| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637816
Identifier: 38637816
GI number: 38637816
Start: 149278
End: 150600
Strand: Direct
Name: 38637816
Synonym: PHG152
Alternate gene names: NA
Gene position: 149278-150600 (Clockwise)
Preceding gene: 38637815
Following gene: 38637817
Centisome position: 33.01
GC content: 65.91
Gene sequence:
>1323_bases ATGCGTCACGGGCAATCCAAGCCGATCTTGTTGCTCACCCACACCAACGCGGGCGTGGCCGCGCTGCGCAAACGTCTTGA GCATGCTCGGGTGGACCCGAGCCGATACCGGCTCGGGACTGTGGATGGCTGGGCGATGAAGCTGGTCGCGACGTTCCCGG CGCGCGCGGGCATCGACCCGGCGCTCCTTGCCGCCCTACGGCCCGACTACAACGCCATCCGCGAGGCCGCGGCACGGCTG CTGGCGGGAGGTCACGTGGGCGACGTGCTGGCGTCGAGCTACGCGCGCCTCTGGGTCGATGAATACCAGGATTGCTCGGT CCGCCAGCACGCCATTATTCAGGCGGCTTCGGCATTTCTGCCAACCTGTGTTGTCGGGGATCCGTTGCAGGCAATCTTCG GTTTCGGCGGCGATCCGCTGGCATCGTGGCAGGACGACGTGTGTCGACATTTCCCGAGGCTCTTCACGCTCGATCGACCT TGGCGCTGGATCAATGCCGGTGCAGAGGTCCTCGGTCAGTGGCTTTTGCAGGCGCGCCAGGTCTTGCTGAATCGGCAGCC GATCAACTTGGCGAGCGCGCCCCCCGCCGTGCAATGGGTGCAGCTCGATGGTTCGGCTGGGGATCACGCTCGCCTTCTCC AGGCAGCTGGCACCGCGGCGCCGCATCGGGACGGCACGGTACTCGTTATCGGCGACAGTACCAGTCCTCAGAGCCAGCAA CGGATGGCAAGTCTTGTGCCGGGAGCCGTCACGGTCGAAGCCGTGGACTTGCGCGACTTGGTTGACTTCGCGACCGGTTT GCAGCTGGCAGCTCCGGAGGCGCTCAGGCGCGTCGTCGAATTCTGCGGCCGGCTGATGACCGGGGTCGGCGTTGCCGCAC TGCTGGAGCGAGTGGAAATCCTGCGGCGCGGCACAGCACGGCGAGAACCGAGCCTGGCCGAAGCCGCCGCGCTAGCGTTC GAAGCCGAACGCTCGCTACCCGCCGTCAAGCGGCTCATTGAGGCAGTTCGCCAGCAGCCGGGGACACGAGTCTTTCGCCC TATTGTGCTGCGCGCCTGCTTGACTGCGCTCGACACCTCTAGTACAGGCGGCACGACGCTGCAGGAAGCCGCGATTCGGA TTCGCGAGCAGGGCCGCATGCAAGCGAGAGCGCTGCCACGGCGGGCGGTGGGTAGCACGCTGTTGCTAAAAGGACTGGAG GCACACGTCGCGGTCGTTCTCGCTGCGGACACCTTGAACGCGTCAAACCTTTATGTCGCCCTGACGCGGGGCTCGACCCA ACTGGTGGTGTGCTCACGCACTCCGCAACTGCTGGGACGTTGA
Upstream 100 bases:
>100_bases CACCATGGCTAATTATGACCTTGACCTTCTTGAACTAGCCGGCGCGCGGGTAGAAGCGCCGGCCGGTTGCGGCAAGACGC AGATGCTGACGAATGCCCTA
Downstream 100 bases:
>100_bases CCTCTCGGGAAAGGACGTGGCGGCCGTAGAATCGCGGATTCCTTTGCCTGCAATGCCAATAAAAAAGCCCTGCAACAGCA GGGTTTTTTTATTGAGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MRHGQSKPILLLTHTNAGVAALRKRLEHARVDPSRYRLGTVDGWAMKLVATFPARAGIDPALLAALRPDYNAIREAAARL LAGGHVGDVLASSYARLWVDEYQDCSVRQHAIIQAASAFLPTCVVGDPLQAIFGFGGDPLASWQDDVCRHFPRLFTLDRP WRWINAGAEVLGQWLLQARQVLLNRQPINLASAPPAVQWVQLDGSAGDHARLLQAAGTAAPHRDGTVLVIGDSTSPQSQQ RMASLVPGAVTVEAVDLRDLVDFATGLQLAAPEALRRVVEFCGRLMTGVGVAALLERVEILRRGTARREPSLAEAAALAF EAERSLPAVKRLIEAVRQQPGTRVFRPIVLRACLTALDTSSTGGTTLQEAAIRIREQGRMQARALPRRAVGSTLLLKGLE AHVAVVLAADTLNASNLYVALTRGSTQLVVCSRTPQLLGR
Sequences:
>Translated_440_residues MRHGQSKPILLLTHTNAGVAALRKRLEHARVDPSRYRLGTVDGWAMKLVATFPARAGIDPALLAALRPDYNAIREAAARL LAGGHVGDVLASSYARLWVDEYQDCSVRQHAIIQAASAFLPTCVVGDPLQAIFGFGGDPLASWQDDVCRHFPRLFTLDRP WRWINAGAEVLGQWLLQARQVLLNRQPINLASAPPAVQWVQLDGSAGDHARLLQAAGTAAPHRDGTVLVIGDSTSPQSQQ RMASLVPGAVTVEAVDLRDLVDFATGLQLAAPEALRRVVEFCGRLMTGVGVAALLERVEILRRGTARREPSLAEAAALAF EAERSLPAVKRLIEAVRQQPGTRVFRPIVLRACLTALDTSSTGGTTLQEAAIRIREQGRMQARALPRRAVGSTLLLKGLE AHVAVVLAADTLNASNLYVALTRGSTQLVVCSRTPQLLGR >Mature_440_residues MRHGQSKPILLLTHTNAGVAALRKRLEHARVDPSRYRLGTVDGWAMKLVATFPARAGIDPALLAALRPDYNAIREAAARL LAGGHVGDVLASSYARLWVDEYQDCSVRQHAIIQAASAFLPTCVVGDPLQAIFGFGGDPLASWQDDVCRHFPRLFTLDRP WRWINAGAEVLGQWLLQARQVLLNRQPINLASAPPAVQWVQLDGSAGDHARLLQAAGTAAPHRDGTVLVIGDSTSPQSQQ RMASLVPGAVTVEAVDLRDLVDFATGLQLAAPEALRRVVEFCGRLMTGVGVAALLERVEILRRGTARREPSLAEAAALAF EAERSLPAVKRLIEAVRQQPGTRVFRPIVLRACLTALDTSSTGGTTLQEAAIRIREQGRMQARALPRRAVGSTLLLKGLE AHVAVVLAADTLNASNLYVALTRGSTQLVVCSRTPQLLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47435; Mature: 47435
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHGQSKPILLLTHTNAGVAALRKRLEHARVDPSRYRLGTVDGWAMKLVATFPARAGIDP CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHCCCCCCCCH ALLAALRPDYNAIREAAARLLAGGHVGDVLASSYARLWVDEYQDCSVRQHAIIQAASAFL HHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC PTCVVGDPLQAIFGFGGDPLASWQDDVCRHFPRLFTLDRPWRWINAGAEVLGQWLLQARQ CHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH VLLNRQPINLASAPPAVQWVQLDGSAGDHARLLQAAGTAAPHRDGTVLVIGDSTSPQSQQ HHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHH RMASLVPGAVTVEAVDLRDLVDFATGLQLAAPEALRRVVEFCGRLMTGVGVAALLERVEI HHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRGTARREPSLAEAAALAFEAERSLPAVKRLIEAVRQQPGTRVFRPIVLRACLTALDTS HHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC STGGTTLQEAAIRIREQGRMQARALPRRAVGSTLLLKGLEAHVAVVLAADTLNASNLYVA CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEE LTRGSTQLVVCSRTPQLLGR EECCCEEEEEEECCHHHHCC >Mature Secondary Structure MRHGQSKPILLLTHTNAGVAALRKRLEHARVDPSRYRLGTVDGWAMKLVATFPARAGIDP CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHCCCCCCCCH ALLAALRPDYNAIREAAARLLAGGHVGDVLASSYARLWVDEYQDCSVRQHAIIQAASAFL HHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC PTCVVGDPLQAIFGFGGDPLASWQDDVCRHFPRLFTLDRPWRWINAGAEVLGQWLLQARQ CHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH VLLNRQPINLASAPPAVQWVQLDGSAGDHARLLQAAGTAAPHRDGTVLVIGDSTSPQSQQ HHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHH RMASLVPGAVTVEAVDLRDLVDFATGLQLAAPEALRRVVEFCGRLMTGVGVAALLERVEI HHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRGTARREPSLAEAAALAFEAERSLPAVKRLIEAVRQQPGTRVFRPIVLRACLTALDTS HHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC STGGTTLQEAAIRIREQGRMQARALPRRAVGSTLLLKGLEAHVAVVLAADTLNASNLYVA CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEE LTRGSTQLVVCSRTPQLLGR EECCCEEEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA