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The map label for this gene is ctpA [H]

Identifier: 42521804

GI number: 42521804

Start: 157315

End: 158691

Strand: Direct

Name: ctpA [H]

Synonym: Bd0169

Alternate gene names: 42521804

Gene position: 157315-158691 (Clockwise)

Preceding gene: 42521803

Following gene: 42521805

Centisome position: 4.16

GC content: 46.99

Gene sequence:

>1377_bases
ATGCAATCACTCAAACGCTACTGGAAAACCTATATTTTGGGCGGCGCCCTTCTGCTGGTTTTGTTCATCATGGCAGAAAC
AGGTTTCCAGGTTAGATCCTTTGCTCAGGAAAGGTATGCGGATCTGCAGAACTTCAGTAAAGTTCTTAATCTGATTCAGC
AGTACTATGTTGAAGAAGTGAATACCAAGAAGCTGGTTTACGGGGCGATCAAAGGGATGCTGCGCGAACTGGATCCACAC
ACGAACTTCATGCCACCGGAGATGTTCAAGGATTTTGAGACAGAAACCAGTGGTGAGTTCGGTGGGTTGGGTATTGAGAT
TTCCATTCAAAACGGCATTCTGACGATCATTTCCCCGATCGAGGATGCACCAGCCTGGGAAGCGGGCATCAAGGCTGGGG
ATAAAGTTGTATCTATCGACGGGACCACCACAAAAGGCATGAGTCTGGCCGAAGCTTCCGTGATGATGCGTGGAAAAAAA
GGCAGCAAGATTGTTTTGCGAGTCGTGCGCGATAACGAGGAAAAACCTCGCGACATCACCGTTGTTCGTGGCAGTGTGAA
AATCAAGTCAGTGAAGTACACGGATCTGGGGGATGGTTTTGCTTATGTGCGGATCACAAGCTTCATTGAAAACACATCCA
AGGATCTGCAAAAGACTGTTGAAAATCATATCAAGAACAACAAAAATATGGCGGGCTTGTTGATTGATATGCGCAGAAAT
CCGGGTGGTTTGCTGGATCAGGCCATCAAGGTCAGTGATATGTTCCTGAAGGACGGGACGATTGTTTCCACTATCGGACG
TAATAAAAACGAAAAAGAAGTGGCGACAGCCTCTAAAAAAGGTCAGTACACAAACTTCCCGATTGTGATTCTGGTGAATG
AATACACCGCAAGTGCCAGTGAAATTGTGTCCGGTGCTTTGCAGGACAACAAACGTGCTTTGATCGTCGGTCAAAGAACA
TTTGGTAAAGGCTCCGTCCAGTCTGTGATCAAGCTGGGTGATGGCAGTGGTTTGAAATTGACCGTGGCTCGTTACTACAC
ACCGAATGGTGTTTCGATCCAGGCAGAAGGTATTCATCCTGACATCGAAATTGAAGATGTGGATCCGGATGCTTTCTCTA
AGGCGATTGTGAAGTCTGTCACAACTCGTGAAGGTGATATCGCAGGTCACTTGAAAGGTGATCGTGAGAAAGCGGCAGAG
AAGCTGGATGTTAAAGAGGGCGCAGAAGAAGGCGCACTGGCTTGGTGGAAAGACGTGGGATCGAAAAAAGATGAAAAGCT
GTCGCCGCGCGATAAGCTGTTCAAGTCTGATTATCAAGCATATCAAGCATTTAGCTATCTCAAAGCATGGGATACTTTGA
AGGCTTTGACGCGCTAG

Upstream 100 bases:

>100_bases
GGTGAAGCCCCGCAAGACGGCAGTTCCGGACTGTATTTTGAAATTAGACATTTTTCCGAACCCTACGACCCGCAACAGTG
GATGAAAGGACTCTAACACT

Downstream 100 bases:

>100_bases
TTATTGATTAAGAATTTTAGAGGCCCTACTCTAGCCGCACATCCAAGGCAGAGGGGGCCTTTCATGTTAAAACTTGTTAT
CTTCATCACGGCGTTGTGTT

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MQSLKRYWKTYILGGALLLVLFIMAETGFQVRSFAQERYADLQNFSKVLNLIQQYYVEEVNTKKLVYGAIKGMLRELDPH
TNFMPPEMFKDFETETSGEFGGLGIEISIQNGILTIISPIEDAPAWEAGIKAGDKVVSIDGTTTKGMSLAEASVMMRGKK
GSKIVLRVVRDNEEKPRDITVVRGSVKIKSVKYTDLGDGFAYVRITSFIENTSKDLQKTVENHIKNNKNMAGLLIDMRRN
PGGLLDQAIKVSDMFLKDGTIVSTIGRNKNEKEVATASKKGQYTNFPIVILVNEYTASASEIVSGALQDNKRALIVGQRT
FGKGSVQSVIKLGDGSGLKLTVARYYTPNGVSIQAEGIHPDIEIEDVDPDAFSKAIVKSVTTREGDIAGHLKGDREKAAE
KLDVKEGAEEGALAWWKDVGSKKDEKLSPRDKLFKSDYQAYQAFSYLKAWDTLKALTR

Sequences:

>Translated_458_residues
MQSLKRYWKTYILGGALLLVLFIMAETGFQVRSFAQERYADLQNFSKVLNLIQQYYVEEVNTKKLVYGAIKGMLRELDPH
TNFMPPEMFKDFETETSGEFGGLGIEISIQNGILTIISPIEDAPAWEAGIKAGDKVVSIDGTTTKGMSLAEASVMMRGKK
GSKIVLRVVRDNEEKPRDITVVRGSVKIKSVKYTDLGDGFAYVRITSFIENTSKDLQKTVENHIKNNKNMAGLLIDMRRN
PGGLLDQAIKVSDMFLKDGTIVSTIGRNKNEKEVATASKKGQYTNFPIVILVNEYTASASEIVSGALQDNKRALIVGQRT
FGKGSVQSVIKLGDGSGLKLTVARYYTPNGVSIQAEGIHPDIEIEDVDPDAFSKAIVKSVTTREGDIAGHLKGDREKAAE
KLDVKEGAEEGALAWWKDVGSKKDEKLSPRDKLFKSDYQAYQAFSYLKAWDTLKALTR
>Mature_458_residues
MQSLKRYWKTYILGGALLLVLFIMAETGFQVRSFAQERYADLQNFSKVLNLIQQYYVEEVNTKKLVYGAIKGMLRELDPH
TNFMPPEMFKDFETETSGEFGGLGIEISIQNGILTIISPIEDAPAWEAGIKAGDKVVSIDGTTTKGMSLAEASVMMRGKK
GSKIVLRVVRDNEEKPRDITVVRGSVKIKSVKYTDLGDGFAYVRITSFIENTSKDLQKTVENHIKNNKNMAGLLIDMRRN
PGGLLDQAIKVSDMFLKDGTIVSTIGRNKNEKEVATASKKGQYTNFPIVILVNEYTASASEIVSGALQDNKRALIVGQRT
FGKGSVQSVIKLGDGSGLKLTVARYYTPNGVSIQAEGIHPDIEIEDVDPDAFSKAIVKSVTTREGDIAGHLKGDREKAAE
KLDVKEGAEEGALAWWKDVGSKKDEKLSPRDKLFKSDYQAYQAFSYLKAWDTLKALTR

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=338, Percent_Identity=31.3609467455621, Blast_Score=142, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 50691; Mature: 50691

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLKRYWKTYILGGALLLVLFIMAETGFQVRSFAQERYADLQNFSKVLNLIQQYYVEEV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTKKLVYGAIKGMLRELDPHTNFMPPEMFKDFETETSGEFGGLGIEISIQNGILTIISPI
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECC
EDAPAWEAGIKAGDKVVSIDGTTTKGMSLAEASVMMRGKKGSKIVLRVVRDNEEKPRDIT
CCCCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEE
VVRGSVKIKSVKYTDLGDGFAYVRITSFIENTSKDLQKTVENHIKNNKNMAGLLIDMRRN
EEECCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC
PGGLLDQAIKVSDMFLKDGTIVSTIGRNKNEKEVATASKKGQYTNFPIVILVNEYTASAS
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHH
EIVSGALQDNKRALIVGQRTFGKGSVQSVIKLGDGSGLKLTVARYYTPNGVSIQAEGIHP
HHHHHHHCCCCEEEEEECCCCCCCHHHHHHEECCCCCCEEEEEEEECCCCCEEEECCCCC
DIEIEDVDPDAFSKAIVKSVTTREGDIAGHLKGDREKAAEKLDVKEGAEEGALAWWKDVG
CCEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCC
SKKDEKLSPRDKLFKSDYQAYQAFSYLKAWDTLKALTR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSLKRYWKTYILGGALLLVLFIMAETGFQVRSFAQERYADLQNFSKVLNLIQQYYVEEV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTKKLVYGAIKGMLRELDPHTNFMPPEMFKDFETETSGEFGGLGIEISIQNGILTIISPI
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECC
EDAPAWEAGIKAGDKVVSIDGTTTKGMSLAEASVMMRGKKGSKIVLRVVRDNEEKPRDIT
CCCCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEE
VVRGSVKIKSVKYTDLGDGFAYVRITSFIENTSKDLQKTVENHIKNNKNMAGLLIDMRRN
EEECCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC
PGGLLDQAIKVSDMFLKDGTIVSTIGRNKNEKEVATASKKGQYTNFPIVILVNEYTASAS
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHH
EIVSGALQDNKRALIVGQRTFGKGSVQSVIKLGDGSGLKLTVARYYTPNGVSIQAEGIHP
HHHHHHHCCCCEEEEEECCCCCCCHHHHHHEECCCCCCEEEEEEEECCCCCEEEECCCCC
DIEIEDVDPDAFSKAIVKSVTTREGDIAGHLKGDREKAAEKLDVKEGAEEGALAWWKDVG
CCEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCC
SKKDEKLSPRDKLFKSDYQAYQAFSYLKAWDTLKALTR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]