Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521868

Identifier: 42521868

GI number: 42521868

Start: 230352

End: 230708

Strand: Direct

Name: 42521868

Synonym: Bd0243

Alternate gene names: NA

Gene position: 230352-230708 (Clockwise)

Preceding gene: 42521867

Following gene: 42521872

Centisome position: 6.09

GC content: 49.3

Gene sequence:

>357_bases
ATGAAATTCCTAACTATGTTTTCTGTATTGATTCTTGGCGGCGCAGCGCAGGCGATGACGGCAAAGGTTGTGAATTCAAC
GGATGTGCGTTTTATGGCGGACTTGATTTTGACTCGTGCAAGTGGCGGAGCCCCACTGAGTGTTGTGGATGACAAGATCC
TTGCGCCGGGAGAAGCCTTCGAGAAAAACTACGGAGTGTTGGACGCCAATGAGCTTGTCCTAAGATACGAAATCATCTCC
ACCGACAATAAACCCATCTGTTTGGGCAAGGTGGATGTGACTTCTAAAAGCAACTTCAAGCTTGTCGTCGACGGCCACCC
TGGGATGGCTCCTGTGGATTGCAAAGTCACCCAATAA

Upstream 100 bases:

>100_bases
CCTCGCCCCCTGCCATTTTTGTGAAGCAAAAATCCTTTAATCTCCAATTTCCAATATCTCTGCCGGGTCGCCAGTGTTAA
AAATGTAAATGGGGGTACTG

Downstream 100 bases:

>100_bases
GGGTGTCGCAACAACAGAAGACCCGCAGAACTTTTATTGTGCTACGAACTCAATGGGCTGCGGGTTCCAAATAACTTTTC
CTTCGGAATCCAGGTCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAFEKNYGVLDANELVLRYEIIS
TDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ

Sequences:

>Translated_118_residues
MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAFEKNYGVLDANELVLRYEIIS
TDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ
>Mature_118_residues
MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAFEKNYGVLDANELVLRYEIIS
TDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12604; Mature: 12604

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAF
CHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCEECCCCHH
EKNYGVLDANELVLRYEIISTDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ
HCCCCEECCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCEEEECC
>Mature Secondary Structure
MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAF
CHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCEECCCCHH
EKNYGVLDANELVLRYEIISTDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ
HCCCCEECCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA