| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is ftsK [H]
Identifier: 42521689
GI number: 42521689
Start: 36142
End: 38535
Strand: Direct
Name: ftsK [H]
Synonym: Bd0041
Alternate gene names: 42521689
Gene position: 36142-38535 (Clockwise)
Preceding gene: 42521683
Following gene: 42521690
Centisome position: 0.96
GC content: 51.29
Gene sequence:
>2394_bases ATGAACCAATTCCTTAAAAAGTTTCGACAGGACGTCATTTCAATAGGCTTTTTAGGCTTGGGGCTTTTCCTCGCCCTGGC CCTTGTTAGCTACAACCCTATGGACCCTTCCCTAAATTCCATGGGACAGGGCCTAAGATCCACAAATTACTGCGGAATTG TCGGAAGCTTCCTGGCGGATATGCTGTATCAGGCGATGGGCCTGGCGGCCTGGGTTGTGGTGGCCTGTTTTGGCAAAATC GCCTATGCCAGCTTCAAGGGTGAATCCCTGAACCTAAAAAACATTCGTTTTGTCTGGGCTTTGCTGCTGATCGTGAACGT GGCGGCTTTGTTCAGTCTGTATCTGCCCAACACCAAGATCTTCCAGGGGCAGATCTATCTGGGGGGCCTTTTGGGTTTGG GCGTGTCCCAGGCGCTGATGCAGGCGTTTAACTCCGTGGGTGTGCAGGTGATTTTGTGGTCTTTGATGGCCGTGCTGGTG GTGTTCTATTCCGAACGCACGCTGCAGGAACTGGCAGAGATTCCCCAGGGTCTTTTTGCTGACATGAAAAAGAAAAAGTT CACCGACAAAATTGCGGCGTTCTTTTCTGGCATGTTCGTGAAGGAAGAAAAAACCAAGAAGTCCAAGAAAGACGAAAAAG CCAAAGCGGCGATCTTCCCTCTTTCCGATAAAAAATTCGTAGAAAAAGCATCTGAAGAAGAGGAAGAGGACGAGGAGCTG GAAGAGCTTCTGGCCGCGGCCGAAGAAGAGGATGAAGAAGAAGTCGAAGAAGACGAGGAAGAATCCGACGACGATGAAGA GGAAGAAGTTCCTGCTGTTCGTCTGGCGCAAAAACGCAAAGTCGTGATGAAAGCCAAGCCTCCGCGTCGTATTGAAAACT GGGATATGCCGAAATTGGCGTTGTTGGAAGATCCTCCAGCATCCCGAATCAAGATCGACAAGGCCGAGATTCAGCGCAAG GCCGATTCACTGGTTGAAAAATTGAAGAACTTCTCCATCGAAGGCAGCATCCAGGACGCCAAACCCGGCCCGCTGGTCAC GATGTATGAATTTAAACCCAATGCCGATGTGAAGATCTCAAAAATCTCAGAACTGGAAGACGATCTGTCTTTGGCATTGT CTTCAGAATCCGTGCGTGTGGTGGGTCACATCCCGGGCACTGATGTTGTGGGTATTGAAACCGCGAACTTAAAGCGTGAA ACCGTTTATTACAAAGACTTGATCGCGGAAGACACCTTCTGGAGCGAAGATCTGGCACTGCCGATGGCCGTGGGCCGTGC GGTGGATGGGGAACCAAAAGTTGTGGATCTGAGAAAGATGCCGCACTTGCTGATCGCCGGGACGACGGGTTCTGGTAAGT CCGTGTTCGTGGGCTCGATCATCACGGGTCTGTTGTTCAGACACTCACCGAAAACGCTGCGTTTGGTGCTGATTGACCCG AAAATGGTCGACTTAGCACCATTCTCGACCGTTCCGCATCTGGTGCTTCCGCATGTGACCGAGCCGAAGAAGGCTGCGAC TGCGCTGAAGTGGGCGGTGCGTGAGATGGAAAAACGTTATAAGTCCCTGTCGAAATTCGGTGTGGGTAAAATTGAAGCCT TCAACGAAAAGACCGGCAATCTTTCCAAGGCCGACGTGGAAGAGCACGAAAAGATCAATCAGGATCTGGAAGAAGGCAAA GCGAAGCTGGATCAGTACTATTACCAGCCACTGCCTTATATCGTGATCGTGGTGGATGAGTTGGCCGACTTGATGATCGT TGAAAAACAAAACATTGAAGAGCCGATCCAGCGTCTGACGCAAAAAGCCCGTGCCTGCGGAATCCATTTGATTCTGGCGA CACAGTCTCCGCGTAAAGACGTTGTGACCGGTTTGATTAAAACGAACATCCCAGGCCGAGTGGCTTTGAAAGTGGCGTCC AAGATGGATTCCCGTATCATCATCGATGACTCGGGCGCTGAACGTCTGCTGCCAAACGGGGATATGCTGTTCCAGGCGCC GGGTGTGGGAAAACCAACTCGTCACCATGGTCCTTATTTGTCAGACGCCGAAATCGGCAATGTCGTGAAACACTGGGCAT CGCAGGCAGAGCCGGAATACGATCCACTGGCGATGAAAGCCCTGGATGGATTTGCTGGCGGTGATGGCGGCGAAGCTGGT GGCGGCGACGGCGGCGGCTTTGGTGAAGAAGAGTATGATGAAAGATACGACGAGATTCTGTCTTGGGCTTCTGAGCAGAA AGAAATCTCTGCGTCTTTAATTCAGCGCAAATTCAGACTCGGTTATCCGCGTGCCGCCCGCATGATTGAGATCTTCGAAA AAGAAGGTGTTGTGGGGCCAGCGAATGGCAGCAAGCCGCGTCAAGTTCTTGTGAGTAGTTACAGAGAACAATAA
Upstream 100 bases:
>100_bases TTAAGCATTTGACTGGCTCTTTGTCGGGCATACCGGGGCTTAAGTCAAGGAAGGCCCCGGGGAGCATGACTAACTGCTGG GAATTTCGTAAATTTTTTAA
Downstream 100 bases:
>100_bases ATAGAGTCTTGACTGCACCACCCTTGGTCGTGGTCTCATTAGGAGACCATATAACCATTCAAGGAGGAATTTATGTTCAA GGCTCTTATTGCGGCCCTAG
Product: cell division protein FtsK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 797; Mature: 797
Protein sequence:
>797_residues MNQFLKKFRQDVISIGFLGLGLFLALALVSYNPMDPSLNSMGQGLRSTNYCGIVGSFLADMLYQAMGLAAWVVVACFGKI AYASFKGESLNLKNIRFVWALLLIVNVAALFSLYLPNTKIFQGQIYLGGLLGLGVSQALMQAFNSVGVQVILWSLMAVLV VFYSERTLQELAEIPQGLFADMKKKKFTDKIAAFFSGMFVKEEKTKKSKKDEKAKAAIFPLSDKKFVEKASEEEEEDEEL EELLAAAEEEDEEEVEEDEEESDDDEEEEVPAVRLAQKRKVVMKAKPPRRIENWDMPKLALLEDPPASRIKIDKAEIQRK ADSLVEKLKNFSIEGSIQDAKPGPLVTMYEFKPNADVKISKISELEDDLSLALSSESVRVVGHIPGTDVVGIETANLKRE TVYYKDLIAEDTFWSEDLALPMAVGRAVDGEPKVVDLRKMPHLLIAGTTGSGKSVFVGSIITGLLFRHSPKTLRLVLIDP KMVDLAPFSTVPHLVLPHVTEPKKAATALKWAVREMEKRYKSLSKFGVGKIEAFNEKTGNLSKADVEEHEKINQDLEEGK AKLDQYYYQPLPYIVIVVDELADLMIVEKQNIEEPIQRLTQKARACGIHLILATQSPRKDVVTGLIKTNIPGRVALKVAS KMDSRIIIDDSGAERLLPNGDMLFQAPGVGKPTRHHGPYLSDAEIGNVVKHWASQAEPEYDPLAMKALDGFAGGDGGEAG GGDGGGFGEEEYDERYDEILSWASEQKEISASLIQRKFRLGYPRAARMIEIFEKEGVVGPANGSKPRQVLVSSYREQ
Sequences:
>Translated_797_residues MNQFLKKFRQDVISIGFLGLGLFLALALVSYNPMDPSLNSMGQGLRSTNYCGIVGSFLADMLYQAMGLAAWVVVACFGKI AYASFKGESLNLKNIRFVWALLLIVNVAALFSLYLPNTKIFQGQIYLGGLLGLGVSQALMQAFNSVGVQVILWSLMAVLV VFYSERTLQELAEIPQGLFADMKKKKFTDKIAAFFSGMFVKEEKTKKSKKDEKAKAAIFPLSDKKFVEKASEEEEEDEEL EELLAAAEEEDEEEVEEDEEESDDDEEEEVPAVRLAQKRKVVMKAKPPRRIENWDMPKLALLEDPPASRIKIDKAEIQRK ADSLVEKLKNFSIEGSIQDAKPGPLVTMYEFKPNADVKISKISELEDDLSLALSSESVRVVGHIPGTDVVGIETANLKRE TVYYKDLIAEDTFWSEDLALPMAVGRAVDGEPKVVDLRKMPHLLIAGTTGSGKSVFVGSIITGLLFRHSPKTLRLVLIDP KMVDLAPFSTVPHLVLPHVTEPKKAATALKWAVREMEKRYKSLSKFGVGKIEAFNEKTGNLSKADVEEHEKINQDLEEGK AKLDQYYYQPLPYIVIVVDELADLMIVEKQNIEEPIQRLTQKARACGIHLILATQSPRKDVVTGLIKTNIPGRVALKVAS KMDSRIIIDDSGAERLLPNGDMLFQAPGVGKPTRHHGPYLSDAEIGNVVKHWASQAEPEYDPLAMKALDGFAGGDGGEAG GGDGGGFGEEEYDERYDEILSWASEQKEISASLIQRKFRLGYPRAARMIEIFEKEGVVGPANGSKPRQVLVSSYREQ >Mature_797_residues MNQFLKKFRQDVISIGFLGLGLFLALALVSYNPMDPSLNSMGQGLRSTNYCGIVGSFLADMLYQAMGLAAWVVVACFGKI AYASFKGESLNLKNIRFVWALLLIVNVAALFSLYLPNTKIFQGQIYLGGLLGLGVSQALMQAFNSVGVQVILWSLMAVLV VFYSERTLQELAEIPQGLFADMKKKKFTDKIAAFFSGMFVKEEKTKKSKKDEKAKAAIFPLSDKKFVEKASEEEEEDEEL EELLAAAEEEDEEEVEEDEEESDDDEEEEVPAVRLAQKRKVVMKAKPPRRIENWDMPKLALLEDPPASRIKIDKAEIQRK ADSLVEKLKNFSIEGSIQDAKPGPLVTMYEFKPNADVKISKISELEDDLSLALSSESVRVVGHIPGTDVVGIETANLKRE TVYYKDLIAEDTFWSEDLALPMAVGRAVDGEPKVVDLRKMPHLLIAGTTGSGKSVFVGSIITGLLFRHSPKTLRLVLIDP KMVDLAPFSTVPHLVLPHVTEPKKAATALKWAVREMEKRYKSLSKFGVGKIEAFNEKTGNLSKADVEEHEKINQDLEEGK AKLDQYYYQPLPYIVIVVDELADLMIVEKQNIEEPIQRLTQKARACGIHLILATQSPRKDVVTGLIKTNIPGRVALKVAS KMDSRIIIDDSGAERLLPNGDMLFQAPGVGKPTRHHGPYLSDAEIGNVVKHWASQAEPEYDPLAMKALDGFAGGDGGEAG GGDGGGFGEEEYDERYDEILSWASEQKEISASLIQRKFRLGYPRAARMIEIFEKEGVVGPANGSKPRQVLVSSYREQ
Specific function: DNA motor protein, which is both required to move DNA out of the region of the septum during cell division and for the septum formation. Tracks DNA in an ATP-dependent manner by generating positive supercoils in front of it and negative supercoils behind
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein; Cytoplasmic side. Note=Located at the septum. The large C-terminal part of the protein is cytoplasmic (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FtsK domain [H]
Homologues:
Organism=Escherichia coli, GI1787117, Length=496, Percent_Identity=42.1370967741936, Blast_Score=384, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR018541 - InterPro: IPR002543 [H]
Pfam domain/function: PF09397 Ftsk_gamma; PF01580 FtsK_SpoIIIE [H]
EC number: NA
Molecular weight: Translated: 88340; Mature: 88340
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQFLKKFRQDVISIGFLGLGLFLALALVSYNPMDPSLNSMGQGLRSTNYCGIVGSFLAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHH MLYQAMGLAAWVVVACFGKIAYASFKGESLNLKNIRFVWALLLIVNVAALFSLYLPNTKI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE FQGQIYLGGLLGLGVSQALMQAFNSVGVQVILWSLMAVLVVFYSERTLQELAEIPQGLFA EECEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMKKKKFTDKIAAFFSGMFVKEEKTKKSKKDEKAKAAIFPLSDKKFVEKASEEEEEDEEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHH EELLAAAEEEDEEEVEEDEEESDDDEEEEVPAVRLAQKRKVVMKAKPPRRIENWDMPKLA HHHHHHHCCCCHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE LLEDPPASRIKIDKAEIQRKADSLVEKLKNFSIEGSIQDAKPGPLVTMYEFKPNADVKIS EECCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEH KISELEDDLSLALSSESVRVVGHIPGTDVVGIETANLKRETVYYKDLIAEDTFWSEDLAL HHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCH PMAVGRAVDGEPKVVDLRKMPHLLIAGTTGSGKSVFVGSIITGLLFRHSPKTLRLVLIDP HHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECC KMVDLAPFSTVPHLVLPHVTEPKKAATALKWAVREMEKRYKSLSKFGVGKIEAFNEKTGN CEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC LSKADVEEHEKINQDLEEGKAKLDQYYYQPLPYIVIVVDELADLMIVEKQNIEEPIQRLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHH QKARACGIHLILATQSPRKDVVTGLIKTNIPGRVALKVASKMDSRIIIDDSGAERLLPNG HHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCC DMLFQAPGVGKPTRHHGPYLSDAEIGNVVKHWASQAEPEYDPLAMKALDGFAGGDGGEAG CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC GGDGGGFGEEEYDERYDEILSWASEQKEISASLIQRKFRLGYPRAARMIEIFEKEGVVGP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC ANGSKPRQVLVSSYREQ CCCCCHHHHHHHHHCCC >Mature Secondary Structure MNQFLKKFRQDVISIGFLGLGLFLALALVSYNPMDPSLNSMGQGLRSTNYCGIVGSFLAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHH MLYQAMGLAAWVVVACFGKIAYASFKGESLNLKNIRFVWALLLIVNVAALFSLYLPNTKI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE FQGQIYLGGLLGLGVSQALMQAFNSVGVQVILWSLMAVLVVFYSERTLQELAEIPQGLFA EECEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMKKKKFTDKIAAFFSGMFVKEEKTKKSKKDEKAKAAIFPLSDKKFVEKASEEEEEDEEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHH EELLAAAEEEDEEEVEEDEEESDDDEEEEVPAVRLAQKRKVVMKAKPPRRIENWDMPKLA HHHHHHHCCCCHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE LLEDPPASRIKIDKAEIQRKADSLVEKLKNFSIEGSIQDAKPGPLVTMYEFKPNADVKIS EECCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEH KISELEDDLSLALSSESVRVVGHIPGTDVVGIETANLKRETVYYKDLIAEDTFWSEDLAL HHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCH PMAVGRAVDGEPKVVDLRKMPHLLIAGTTGSGKSVFVGSIITGLLFRHSPKTLRLVLIDP HHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECC KMVDLAPFSTVPHLVLPHVTEPKKAATALKWAVREMEKRYKSLSKFGVGKIEAFNEKTGN CEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC LSKADVEEHEKINQDLEEGKAKLDQYYYQPLPYIVIVVDELADLMIVEKQNIEEPIQRLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHH QKARACGIHLILATQSPRKDVVTGLIKTNIPGRVALKVASKMDSRIIIDDSGAERLLPNG HHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCC DMLFQAPGVGKPTRHHGPYLSDAEIGNVVKHWASQAEPEYDPLAMKALDGFAGGDGGEAG CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC GGDGGGFGEEEYDERYDEILSWASEQKEISASLIQRKFRLGYPRAARMIEIFEKEGVVGP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC ANGSKPRQVLVSSYREQ CCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA