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The map label for this gene is nlpD [C]

Identifier: 42521803

GI number: 42521803

Start: 156195

End: 157310

Strand: Direct

Name: nlpD [C]

Synonym: Bd0168

Alternate gene names: 42521803

Gene position: 156195-157310 (Clockwise)

Preceding gene: 42521802

Following gene: 42521804

Centisome position: 4.13

GC content: 49.64

Gene sequence:

>1116_bases
TTGAAGATTGCACAGATTCTTTTGGTATTGGGACTGTCACTGACGTTGGGGGCGAAGGCCGCAAATCCCACTGAAGTGGA
CAGTCTTGCCAAGGACTTTGAAGCGACCAAAAAAAAGCTGGAGGATGCCGAGCTGAAACAGCGGCAGGTCCTGTCTGCCC
TTTATCAGTTGAATAAAAAAATCAAAAAGATTGTGACTGAAAAAGGGGAGATGTCCCAGCAGCGGGCGTTCCTGGAAGTG
AACATCCGCAACCTCACCCAAAAAGTGGAGGACCTGGACCAGAAATCGCGCCAGCAGAGAACTCTTTTGGCGGAACGTCT
GCGGGCCATGTACAAACTGGGCGGGCCTTCGATTGCGCGCTTCCTGTTTTCTTCCAGCAGTTCGGCTTCTTTGGAAAGAA
ATCTGAAAATTCTGGGCGTGGTTGCCGCCCGTGACCTTGAGCTGATCAAAAACTATTCCCGGGACCTGAAGGACCTGGAG
GCCAAACGCAAGACTTTGGCGCAACGTCTGGACAGTATGAAGTCCGTAGAACAAAAAATCGCCTTGCAGGAAAAGGCCCT
GCGTAAAGAGCAGGACCTTAAAGGCAAACTTCTGGACGGGATCCGCAAGAACAAGCTCTTTGCCATTAATAAAATCAATG
GCCTTCGTGAAAAGTCCCTGCAGTACAATATCGACGATGCTGGACTTTTTGATCTGCTGTTTAAGCCCTCCTTTGCCGAC
CAAAAAGGTGAGCTTTCTGCACCTCTGGAAGGTGTGATCACCCGCAAATTTGGACTTATGAAAGGGCAGGATCACCCCTA
TACTTTAACTCACAAGGGAATCTTTATTTCAGCGGCCAGGGGTAGCAATATCAAAGCCGTGTTTGAAGGCAGGGTTTCTT
ATGTCGGAACGCTTCCGGGCTTTGGAACAACTCTGATTGTGGATCATGGAGATCACTACTACAGCGTCTATTCCCATGCA
CAAGAAGTGAAAGTGAACACCGGTGATGAGGTCACGGGATCTCAGGTGCTGGCGCAAGTGGGTGAAGCCCCGCAAGACGG
CAGTTCCGGACTGTATTTTGAAATTAGACATTTTTCCGAACCCTACGACCCGCAACAGTGGATGAAAGGACTCTAA

Upstream 100 bases:

>100_bases
TGGTGACTTTCGTTGTCGCCGGCACAGGTCTGGGGGCCTTGGGTTCTTATCTGTGTGTGCGCCGTATGAATGACGGCTTT
GCCGGAAGTCAGGGGTAGTT

Downstream 100 bases:

>100_bases
CACTATGCAATCACTCAAACGCTACTGGAAAACCTATATTTTGGGCGGCGCCCTTCTGCTGGTTTTGTTCATCATGGCAG
AAACAGGTTTCCAGGTTAGA

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKIAQILLVLGLSLTLGAKAANPTEVDSLAKDFEATKKKLEDAELKQRQVLSALYQLNKKIKKIVTEKGEMSQQRAFLEV
NIRNLTQKVEDLDQKSRQQRTLLAERLRAMYKLGGPSIARFLFSSSSSASLERNLKILGVVAARDLELIKNYSRDLKDLE
AKRKTLAQRLDSMKSVEQKIALQEKALRKEQDLKGKLLDGIRKNKLFAINKINGLREKSLQYNIDDAGLFDLLFKPSFAD
QKGELSAPLEGVITRKFGLMKGQDHPYTLTHKGIFISAARGSNIKAVFEGRVSYVGTLPGFGTTLIVDHGDHYYSVYSHA
QEVKVNTGDEVTGSQVLAQVGEAPQDGSSGLYFEIRHFSEPYDPQQWMKGL

Sequences:

>Translated_371_residues
MKIAQILLVLGLSLTLGAKAANPTEVDSLAKDFEATKKKLEDAELKQRQVLSALYQLNKKIKKIVTEKGEMSQQRAFLEV
NIRNLTQKVEDLDQKSRQQRTLLAERLRAMYKLGGPSIARFLFSSSSSASLERNLKILGVVAARDLELIKNYSRDLKDLE
AKRKTLAQRLDSMKSVEQKIALQEKALRKEQDLKGKLLDGIRKNKLFAINKINGLREKSLQYNIDDAGLFDLLFKPSFAD
QKGELSAPLEGVITRKFGLMKGQDHPYTLTHKGIFISAARGSNIKAVFEGRVSYVGTLPGFGTTLIVDHGDHYYSVYSHA
QEVKVNTGDEVTGSQVLAQVGEAPQDGSSGLYFEIRHFSEPYDPQQWMKGL
>Mature_371_residues
MKIAQILLVLGLSLTLGAKAANPTEVDSLAKDFEATKKKLEDAELKQRQVLSALYQLNKKIKKIVTEKGEMSQQRAFLEV
NIRNLTQKVEDLDQKSRQQRTLLAERLRAMYKLGGPSIARFLFSSSSSASLERNLKILGVVAARDLELIKNYSRDLKDLE
AKRKTLAQRLDSMKSVEQKIALQEKALRKEQDLKGKLLDGIRKNKLFAINKINGLREKSLQYNIDDAGLFDLLFKPSFAD
QKGELSAPLEGVITRKFGLMKGQDHPYTLTHKGIFISAARGSNIKAVFEGRVSYVGTLPGFGTTLIVDHGDHYYSVYSHA
QEVKVNTGDEVTGSQVLAQVGEAPQDGSSGLYFEIRHFSEPYDPQQWMKGL

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibP [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=128, Percent_Identity=32.8125, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI87082174, Length=107, Percent_Identity=35.5140186915888, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=33.6065573770492, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 41517; Mature: 41517

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAQILLVLGLSLTLGAKAANPTEVDSLAKDFEATKKKLEDAELKQRQVLSALYQLNKK
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKIVTEKGEMSQQRAFLEVNIRNLTQKVEDLDQKSRQQRTLLAERLRAMYKLGGPSIAR
HHHHHHCCCCHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FLFSSSSSASLERNLKILGVVAARDLELIKNYSRDLKDLEAKRKTLAQRLDSMKSVEQKI
HHHCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALQEKALRKEQDLKGKLLDGIRKNKLFAINKINGLREKSLQYNIDDAGLFDLLFKPSFAD
HHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCHHHHCCEECCCCCHHHHHHHCCCCCC
QKGELSAPLEGVITRKFGLMKGQDHPYTLTHKGIFISAARGSNIKAVFEGRVSYVGTLPG
CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCEEEEECCHHEEECCCC
FGTTLIVDHGDHYYSVYSHAQEVKVNTGDEVTGSQVLAQVGEAPQDGSSGLYFEIRHFSE
CCCEEEEECCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCC
PYDPQQWMKGL
CCCHHHHHCCC
>Mature Secondary Structure
MKIAQILLVLGLSLTLGAKAANPTEVDSLAKDFEATKKKLEDAELKQRQVLSALYQLNKK
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKIVTEKGEMSQQRAFLEVNIRNLTQKVEDLDQKSRQQRTLLAERLRAMYKLGGPSIAR
HHHHHHCCCCHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FLFSSSSSASLERNLKILGVVAARDLELIKNYSRDLKDLEAKRKTLAQRLDSMKSVEQKI
HHHCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALQEKALRKEQDLKGKLLDGIRKNKLFAINKINGLREKSLQYNIDDAGLFDLLFKPSFAD
HHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCHHHHCCEECCCCCHHHHHHHCCCCCC
QKGELSAPLEGVITRKFGLMKGQDHPYTLTHKGIFISAARGSNIKAVFEGRVSYVGTLPG
CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCEEEEECCHHEEECCCC
FGTTLIVDHGDHYYSVYSHAQEVKVNTGDEVTGSQVLAQVGEAPQDGSSGLYFEIRHFSE
CCCEEEEECCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCC
PYDPQQWMKGL
CCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]