| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637856
Identifier: 38637856
GI number: 38637856
Start: 214377
End: 214877
Strand: Direct
Name: 38637856
Synonym: PHG192
Alternate gene names: NA
Gene position: 214377-214877 (Clockwise)
Preceding gene: 38637855
Following gene: 38637857
Centisome position: 47.41
GC content: 59.48
Gene sequence:
>501_bases ATGTCCTATTGCCCCTTCTTCCAGACCCTGCATGACGAAACTCGCCCTGTGGGCAACCTCGGCCGGGGAACACACTACTC CATCCTGCGGGCGCCGGTCTGGCATGACGAGCTTCTGAACCGGCTCGATCGCTGTGCATTCCTTGACCTCGCGGTCATCT GGGACGAGGACCATGACGATCGCGTGATCGACGCGCTCATGATGCTCTACGTCGGCGGCCTGCTCTCCCCTGTGCGGTAT ATCGGGGAGCGCAAGGGTACGCTCTCTGTGTTGTTGGCTCCAGATGCAATGCGGACCTGGACCCCGAAGGCGCTGCAGCA GTATCGCGACGATATCGAGAATGTTTGCCAGTGCCTGGAAGATCCGTGGACGGCAAAAGTTGACGCCATCGATGGGCGCG AGCACTCGATCATCCACAGTTCGGCCGAGAACGTCTCCATATATCTGCGCAACATCGACGTGCTGTGGGAACTGGGGGTC AAACCAAAGACGCGATCGTAG
Upstream 100 bases:
>100_bases ATGAATGCCTCCGGCGTGATACTGTTTGCATTGATGCTCGCAGCCACGAAATGGCTGCGGTTCCGCGGCGGAAGCCGTCT CTCTCCCGAAAGGAGCGTTC
Downstream 100 bases:
>100_bases TCCCGCGCCTTAGTGCGCAACACGCAACACCGCAGTCGTCAGACTCCCGGCCTGGCGTGTCCTTCCGTTGCGCCTCCACA CAAAACTCAACGCAACGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSYCPFFQTLHDETRPVGNLGRGTHYSILRAPVWHDELLNRLDRCAFLDLAVIWDEDHDDRVIDALMMLYVGGLLSPVRY IGERKGTLSVLLAPDAMRTWTPKALQQYRDDIENVCQCLEDPWTAKVDAIDGREHSIIHSSAENVSIYLRNIDVLWELGV KPKTRS
Sequences:
>Translated_166_residues MSYCPFFQTLHDETRPVGNLGRGTHYSILRAPVWHDELLNRLDRCAFLDLAVIWDEDHDDRVIDALMMLYVGGLLSPVRY IGERKGTLSVLLAPDAMRTWTPKALQQYRDDIENVCQCLEDPWTAKVDAIDGREHSIIHSSAENVSIYLRNIDVLWELGV KPKTRS >Mature_165_residues SYCPFFQTLHDETRPVGNLGRGTHYSILRAPVWHDELLNRLDRCAFLDLAVIWDEDHDDRVIDALMMLYVGGLLSPVRYI GERKGTLSVLLAPDAMRTWTPKALQQYRDDIENVCQCLEDPWTAKVDAIDGREHSIIHSSAENVSIYLRNIDVLWELGVK PKTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19066; Mature: 18935
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYCPFFQTLHDETRPVGNLGRGTHYSILRAPVWHDELLNRLDRCAFLDLAVIWDEDHDD CCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCH RVIDALMMLYVGGLLSPVRYIGERKGTLSVLLAPDAMRTWTPKALQQYRDDIENVCQCLE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHC DPWTAKVDAIDGREHSIIHSSAENVSIYLRNIDVLWELGVKPKTRS CCCCCEEECCCCCCCHHHHCCCCCEEEEEECHHHHEECCCCCCCCC >Mature Secondary Structure SYCPFFQTLHDETRPVGNLGRGTHYSILRAPVWHDELLNRLDRCAFLDLAVIWDEDHDD CCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCH RVIDALMMLYVGGLLSPVRYIGERKGTLSVLLAPDAMRTWTPKALQQYRDDIENVCQCLE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHC DPWTAKVDAIDGREHSIIHSSAENVSIYLRNIDVLWELGVKPKTRS CCCCCEEECCCCCCCHHHHCCCCCEEEEEECHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA