Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521699

Identifier: 42521699

GI number: 42521699

Start: 44375

End: 46489

Strand: Direct

Name: 42521699

Synonym: Bd0051

Alternate gene names: NA

Gene position: 44375-46489 (Clockwise)

Preceding gene: 42521698

Following gene: 42521701

Centisome position: 1.17

GC content: 51.82

Gene sequence:

>2115_bases
TTGCAAGGAATGCGACTGAAGCGGTTCATATTACCGCTCCTGGTATTAGCTGGAAGCTTATACTGGTCAAGCCCCACAGG
TGGCTTGAAGTTCATACCTATTTATGAAGCCCTCACCATCAAAGCTCAGAAAAATTCTCCACCACATATCGCCTTTGAAG
AACTGCTGGAATCCGAGAGGCAACTTGCAGAGTGGTCAAGAATCGAAAAAGTGAAACCATTGAATCTTGCCGCAGAAAAG
TCCACCGCACCGCTGTTTGCGAAGCGTGTGGAAATCGCTGAAATGGTGATTCAAAAAACTCCGGAAAGATTTGTCGCGGA
AGCACCATCCACAACAACGGTGGATGCCGATCCGACGGCATGGATGAATGATCTTTCCCCTGCTCAAGCCAAGCGTCTGC
AAGCCGCTCAAAGCCGCAGCGAAGTGATGGGTCAGGACTGGAGCCAGCCAACGTGGTCTGACATGGCCAAAGAGGTTCTG
GAAAAATCCGGCGTGATGACGGCGACAACATCCTCCAACCCACGTGTGTATGTGGCGGGTGTGGATGCTTCCGGCAAAGC
CAACACCAAAATTCCCCAGGCTGAAGTGCGCATCCCGGATCGCAACAACCAACCCTCTGATGACGGCATGAATCCTTCCT
ATGGTTTGGTGGAAGAACAAAGACCGGCGGGCATTCGCACGATCTCGGGTCCTTTGGAAATCACCGGCGGCCTGGCGGTC
ACCAATGAACATCATATTGAAATCCGTCGCAGTGACGAAGGTGTCTTAAAAGAACTGGGCAAGGTCAATCTTGTTCAGGG
TCAGTATAATATAGATGTCGAAGATGTGACCGGATCCATCATTGCCCGTCTGGTGGACAAAGAGGGTAAAACCCTGGGTG
AAGGCAGCTTCCGCTTAAATCGTGTGGCCTCGATTGCGCAAAACCGTTTGCAGGGACCGAAGATTCGCATCGAACCACAT
CCTGACTTTGGCGGCATTGTTACAAGTGCTTACAATCCAAAGCCGGATGATGCAGCTCCCGCCAAGACTCTGGTGACCTT
TGTAAAAGGTGCCAAAGAAGTCGCACCGAAAAAAGACGGAGCCGTGGCGATGGATAATGTGACCAAAGGATCCACGACGG
TGATGCGCGCGGCAGCGCCTTCGCACATGCAAACAGCGTCCATTGTGGTTTCGGGTCAGGAATTTAAGACGCCTCTTTAT
CCGGCTTCGATGATCCAGGCCCTGCAGGACATTTTGAGCCAGCAAAGACAGATGTCCTTTGAAGGCGCACCAACCATCAT
CTGGGGTAAGGTCAGCCTTGATGGCAAAACACTTTCCGGAATTGATGTGGTTGTCGAATCAGATCCAAGTCTTGTGCCGG
TTTACTTTAATCAGTTCATGCTTCCGGATCCAAGTTTGAAATCCACCGGTGACAACGGTCTGTTTGCCTTTGTGAATGCG
GAGCCAGGCTTCCATTCCCTGCTGGCAACCCGAGCCGAGGCAATTGTGGGTTATCAGAACGTGGTGGTGGAAGAAGGCTC
TGTGGCTCAAGGGGACATTCAGTCCACTATGAAAAACGAAGCCGTTCCGCTGCGGGTGTATGACGCCTTTGCGGGCGATG
CGGTTCCGGCCACCGTGACCATGCAAAGCTTGCAGAGCGAATTTGAAGTTCAGGGTGCCACGACGGTGACTTTGCCGAAC
CTGAAGCGCTATGGTCTAATGCGAGTACAGCCTGAGGGCACCGACTATGTGGCGGCGAGATATGTTTACAATGACAACGA
CGAATACGTGCACGCCCCGGTGGTTCGCTGGTCATGGCTGAGCGCTATCAAAGGTTATCTGAAGATTGATGATCTGCCGA
CGGCGGGTGTGATTGTGGGCTTTGTTCCGGATGAAAACTTTGAAGTTTATCTGGCAGCATATGATTCATTCAACCCGCGC
CAGATTGTGTACTTCGATATGCAAGGCCGTATCCTGCAAAATGGCAAGGGCATCGCGGGTGGTGGTTTCATTCTTTACAA
CGTTCCTGAAGACATTCACGAAGTTGTGGTGGTGGGCGAAAGAACGCAGAAGATCTATTCCCGCGTTCTGCCCGTGGATC
CAAACACGCTGTCCGTGCTTAGTTTCCGAGAGTAA

Upstream 100 bases:

>100_bases
AACCAAAGTCGCGACAGTCGTAACGTCATTGACGACTTCCGTTCCTTCTAAATACGATAAAGGCTAGTCAGAAATGACTA
TTCTTCAAATGAGGTGACTG

Downstream 100 bases:

>100_bases
ATTCAGAAACACATTTCTTGAAATAGTTCCCGCGATCTTCAAAGGACTTGAATTCATCAAGACTGGTTCCGCCCGGGCTT
AGTAATACTGTATCACCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 704; Mature: 704

Protein sequence:

>704_residues
MQGMRLKRFILPLLVLAGSLYWSSPTGGLKFIPIYEALTIKAQKNSPPHIAFEELLESERQLAEWSRIEKVKPLNLAAEK
STAPLFAKRVEIAEMVIQKTPERFVAEAPSTTTVDADPTAWMNDLSPAQAKRLQAAQSRSEVMGQDWSQPTWSDMAKEVL
EKSGVMTATTSSNPRVYVAGVDASGKANTKIPQAEVRIPDRNNQPSDDGMNPSYGLVEEQRPAGIRTISGPLEITGGLAV
TNEHHIEIRRSDEGVLKELGKVNLVQGQYNIDVEDVTGSIIARLVDKEGKTLGEGSFRLNRVASIAQNRLQGPKIRIEPH
PDFGGIVTSAYNPKPDDAAPAKTLVTFVKGAKEVAPKKDGAVAMDNVTKGSTTVMRAAAPSHMQTASIVVSGQEFKTPLY
PASMIQALQDILSQQRQMSFEGAPTIIWGKVSLDGKTLSGIDVVVESDPSLVPVYFNQFMLPDPSLKSTGDNGLFAFVNA
EPGFHSLLATRAEAIVGYQNVVVEEGSVAQGDIQSTMKNEAVPLRVYDAFAGDAVPATVTMQSLQSEFEVQGATTVTLPN
LKRYGLMRVQPEGTDYVAARYVYNDNDEYVHAPVVRWSWLSAIKGYLKIDDLPTAGVIVGFVPDENFEVYLAAYDSFNPR
QIVYFDMQGRILQNGKGIAGGGFILYNVPEDIHEVVVVGERTQKIYSRVLPVDPNTLSVLSFRE

Sequences:

>Translated_704_residues
MQGMRLKRFILPLLVLAGSLYWSSPTGGLKFIPIYEALTIKAQKNSPPHIAFEELLESERQLAEWSRIEKVKPLNLAAEK
STAPLFAKRVEIAEMVIQKTPERFVAEAPSTTTVDADPTAWMNDLSPAQAKRLQAAQSRSEVMGQDWSQPTWSDMAKEVL
EKSGVMTATTSSNPRVYVAGVDASGKANTKIPQAEVRIPDRNNQPSDDGMNPSYGLVEEQRPAGIRTISGPLEITGGLAV
TNEHHIEIRRSDEGVLKELGKVNLVQGQYNIDVEDVTGSIIARLVDKEGKTLGEGSFRLNRVASIAQNRLQGPKIRIEPH
PDFGGIVTSAYNPKPDDAAPAKTLVTFVKGAKEVAPKKDGAVAMDNVTKGSTTVMRAAAPSHMQTASIVVSGQEFKTPLY
PASMIQALQDILSQQRQMSFEGAPTIIWGKVSLDGKTLSGIDVVVESDPSLVPVYFNQFMLPDPSLKSTGDNGLFAFVNA
EPGFHSLLATRAEAIVGYQNVVVEEGSVAQGDIQSTMKNEAVPLRVYDAFAGDAVPATVTMQSLQSEFEVQGATTVTLPN
LKRYGLMRVQPEGTDYVAARYVYNDNDEYVHAPVVRWSWLSAIKGYLKIDDLPTAGVIVGFVPDENFEVYLAAYDSFNPR
QIVYFDMQGRILQNGKGIAGGGFILYNVPEDIHEVVVVGERTQKIYSRVLPVDPNTLSVLSFRE
>Mature_704_residues
MQGMRLKRFILPLLVLAGSLYWSSPTGGLKFIPIYEALTIKAQKNSPPHIAFEELLESERQLAEWSRIEKVKPLNLAAEK
STAPLFAKRVEIAEMVIQKTPERFVAEAPSTTTVDADPTAWMNDLSPAQAKRLQAAQSRSEVMGQDWSQPTWSDMAKEVL
EKSGVMTATTSSNPRVYVAGVDASGKANTKIPQAEVRIPDRNNQPSDDGMNPSYGLVEEQRPAGIRTISGPLEITGGLAV
TNEHHIEIRRSDEGVLKELGKVNLVQGQYNIDVEDVTGSIIARLVDKEGKTLGEGSFRLNRVASIAQNRLQGPKIRIEPH
PDFGGIVTSAYNPKPDDAAPAKTLVTFVKGAKEVAPKKDGAVAMDNVTKGSTTVMRAAAPSHMQTASIVVSGQEFKTPLY
PASMIQALQDILSQQRQMSFEGAPTIIWGKVSLDGKTLSGIDVVVESDPSLVPVYFNQFMLPDPSLKSTGDNGLFAFVNA
EPGFHSLLATRAEAIVGYQNVVVEEGSVAQGDIQSTMKNEAVPLRVYDAFAGDAVPATVTMQSLQSEFEVQGATTVTLPN
LKRYGLMRVQPEGTDYVAARYVYNDNDEYVHAPVVRWSWLSAIKGYLKIDDLPTAGVIVGFVPDENFEVYLAAYDSFNPR
QIVYFDMQGRILQNGKGIAGGGFILYNVPEDIHEVVVVGERTQKIYSRVLPVDPNTLSVLSFRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76870; Mature: 76870

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGMRLKRFILPLLVLAGSLYWSSPTGGLKFIPIYEALTIKAQKNSPPHIAFEELLESER
CCCCHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHH
QLAEWSRIEKVKPLNLAAEKSTAPLFAKRVEIAEMVIQKTPERFVAEAPSTTTVDADPTA
HHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCH
WMNDLSPAQAKRLQAAQSRSEVMGQDWSQPTWSDMAKEVLEKSGVMTATTSSNPRVYVAG
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEE
VDASGKANTKIPQAEVRIPDRNNQPSDDGMNPSYGLVEEQRPAGIRTISGPLEITGGLAV
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCEEE
TNEHHIEIRRSDEGVLKELGKVNLVQGQYNIDVEDVTGSIIARLVDKEGKTLGEGSFRLN
CCCCEEEEEECCCHHHHHCCCEEEEECEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RVASIAQNRLQGPKIRIEPHPDFGGIVTSAYNPKPDDAAPAKTLVTFVKGAKEVAPKKDG
HHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
AVAMDNVTKGSTTVMRAAAPSHMQTASIVVSGQEFKTPLYPASMIQALQDILSQQRQMSF
CEEECCCCCCCCEEEEECCCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCC
EGAPTIIWGKVSLDGKTLSGIDVVVESDPSLVPVYFNQFMLPDPSLKSTGDNGLFAFVNA
CCCCEEEEEEEEECCCEECCEEEEEECCCCEEEEECCCEECCCCCCCCCCCCCEEEEEEC
EPGFHSLLATRAEAIVGYQNVVVEEGSVAQGDIQSTMKNEAVPLRVYDAFAGDAVPATVT
CCCHHHHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCHHHH
MQSLQSEFEVQGATTVTLPNLKRYGLMRVQPEGTDYVAARYVYNDNDEYVHAPVVRWSWL
HHHHHHHHEECCCEEEECCCCHHCCEEEECCCCCCEEEEEEEECCCCCEEEECHHHHHHH
SAIKGYLKIDDLPTAGVIVGFVPDENFEVYLAAYDSFNPRQIVYFDMQGRILQNGKGIAG
HHHCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCEEEECCCCEEC
GGFILYNVPEDIHEVVVVGERTQKIYSRVLPVDPNTLSVLSFRE
CCEEEECCCCCCCCEEEECHHHHHHHHHCCCCCCCCEEEEEECC
>Mature Secondary Structure
MQGMRLKRFILPLLVLAGSLYWSSPTGGLKFIPIYEALTIKAQKNSPPHIAFEELLESER
CCCCHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHH
QLAEWSRIEKVKPLNLAAEKSTAPLFAKRVEIAEMVIQKTPERFVAEAPSTTTVDADPTA
HHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCH
WMNDLSPAQAKRLQAAQSRSEVMGQDWSQPTWSDMAKEVLEKSGVMTATTSSNPRVYVAG
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEE
VDASGKANTKIPQAEVRIPDRNNQPSDDGMNPSYGLVEEQRPAGIRTISGPLEITGGLAV
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCEEE
TNEHHIEIRRSDEGVLKELGKVNLVQGQYNIDVEDVTGSIIARLVDKEGKTLGEGSFRLN
CCCCEEEEEECCCHHHHHCCCEEEEECEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RVASIAQNRLQGPKIRIEPHPDFGGIVTSAYNPKPDDAAPAKTLVTFVKGAKEVAPKKDG
HHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
AVAMDNVTKGSTTVMRAAAPSHMQTASIVVSGQEFKTPLYPASMIQALQDILSQQRQMSF
CEEECCCCCCCCEEEEECCCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCC
EGAPTIIWGKVSLDGKTLSGIDVVVESDPSLVPVYFNQFMLPDPSLKSTGDNGLFAFVNA
CCCCEEEEEEEEECCCEECCEEEEEECCCCEEEEECCCEECCCCCCCCCCCCCEEEEEEC
EPGFHSLLATRAEAIVGYQNVVVEEGSVAQGDIQSTMKNEAVPLRVYDAFAGDAVPATVT
CCCHHHHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCHHHH
MQSLQSEFEVQGATTVTLPNLKRYGLMRVQPEGTDYVAARYVYNDNDEYVHAPVVRWSWL
HHHHHHHHEECCCEEEECCCCHHCCEEEECCCCCCEEEEEEEECCCCCEEEECHHHHHHH
SAIKGYLKIDDLPTAGVIVGFVPDENFEVYLAAYDSFNPRQIVYFDMQGRILQNGKGIAG
HHHCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCEEEECCCCEEC
GGFILYNVPEDIHEVVVVGERTQKIYSRVLPVDPNTLSVLSFRE
CCEEEECCCCCCCCEEEECHHHHHHHHHCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA