| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38638031
Identifier: 38638031
GI number: 38638031
Start: 383738
End: 384589
Strand: Direct
Name: 38638031
Synonym: PHG370
Alternate gene names: NA
Gene position: 383738-384589 (Clockwise)
Preceding gene: 38638030
Following gene: 38638032
Centisome position: 84.87
GC content: 60.68
Gene sequence:
>852_bases ATGACCACGACCGATCTGACCCCTGCAGATGAGCCGCTCCAGGAAGTTGGTCCGACCGACGATACTGTTGCACTGCTCGC TGAACCGCCTACCACGCTTGGCTCGATTGATAGCTCCGGCGATGTCGAGACAGAGCTCGCGGAGATGGAGCAGTCGGCCG ACGTATTGCGCAACGAGGGTCTGATCTCGACAGCGGACCATGAGGAGCGCAAGGCCAAAGTGGAACGTACTCGCAAGTTG TTTCGTGATCTGCCCTCCGAGGACCGCCAGGCGATCGTTCGCCGTCGTCGCGAACTCGGTCTGCTGATCCTCAATCGCGA GCTTGCCGGCGCGGCAGTCGTTCCCGTGGCGCTGAAGCTCAATCACACGCGCCTGCGCCCGCTCTTCGAGCAGTGGTGGC CATACATGAACCGCATGTCGCTGAACCTGCAGCGCTTCGGGGCGGCTACTTTCTCGCGCACCGAACTGTCGACGCTCGAG AACTACCTCGAACGCGAGCTCTCGAAGATCGAGGACTATGTGGACGAACAGCTGCGTGTGGCGAAAGCCTACCGCGAGCA ACGGGAACAGGAGATGCGAGCGAGAGGCGAGATCGTGTTCGTCCCGACGATCCAGCGCCCGTCCCTTGCGCTCGAGGTCC AGGCCTACTCGCGCTTTTCCGTGCGTGCCCTGCAGGTTCTGATCAAGTTCGATCAAACCATGGACCAGTTCGACTTTATG GTCTGGAACGGCATCCGTGACCAGAGCGACGTCAACGATGAAGTCACGCGCTTCCTACGCAAGTTCCAGCCGCTGGGCCT GCGCAGCTACACCACTCACCTGAGGTTGATGACGACGGTGCGCTGTATTTGA
Upstream 100 bases:
>100_bases CCTGCTCTGCTGGCGCCTTGCAGCGTCATTCCACGTCGGCAAGTAGCCGGCTCCGCAACGACTAACAAGGCCGGGTGTCC GGCCTCCTATAGGAGAAATC
Downstream 100 bases:
>100_bases CCACAGGAATTGATGTGACATGGTGTCACTTGGTGTGAGCTGGTGAGACCACGTGGGACATGATCTCACTTCCGAACGAA TCAATAGGCGTCGACATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTTTDLTPADEPLQEVGPTDDTVALLAEPPTTLGSIDSSGDVETELAEMEQSADVLRNEGLISTADHEERKAKVERTRKL FRDLPSEDRQAIVRRRRELGLLILNRELAGAAVVPVALKLNHTRLRPLFEQWWPYMNRMSLNLQRFGAATFSRTELSTLE NYLERELSKIEDYVDEQLRVAKAYREQREQEMRARGEIVFVPTIQRPSLALEVQAYSRFSVRALQVLIKFDQTMDQFDFM VWNGIRDQSDVNDEVTRFLRKFQPLGLRSYTTHLRLMTTVRCI
Sequences:
>Translated_283_residues MTTTDLTPADEPLQEVGPTDDTVALLAEPPTTLGSIDSSGDVETELAEMEQSADVLRNEGLISTADHEERKAKVERTRKL FRDLPSEDRQAIVRRRRELGLLILNRELAGAAVVPVALKLNHTRLRPLFEQWWPYMNRMSLNLQRFGAATFSRTELSTLE NYLERELSKIEDYVDEQLRVAKAYREQREQEMRARGEIVFVPTIQRPSLALEVQAYSRFSVRALQVLIKFDQTMDQFDFM VWNGIRDQSDVNDEVTRFLRKFQPLGLRSYTTHLRLMTTVRCI >Mature_282_residues TTTDLTPADEPLQEVGPTDDTVALLAEPPTTLGSIDSSGDVETELAEMEQSADVLRNEGLISTADHEERKAKVERTRKLF RDLPSEDRQAIVRRRRELGLLILNRELAGAAVVPVALKLNHTRLRPLFEQWWPYMNRMSLNLQRFGAATFSRTELSTLEN YLERELSKIEDYVDEQLRVAKAYREQREQEMRARGEIVFVPTIQRPSLALEVQAYSRFSVRALQVLIKFDQTMDQFDFMV WNGIRDQSDVNDEVTRFLRKFQPLGLRSYTTHLRLMTTVRCI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32762; Mature: 32631
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTDLTPADEPLQEVGPTDDTVALLAEPPTTLGSIDSSGDVETELAEMEQSADVLRNEG CCCCCCCCCCCHHHHCCCCCCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCC LISTADHEERKAKVERTRKLFRDLPSEDRQAIVRRRRELGLLILNRELAGAAVVPVALKL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHEEEE NHTRLRPLFEQWWPYMNRMSLNLQRFGAATFSRTELSTLENYLERELSKIEDYVDEQLRV CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAYREQREQEMRARGEIVFVPTIQRPSLALEVQAYSRFSVRALQVLIKFDQTMDQFDFM HHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH VWNGIRDQSDVNDEVTRFLRKFQPLGLRSYTTHLRLMTTVRCI HHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TTTDLTPADEPLQEVGPTDDTVALLAEPPTTLGSIDSSGDVETELAEMEQSADVLRNEG CCCCCCCCCCHHHHCCCCCCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCC LISTADHEERKAKVERTRKLFRDLPSEDRQAIVRRRRELGLLILNRELAGAAVVPVALKL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHEEEE NHTRLRPLFEQWWPYMNRMSLNLQRFGAATFSRTELSTLENYLERELSKIEDYVDEQLRV CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAYREQREQEMRARGEIVFVPTIQRPSLALEVQAYSRFSVRALQVLIKFDQTMDQFDFM HHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH VWNGIRDQSDVNDEVTRFLRKFQPLGLRSYTTHLRLMTTVRCI HHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA