Click here to switch to the map view.

The map label for this gene is motB [H]

Identifier: 42521782

GI number: 42521782

Start: 129082

End: 129831

Strand: Direct

Name: motB [H]

Synonym: Bd0145

Alternate gene names: 42521782

Gene position: 129082-129831 (Clockwise)

Preceding gene: 42521781

Following gene: 42521785

Centisome position: 3.41

GC content: 49.47

Gene sequence:

>750_bases
ATGGCAAAAAAACACCGCAAACACGAAGAACATGAGAACCATGAGAGATGGCTGGTCTCTTATGCGGATTTCATCACTCT
GCTGTTTGCCTTTTTTGTTGTCATGTACGCCACTTCGACTTCCAACGAAGAAAAACAAAAAGAGTTTGAAGACTCCGTGA
AGTTGAGCTTGCATCTGGTGGGCCGGGGCGGGTCCGATGCAGATTCCAATTCGATTGGCAGTATTATCGGTGAGTTGGAA
ATGCCGGTCGGGAATTTCCCTAAAAAGGGCGGTCCCGGCGAGGTCGAAGACTATGTGGAAAGGTCTCTGGATAAGTCCAT
GGACAGTGCGCAGAAAAAGCTGGCCATTCAGGATGTTTATCATGATGCCGTGGGGGTGAGGATTGCTCTTGCCGCTTCGA
CATTCTTCCAAGAGGGCTCCGCAAAACTAAAACCTGAAGCCCTTAAGAGCCTTGATAAGGTTGCAGATGTTCTAAAGACC
CATAAAAAAAGAATTATTATCGAAGGTCATACCGATGATCTGCCGATTGCGGGCACACTCTTCCCAAGCAACTGGGAGTT
GGCCGGGGGGCGTGCTTCCGCGGTCGTGCGCTATCTGGTGAAGGTGCACCAGATGGATCCAAAACGTTTTGTTTCATTAT
CTTACGGTGATCAGAAGCCGGTGGTGCCCAACGATAGTGATGAGCACCGGGCGATGAACCGCCGGATCGAGATTTTCATC
GTCACCGACAGTTCCAAGGTTGAAATTTAG

Upstream 100 bases:

>100_bases
AAGGGGGCCTTCTGATCGCCAGCGGAATGAATCCTGTGGTGCTGGAACAGAAGCTTTACGCCTATCTCGACAGCGATCAA
AAATAGGTCGGAAAGAATTC

Downstream 100 bases:

>100_bases
TTACTCTGACAAAAGCCCGTCGGGAATCTGGCCATTGGCGATCGCGGAGGCGATCTTCAGGTGTTCCGGACTGCCGATGA
TCTTGATTGCTTCTTCCAAT

Product: chemotaxis motB protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAKKHRKHEEHENHERWLVSYADFITLLFAFFVVMYATSTSNEEKQKEFEDSVKLSLHLVGRGGSDADSNSIGSIIGELE
MPVGNFPKKGGPGEVEDYVERSLDKSMDSAQKKLAIQDVYHDAVGVRIALAASTFFQEGSAKLKPEALKSLDKVADVLKT
HKKRIIIEGHTDDLPIAGTLFPSNWELAGGRASAVVRYLVKVHQMDPKRFVSLSYGDQKPVVPNDSDEHRAMNRRIEIFI
VTDSSKVEI

Sequences:

>Translated_249_residues
MAKKHRKHEEHENHERWLVSYADFITLLFAFFVVMYATSTSNEEKQKEFEDSVKLSLHLVGRGGSDADSNSIGSIIGELE
MPVGNFPKKGGPGEVEDYVERSLDKSMDSAQKKLAIQDVYHDAVGVRIALAASTFFQEGSAKLKPEALKSLDKVADVLKT
HKKRIIIEGHTDDLPIAGTLFPSNWELAGGRASAVVRYLVKVHQMDPKRFVSLSYGDQKPVVPNDSDEHRAMNRRIEIFI
VTDSSKVEI
>Mature_248_residues
AKKHRKHEEHENHERWLVSYADFITLLFAFFVVMYATSTSNEEKQKEFEDSVKLSLHLVGRGGSDADSNSIGSIIGELEM
PVGNFPKKGGPGEVEDYVERSLDKSMDSAQKKLAIQDVYHDAVGVRIALAASTFFQEGSAKLKPEALKSLDKVADVLKTH
KKRIIIEGHTDDLPIAGTLFPSNWELAGGRASAVVRYLVKVHQMDPKRFVSLSYGDQKPVVPNDSDEHRAMNRRIEIFIV
TDSSKVEI

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=267, Percent_Identity=30.3370786516854, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 27840; Mature: 27709

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKHRKHEEHENHERWLVSYADFITLLFAFFVVMYATSTSNEEKQKEFEDSVKLSLHLV
CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEE
GRGGSDADSNSIGSIIGELEMPVGNFPKKGGPGEVEDYVERSLDKSMDSAQKKLAIQDVY
ECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDAVGVRIALAASTFFQEGSAKLKPEALKSLDKVADVLKTHKKRIIIEGHTDDLPIAGTL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEE
FPSNWELAGGRASAVVRYLVKVHQMDPKRFVSLSYGDQKPVVPNDSDEHRAMNRRIEIFI
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCHHHHHHCCEEEEEE
VTDSSKVEI
EECCCCCCC
>Mature Secondary Structure 
AKKHRKHEEHENHERWLVSYADFITLLFAFFVVMYATSTSNEEKQKEFEDSVKLSLHLV
CCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEE
GRGGSDADSNSIGSIIGELEMPVGNFPKKGGPGEVEDYVERSLDKSMDSAQKKLAIQDVY
ECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDAVGVRIALAASTFFQEGSAKLKPEALKSLDKVADVLKTHKKRIIIEGHTDDLPIAGTL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEE
FPSNWELAGGRASAVVRYLVKVHQMDPKRFVSLSYGDQKPVVPNDSDEHRAMNRRIEIFI
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCHHHHHHCCEEEEEE
VTDSSKVEI
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]