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The map label for this gene is ccmC [H]

Identifier: 38637880

GI number: 38637880

Start: 233157

End: 233957

Strand: Direct

Name: ccmC [H]

Synonym: PHG216

Alternate gene names: 38637880

Gene position: 233157-233957 (Clockwise)

Preceding gene: 38637879

Following gene: 38637881

Centisome position: 51.57

GC content: 69.29

Gene sequence:

>801_bases
ATGAGCCCCCCGCTCAACCCAGCGCATGGCGGCAACGCTGCGCCACCTGCGCTGCGCTCCCGCTGGCTGGCCTACGCCGC
GCCAGTCCGCTTCTATCCGCTGGCGGGACGGCTGGCGCCGTGGTGCTTCGCGGCTGCCGCCATCTTCCTGCTCACTGGGC
TCTACGTCGGCTTTGCCGTCTCGCCCACAGACGCGCAGCAGGGCGAGGTCTATCGCATCATCTTCATCCACGTGCCGGCG
GCGTGGATGTCAATGTTCATCTACCTCGTCATGGCCGGCTACTGCGCGCTGGCGCTGGTGCTGCGCACGCGGCTGTCGTC
GATGATGGCCTCGGCGCTGGCGCCCACGGGCGCTCTCTTCACCGCGCTCGCGCTGTGGACGGGCGCCCTGTGGGGCCAGC
CGACCTGGGGCACATGGTGGGTGTGGGACGCGCGCCTCACGTCGGAGCTGATGCTGCTGTTCCTCTACCTCGGTTTCATC
GCGCTGGAGGCCGCCATCGACGAGCCGCGCCGAGCCGAACGCGCCTGCGCGGTGCTGGCACTGGTGGGCGTGGTCAATAT
CCCCGTCATCTACTTCTCGGTGCAGTGGTGGAACACGCTGCACCAGGGCGCTTCAGTCAGCCTCACCGCGGCGCCGTCGA
TGGCCGCCACCATGCTCGCCGGCATGCTGCTGATGACGCTGGCCTGCTGGATGTACACCATCGCCGTCGCGCTGGTGCGC
GTACGCTGCATCCTGCGCGAGCGCGGCGAGGTGTCCGATGCCGGCCACGCGCCGGCGAATCCCCGGGAGACCACAACATG
A

Upstream 100 bases:

>100_bases
TGCCGCAGTTCTCGCTGCTCGGCGCCTGCCTGGCCTTGTCATTGTTCCTGTGCCCGCTGGCCACCGCCGCCGGGCTGCGC
ACCGCCATGGAGTCGTCCGG

Downstream 100 bases:

>100_bases
ACTGGTCCGCACTGTCATCCTTTACTGGCCATGCAGCATATATCGTGGGCGCCTTCGGCATGGCTTTCGCCCTGCTCGCC
ATCGAACTGTTCTTGCTTGC

Product: ABC heme export system

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSPPLNPAHGGNAAPPALRSRWLAYAAPVRFYPLAGRLAPWCFAAAAIFLLTGLYVGFAVSPTDAQQGEVYRIIFIHVPA
AWMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALFTALALWTGALWGQPTWGTWWVWDARLTSELMLLFLYLGFI
ALEAAIDEPRRAERACAVLALVGVVNIPVIYFSVQWWNTLHQGASVSLTAAPSMAATMLAGMLLMTLACWMYTIAVALVR
VRCILRERGEVSDAGHAPANPRETTT

Sequences:

>Translated_266_residues
MSPPLNPAHGGNAAPPALRSRWLAYAAPVRFYPLAGRLAPWCFAAAAIFLLTGLYVGFAVSPTDAQQGEVYRIIFIHVPA
AWMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALFTALALWTGALWGQPTWGTWWVWDARLTSELMLLFLYLGFI
ALEAAIDEPRRAERACAVLALVGVVNIPVIYFSVQWWNTLHQGASVSLTAAPSMAATMLAGMLLMTLACWMYTIAVALVR
VRCILRERGEVSDAGHAPANPRETTT
>Mature_265_residues
SPPLNPAHGGNAAPPALRSRWLAYAAPVRFYPLAGRLAPWCFAAAAIFLLTGLYVGFAVSPTDAQQGEVYRIIFIHVPAA
WMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALFTALALWTGALWGQPTWGTWWVWDARLTSELMLLFLYLGFIA
LEAAIDEPRRAERACAVLALVGVVNIPVIYFSVQWWNTLHQGASVSLTAAPSMAATMLAGMLLMTLACWMYTIAVALVRV
RCILRERGEVSDAGHAPANPRETTT

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=205, Percent_Identity=49.2682926829268, Blast_Score=194, Evalue=7e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 28936; Mature: 28805

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPLNPAHGGNAAPPALRSRWLAYAAPVRFYPLAGRLAPWCFAAAAIFLLTGLYVGFAV
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
SPTDAQQGEVYRIIFIHVPAAWMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALF
CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TALALWTGALWGQPTWGTWWVWDARLTSELMLLFLYLGFIALEAAIDEPRRAERACAVLA
HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LVGVVNIPVIYFSVQWWNTLHQGASVSLTAAPSMAATMLAGMLLMTLACWMYTIAVALVR
HHHHHHHHHHEEEHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRCILRERGEVSDAGHAPANPRETTT
HHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPPLNPAHGGNAAPPALRSRWLAYAAPVRFYPLAGRLAPWCFAAAAIFLLTGLYVGFAV
CCCCCCCCCCCCCCHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
SPTDAQQGEVYRIIFIHVPAAWMSMFIYLVMAGYCALALVLRTRLSSMMASALAPTGALF
CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TALALWTGALWGQPTWGTWWVWDARLTSELMLLFLYLGFIALEAAIDEPRRAERACAVLA
HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LVGVVNIPVIYFSVQWWNTLHQGASVSLTAAPSMAATMLAGMLLMTLACWMYTIAVALVR
HHHHHHHHHHEEEHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRCILRERGEVSDAGHAPANPRETTT
HHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]