| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
Click here to switch to the map view.
The map label for this gene is 38637942
Identifier: 38637942
GI number: 38637942
Start: 301471
End: 301983
Strand: Direct
Name: 38637942
Synonym: PHG281
Alternate gene names: NA
Gene position: 301471-301983 (Clockwise)
Preceding gene: 38637936
Following gene: 38637943
Centisome position: 66.67
GC content: 66.67
Gene sequence:
>513_bases GTGCGCACGCTCGAGGACCCTACGTCAACGCGCTTTGCCGACCACGACACGCTGCGATGTGCGCGTGGCGAAATAGCCGA TGAGGTCGAACCGGCCGCCCGGCGTGTGTTCGGCGCTCAGGGCAGCGCATGGCTCGCGCCCATTTGGCGAACCCTGGCGC GCGCGGCAGAACACCTGCCGTTGTGCCGGGACGAGGACGAGACCCATGCTGCGCCGCTGTGGCTCAAGGCCGGAGACTGG GTCGCGACCCAGGACGCTGTCGCGCGCATCGAATCGCGGCGCCGGATTCCTCCTGCGCTCAGCTGGATGGCCGAGGCACA ATATCACCAGCAGGGACTGGAAGCCGTCTGGCCGCTGTTGTCCGAACTCGCATGGCTGTCGCCGCGCCGCCTTGATGCGC TGATCCGGCGCTTGGTGGATCCTTTGCTGAGGACGTTGCGCAAGACCTTCGACGCCCGTTTCGATGGCGACGGGACGATC GAGGATCTGATTTGGTTCCCGGCGGGGTGTTGA
Upstream 100 bases:
>100_bases AGCTGGGGTATTCCGATCCAACCCAAATGCTGCACGTTCGGAAGGTACTCAGGGGCATCGCCGCGGTCCGTCCCGACGCG GCGTTACGAGCCCTAGACTA
Downstream 100 bases:
>100_bases TCGAAAAGCCGGGCCTAGCCAGCCTGCTGGGCAGGACGCAGCCGTCAACTCACCGCCCGCCAGAGCGGGTCATGCGCCTG GTGCTGGAACTGCTGAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRTLEDPTSTRFADHDTLRCARGEIADEVEPAARRVFGAQGSAWLAPIWRTLARAAEHLPLCRDEDETHAAPLWLKAGDW VATQDAVARIESRRRIPPALSWMAEAQYHQQGLEAVWPLLSELAWLSPRRLDALIRRLVDPLLRTLRKTFDARFDGDGTI EDLIWFPAGC
Sequences:
>Translated_170_residues MRTLEDPTSTRFADHDTLRCARGEIADEVEPAARRVFGAQGSAWLAPIWRTLARAAEHLPLCRDEDETHAAPLWLKAGDW VATQDAVARIESRRRIPPALSWMAEAQYHQQGLEAVWPLLSELAWLSPRRLDALIRRLVDPLLRTLRKTFDARFDGDGTI EDLIWFPAGC >Mature_170_residues MRTLEDPTSTRFADHDTLRCARGEIADEVEPAARRVFGAQGSAWLAPIWRTLARAAEHLPLCRDEDETHAAPLWLKAGDW VATQDAVARIESRRRIPPALSWMAEAQYHQQGLEAVWPLLSELAWLSPRRLDALIRRLVDPLLRTLRKTFDARFDGDGTI EDLIWFPAGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19307; Mature: 19307
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLEDPTSTRFADHDTLRCARGEIADEVEPAARRVFGAQGSAWLAPIWRTLARAAEHLP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC LCRDEDETHAAPLWLKAGDWVATQDAVARIESRRRIPPALSWMAEAQYHQQGLEAVWPLL CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SELAWLSPRRLDALIRRLVDPLLRTLRKTFDARFDGDGTIEDLIWFPAGC HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MRTLEDPTSTRFADHDTLRCARGEIADEVEPAARRVFGAQGSAWLAPIWRTLARAAEHLP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC LCRDEDETHAAPLWLKAGDWVATQDAVARIESRRRIPPALSWMAEAQYHQQGLEAVWPLL CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SELAWLSPRRLDALIRRLVDPLLRTLRKTFDARFDGDGTIEDLIWFPAGC HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA