| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
Click here to switch to the map view.
The map label for this gene is pvuIIM [H]
Identifier: 38637986
GI number: 38637986
Start: 339567
End: 340808
Strand: Direct
Name: pvuIIM [H]
Synonym: PHG325
Alternate gene names: 38637986
Gene position: 339567-340808 (Clockwise)
Preceding gene: 38637985
Following gene: 38637987
Centisome position: 75.1
GC content: 64.01
Gene sequence:
>1242_bases ATGCGCCAACTAGACCTGTTCGCACACGTCGCCGCGGCGTTTGCAGACGCGTCCGAAGATGGGCTCTCCACCGGCGCTCT CTACGATATTGTGGCGCGTTCGGCGGGCATCGATCACAGCGCGGCCACGGCGCGCGTTCCGATCGGGACTGCAAAGGCAC TGCATAGCCCATTCAAGCGTGCGGTTCGCTGGCACCAGCAGACGCTCAAGACGCTCGGTGTTGTCGAGCGTGTCGCCGAT CGCACGGGATTCTGGCGCCTCACGCAGCCGGTCACCAAGGACCTCGACCGTGCAGCTGACGGCGTCAAGCTGGTCGCGTT CAGCACGATGCTCGGCATGGCCATCTGGGCTCGAAATGAGGATGTGTTTCGAGGATTGGCGGAACCCATCGCCTTGTGCG TCACGTCGCCGCCATACCCACTGCGGCAAGCCAGGGCATATGGCAATCCTACGGATAACCAGTATGTCGACTTCATCTGC GGGGCGCTCGAGCCGATCGTTGCCAATCTCGTGACCGGCGGCAGCATCGTCCTGAACATTTCCAACGACATCTTCCAGCA CCGCAGTCCCGCCCGATCCCTCTATATGGAGCGGCTTGTGCTGGCCCTTCATGACCGACTCGGCTTGGCGCTGATGGACC GCATTCCATGGGTGAACTACAGCAAGCCGCCGGGCCCGACTCGATGGGCATGCGTGGACCGTGTCCACCTCGCAACGGCA TACGAGCCATTACTATGGCTGACGAACGATCCAGGCCGTGTCCGTGCCGACAACCGCCGCGTGCTGCAGGCCCATACCGA ACGGCATCGGCGGCTGCTCGAAGCCGGTGGCGAACAGCGGTCAGCCAGTTACGGTGATGGTGCCTATCGGATCCGACCCC AGTCCTTTGGCAATCCGACATCCGGCCGGCTTTCCCGCAATGTCGTCGAACGCGGCCACCGCTGCGCCGACACCCTGGCC TACCGCAGGGCGGCCGCGACGCTTGGATTGCCCGCGCAAGGCGCCATGCAGCCTACCGCCATCCCGGACTTCTTTACAAG ATTCCTGACCGAGCCTGGCGACCTGGTCGTCGATCCGTTCGGCGGCACGATCCGTACGGGCCTCGCCGCCGAGCGATTGG GCAGGCGCTGGATCGTCACGGAATGGATCCTCCAGTATGCTCGCGGCGCCGCCGAGCTGTTTCGTCAGTCCGACGGCTTC CTGATGCACCCCGCCCTCCAATGGGCTTCCCAAGGTCGATAG
Upstream 100 bases:
>100_bases CAGGCCGGCAACTCGACGGGATGCTGCATGACGCTTTCCCTGTGACCTCGTTGGACGTGGCGGAGGCCTGCCACCGCGCC CTGGGTCGTGGAGCAGTCTG
Downstream 100 bases:
>100_bases CAATGCAGCACCACGACAACGAAGACAGAGAATTTCCCGAGCCCGAGACCGTCCTTGCCATTCGGGGGGCAATCGCCACC GGCCGGATGGGCGGCCCGAT
Product: putative DNA methyltransferase
Products: NA
Alternate protein names: M.PvuII; N-4 cytosine-specific methyltransferase PvuII [H]
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MRQLDLFAHVAAAFADASEDGLSTGALYDIVARSAGIDHSAATARVPIGTAKALHSPFKRAVRWHQQTLKTLGVVERVAD RTGFWRLTQPVTKDLDRAADGVKLVAFSTMLGMAIWARNEDVFRGLAEPIALCVTSPPYPLRQARAYGNPTDNQYVDFIC GALEPIVANLVTGGSIVLNISNDIFQHRSPARSLYMERLVLALHDRLGLALMDRIPWVNYSKPPGPTRWACVDRVHLATA YEPLLWLTNDPGRVRADNRRVLQAHTERHRRLLEAGGEQRSASYGDGAYRIRPQSFGNPTSGRLSRNVVERGHRCADTLA YRRAAATLGLPAQGAMQPTAIPDFFTRFLTEPGDLVVDPFGGTIRTGLAAERLGRRWIVTEWILQYARGAAELFRQSDGF LMHPALQWASQGR
Sequences:
>Translated_413_residues MRQLDLFAHVAAAFADASEDGLSTGALYDIVARSAGIDHSAATARVPIGTAKALHSPFKRAVRWHQQTLKTLGVVERVAD RTGFWRLTQPVTKDLDRAADGVKLVAFSTMLGMAIWARNEDVFRGLAEPIALCVTSPPYPLRQARAYGNPTDNQYVDFIC GALEPIVANLVTGGSIVLNISNDIFQHRSPARSLYMERLVLALHDRLGLALMDRIPWVNYSKPPGPTRWACVDRVHLATA YEPLLWLTNDPGRVRADNRRVLQAHTERHRRLLEAGGEQRSASYGDGAYRIRPQSFGNPTSGRLSRNVVERGHRCADTLA YRRAAATLGLPAQGAMQPTAIPDFFTRFLTEPGDLVVDPFGGTIRTGLAAERLGRRWIVTEWILQYARGAAELFRQSDGF LMHPALQWASQGR >Mature_413_residues MRQLDLFAHVAAAFADASEDGLSTGALYDIVARSAGIDHSAATARVPIGTAKALHSPFKRAVRWHQQTLKTLGVVERVAD RTGFWRLTQPVTKDLDRAADGVKLVAFSTMLGMAIWARNEDVFRGLAEPIALCVTSPPYPLRQARAYGNPTDNQYVDFIC GALEPIVANLVTGGSIVLNISNDIFQHRSPARSLYMERLVLALHDRLGLALMDRIPWVNYSKPPGPTRWACVDRVHLATA YEPLLWLTNDPGRVRADNRRVLQAHTERHRRLLEAGGEQRSASYGDGAYRIRPQSFGNPTSGRLSRNVVERGHRCADTLA YRRAAATLGLPAQGAMQPTAIPDFFTRFLTEPGDLVVDPFGGTIRTGLAAERLGRRWIVTEWILQYARGAAELFRQSDGF LMHPALQWASQGR
Specific function: This methylase recognizes the double-stranded sequence CAGCTG, causes specific methylation on C-4 on both strands, and protects the DNA from cleavage by the PvuII endonuclease [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR017985 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.113 [H]
Molecular weight: Translated: 45698; Mature: 45698
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQLDLFAHVAAAFADASEDGLSTGALYDIVARSAGIDHSAATARVPIGTAKALHSPFKR CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH AVRWHQQTLKTLGVVERVADRTGFWRLTQPVTKDLDRAADGVKLVAFSTMLGMAIWARNE HHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH DVFRGLAEPIALCVTSPPYPLRQARAYGNPTDNQYVDFICGALEPIVANLVTGGSIVLNI HHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE SNDIFQHRSPARSLYMERLVLALHDRLGLALMDRIPWVNYSKPPGPTRWACVDRVHLATA CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH YEPLLWLTNDPGRVRADNRRVLQAHTERHRRLLEAGGEQRSASYGDGAYRIRPQSFGNPT HCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC SGRLSRNVVERGHRCADTLAYRRAAATLGLPAQGAMQPTAIPDFFTRFLTEPGDLVVDPF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECC GGTIRTGLAAERLGRRWIVTEWILQYARGAAELFRQSDGFLMHPALQWASQGR CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHCCCC >Mature Secondary Structure MRQLDLFAHVAAAFADASEDGLSTGALYDIVARSAGIDHSAATARVPIGTAKALHSPFKR CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH AVRWHQQTLKTLGVVERVADRTGFWRLTQPVTKDLDRAADGVKLVAFSTMLGMAIWARNE HHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH DVFRGLAEPIALCVTSPPYPLRQARAYGNPTDNQYVDFICGALEPIVANLVTGGSIVLNI HHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE SNDIFQHRSPARSLYMERLVLALHDRLGLALMDRIPWVNYSKPPGPTRWACVDRVHLATA CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH YEPLLWLTNDPGRVRADNRRVLQAHTERHRRLLEAGGEQRSASYGDGAYRIRPQSFGNPT HCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC SGRLSRNVVERGHRCADTLAYRRAAATLGLPAQGAMQPTAIPDFFTRFLTEPGDLVVDPF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECC GGTIRTGLAAERLGRRWIVTEWILQYARGAAELFRQSDGFLMHPALQWASQGR CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2662138; 7607491; 9207015 [H]