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The map label for this gene is trbJ

Identifier: 38638024

GI number: 38638024

Start: 377343

End: 378101

Strand: Direct

Name: trbJ

Synonym: PHG363

Alternate gene names: NA

Gene position: 377343-378101 (Clockwise)

Preceding gene: 38638023

Following gene: 38638025

Centisome position: 83.45

GC content: 58.63

Gene sequence:

>759_bases
GTGAAGAAGTGGATCGCCAACATCGCCATCGCCACCTCGGTATTCGGGGCTTCTTCGGCCCATGCCGCGCTGCCCGTCAC
CGACTGGGTGGGACTCATTCAGACCACCATGACAGCAATGCAATCGCTGAAAACGGAGGTTTACGAGAATACCAATATCG
CCTACCAGTACAAGATGATGGCCAACCAGCTTCTGCAGTCCACGGGCCTGGACGCCGCCTCCCTGACGGAGCAGCTGGAC
GCGATCAAGGATGACATCGGCAAGTACGAGGTTTATGGCACTACGCTTAAGGACTTGTATGGCACTGTCTCCGACAACGC
CGACTATTTGAAGAAGATCCAGAGCATGGTCGTCGCCTCGGGCAAGACCAAGGAGCAATGGTTCCAGGACCAGCGCCAGC
TGCTGAGCAACGGCGACAAGACTGCCAAGAACCTGTTTAGTCTGGGCGAGCAAATCTTCAAGAACACTCAATCTGTCGCG
CAGCGCCGCCAGAAGATTCAGGCACAGGTCAAGCTCTCGCCGACGGCTCAGGCGGCGGCGCAATCCACCAATCAGATGCT
GGACGTTCTTGCCAGCCAGAACTCGGATTTGCTGCAGCTCATGAGCGTGCGGGCCCAAGCGGACGCGGATAAGGACCAAC
AGAGCGTCGCCAGGGAAACGCAAAGCGCTGAGGCTATGCGCGCGATCACGACTGCGCAGGATGAGGAGCTCCGGCAGTTG
CGTGCCCGGGTGTTCTCTCGCAAGCTGCAAGCCGACTGA

Upstream 100 bases:

>100_bases
GTCCATCTGCGACAAGCACCATGCATCGGGCGGACCCGACTGGCAAGACCGCTACGTGCGCGAAATGCTCGCGCGCGCAG
CATAACTTTGGAGAAGCAAC

Downstream 100 bases:

>100_bases
GCGGGTGCCAGGAAGCCATGCTATTGCGTCTATTGATTCTACTGGTCACTGCTGCGCTATTGCACGCAAACGTGGCTTTC
GCTCAGACCGAGATTCCCCC

Product: putative TrbJ-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKKWIANIAIATSVFGASSAHAALPVTDWVGLIQTTMTAMQSLKTEVYENTNIAYQYKMMANQLLQSTGLDAASLTEQLD
AIKDDIGKYEVYGTTLKDLYGTVSDNADYLKKIQSMVVASGKTKEQWFQDQRQLLSNGDKTAKNLFSLGEQIFKNTQSVA
QRRQKIQAQVKLSPTAQAAAQSTNQMLDVLASQNSDLLQLMSVRAQADADKDQQSVARETQSAEAMRAITTAQDEELRQL
RARVFSRKLQAD

Sequences:

>Translated_252_residues
MKKWIANIAIATSVFGASSAHAALPVTDWVGLIQTTMTAMQSLKTEVYENTNIAYQYKMMANQLLQSTGLDAASLTEQLD
AIKDDIGKYEVYGTTLKDLYGTVSDNADYLKKIQSMVVASGKTKEQWFQDQRQLLSNGDKTAKNLFSLGEQIFKNTQSVA
QRRQKIQAQVKLSPTAQAAAQSTNQMLDVLASQNSDLLQLMSVRAQADADKDQQSVARETQSAEAMRAITTAQDEELRQL
RARVFSRKLQAD
>Mature_252_residues
MKKWIANIAIATSVFGASSAHAALPVTDWVGLIQTTMTAMQSLKTEVYENTNIAYQYKMMANQLLQSTGLDAASLTEQLD
AIKDDIGKYEVYGTTLKDLYGTVSDNADYLKKIQSMVVASGKTKEQWFQDQRQLLSNGDKTAKNLFSLGEQIFKNTQSVA
QRRQKIQAQVKLSPTAQAAAQSTNQMLDVLASQNSDLLQLMSVRAQADADKDQQSVARETQSAEAMRAITTAQDEELRQL
RARVFSRKLQAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27912; Mature: 27912

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA