGGTGGGCGCGAACTTGCAGATCACTTTTGACTAAGAA TTTTTTGAATAGGATACGAC
Downstream 100 bases:
>100_bases GCCTTCACCCGTTCTTTCGGGCCCTTGCTTAAAGGGCCTGAATCACTCCACACGCAATACGCGCACCAGAGTTTCCTGCC GGTTGGGATTTCAAATCATC
Product: fumarylacetoacetate hydrolase family protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Hydroxylase; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; Fumarylacetoacetate; Hydrolase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetase Protein; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKLGSLKSSQSMDGELCVISRDLKTAVKATAIAPSLREAMEKWSEKEASLKKLSDDLNAGKATGAFAVKEGDFHSALPRT WLFADGSAFIYHIKLVRMARKAPLPETLSTVPLMYQGECGQFLAPTEDIPQRDFAHGTDFEGEVGVVTDFVPMGVTPDEA LKYIRLYVLINDVSLRGLIPEELAAGFGFFQSKPASALAPFAVTADELGEALKDGRIHLPLNVKYNGEFFGKANAGAMHF HFGQLIAHAAKTRNLAAGSVIGSGTVSNEDHANGSSCLAEKRMIEQIETGAIKTPFMKSGDTVEMEMFNAQGESIFGRIF QKVKAV
Sequences:
>Translated_326_residues MKLGSLKSSQSMDGELCVISRDLKTAVKATAIAPSLREAMEKWSEKEASLKKLSDDLNAGKATGAFAVKEGDFHSALPRT WLFADGSAFIYHIKLVRMARKAPLPETLSTVPLMYQGECGQFLAPTEDIPQRDFAHGTDFEGEVGVVTDFVPMGVTPDEA LKYIRLYVLINDVSLRGLIPEELAAGFGFFQSKPASALAPFAVTADELGEALKDGRIHLPLNVKYNGEFFGKANAGAMHF HFGQLIAHAAKTRNLAAGSVIGSGTVSNEDHANGSSCLAEKRMIEQIETGAIKTPFMKSGDTVEMEMFNAQGESIFGRIF QKVKAV >Mature_326_residues MKLGSLKSSQSMDGELCVISRDLKTAVKATAIAPSLREAMEKWSEKEASLKKLSDDLNAGKATGAFAVKEGDFHSALPRT WLFADGSAFIYHIKLVRMARKAPLPETLSTVPLMYQGECGQFLAPTEDIPQRDFAHGTDFEGEVGVVTDFVPMGVTPDEA LKYIRLYVLINDVSLRGLIPEELAAGFGFFQSKPASALAPFAVTADELGEALKDGRIHLPLNVKYNGEFFGKANAGAMHF HFGQLIAHAAKTRNLAAGSVIGSGTVSNEDHANGSSCLAEKRMIEQIETGAIKTPFMKSGDTVEMEMFNAQGESIFGRIF QKVKAV
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35238; Mature: 35238
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGSLKSSQSMDGELCVISRDLKTAVKATAIAPSLREAMEKWSEKEASLKKLSDDLNAG CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KATGAFAVKEGDFHSALPRTWLFADGSAFIYHIKLVRMARKAPLPETLSTVPLMYQGECG CCCCEEEEECCCCHHHCCCEEEEECCCEEEHHHHHHHHHHHCCCCHHHHHCCEEECCCCC QFLAPTEDIPQRDFAHGTDFEGEVGVVTDFVPMGVTPDEALKYIRLYVLINDVSLRGLIP CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHEEEEEEEECCCCCCCCH EELAAGFGFFQSKPASALAPFAVTADELGEALKDGRIHLPLNVKYNGEFFGKANAGAMHF HHHHHHCCHHHCCCCHHHCCCEECHHHHHHHHHCCEEEEEEEEEECCEEEECCCCCEEEH HFGQLIAHAAKTRNLAAGSVIGSGTVSNEDHANGSSCLAEKRMIEQIETGAIKTPFMKSG HHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC DTVEMEMFNAQGESIFGRIFQKVKAV CEEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKLGSLKSSQSMDGELCVISRDLKTAVKATAIAPSLREAMEKWSEKEASLKKLSDDLNAG CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KATGAFAVKEGDFHSALPRTWLFADGSAFIYHIKLVRMARKAPLPETLSTVPLMYQGECG CCCCEEEEECCCCHHHCCCEEEEECCCEEEHHHHHHHHHHHCCCCHHHHHCCEEECCCCC QFLAPTEDIPQRDFAHGTDFEGEVGVVTDFVPMGVTPDEALKYIRLYVLINDVSLRGLIP CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHEEEEEEEECCCCCCCCH EELAAGFGFFQSKPASALAPFAVTADELGEALKDGRIHLPLNVKYNGEFFGKANAGAMHF HHHHHHCCHHHCCCCHHHCCCEECHHHHHHHHHCCEEEEEEEEEECCEEEECCCCCEEEH HFGQLIAHAAKTRNLAAGSVIGSGTVSNEDHANGSSCLAEKRMIEQIETGAIKTPFMKSG HHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC DTVEMEMFNAQGESIFGRIFQKVKAV CEEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA