| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637769
Identifier: 38637769
GI number: 38637769
Start: 97479
End: 98792
Strand: Direct
Name: 38637769
Synonym: PHG104
Alternate gene names: NA
Gene position: 97479-98792 (Clockwise)
Preceding gene: 38637768
Following gene: 38637770
Centisome position: 21.56
GC content: 63.85
Gene sequence:
>1314_bases GTGGAGCCCGATGGCTGCACGCCGCTTCCGATCGACGAAATCAAGCGCCTGGCGTCCGTGCTCGGTGAGGCCGCGCCGCT TGTCGAAGACGTTTTCTCGCCTTCCATACGGTTCATCGATGTCGGCCGTTATGGCCCGCCTCCCGATAGTCGCGAGCGAC GTGCCATCCGCTATTGCGAGACCTGTATGCAGCACGGCTACCACAGCTACCTGCATCAGCTTGGGTGGCTTTCGCGGTGC CCATTTCACCTGAGCGAGCTGAAAACGACCTGGGCGCAGAAGCACACCGCCAGCTTCGTGTCGCAGCGTGTGGGCGCGTT GGAGTTCGTGATGCGGCAACGCTGCAGGACATGGCCGCACGGCATTGATGCCGGCTTTCCCGCCCGAGAGCAGGGGCGTG TTGCGTCGCTCGCCGGCTGGGTCGCACGGGCGAGCGTCGCTGCCGCGCGCATGTCGCTCGGCGAGATCTGGTCGTCGGGC AACGATGGCATGCCGGGGGCTGTCTCCCTCGACCAAGCGTTCGCTCAGCTGCGCACGCTTGAGCCCCCGCCCGAGGACAT CGAGCAGCTCCTTATCGAAGCCGGTGATCGGTGGACTCTGGAAAGCCACGTGTTTGCGCGGCAAGCGAAAATCCAACTCG GCCACCTCAGGTTGTGCCACCTCAGCTTTGCCGACGTTCTTCACTTCTATATACGCATCAACGCCGCTTCGGCGAATCCG TCTTCGTTTGTCACGCGCCTGAATGCCATCCAGGACCGGCAGGCTCGCCATGGCACCTGTCGCTGTCGGTGGAGGCTGAC CAAGGAGGGACGGCTCTCGCGCTGGGTCAGCGTGCGTCCAGAGGAGGGGCCCCGCTGGGGCCTGATCTGTCCATACGATA TCGCGCTCAACGAACTTCAACTCGGCTGGGGCCGTTCGGACCTGGCGCTCTCCAATCGGCCGGCGGAGCAGGAACGGCGG CGCTTTTGCAGCGTTTCTCACGCGATGCGCGACTTGGGCCTCATCCGGTATACGCGGGATGCAGCGGTAGCGCCGGCGGG CTATCTATATGCCGATCAGGACGTCTGGACCTGCTGCGAGTGGGTTCGGGAGTCGCCGCTAACCGCAGTGCTCGATATGG CGGTCGCGTGGGAAACCGAGCTGACGTTCGACGCGTTGACCACTTGGCTAGATGACATCGATCGGGGTGTCGCTCCGCTT GAGCGCGACGATTCCAAGTCTTGCGTCCGCCTGCGCGAAACCGACGATGGCCTCTTGCTGATCAAGTGGACGAGGGCAGA AGCGAATGTGCGTCGGGGGCTATCCCGGATCTGA
Upstream 100 bases:
>100_bases GCCGGGAAACCTCCGTCCGTACGAGTCGAGGCTGTCGTTCGTCGCCCGCTTCTGCGCACTGAATGGCATCAACGTCCGAA AATGCGCGGAGTTTTTGAGG
Downstream 100 bases:
>100_bases ACACGACGTACCGTGAGCAACGTGAAGCCGTTGGCTTGCGGCGCGCCAGAGTTTCGGCCCAGGGGGCTCGGAACAAAATT GTGCAGACAACGGTAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MEPDGCTPLPIDEIKRLASVLGEAAPLVEDVFSPSIRFIDVGRYGPPPDSRERRAIRYCETCMQHGYHSYLHQLGWLSRC PFHLSELKTTWAQKHTASFVSQRVGALEFVMRQRCRTWPHGIDAGFPAREQGRVASLAGWVARASVAAARMSLGEIWSSG NDGMPGAVSLDQAFAQLRTLEPPPEDIEQLLIEAGDRWTLESHVFARQAKIQLGHLRLCHLSFADVLHFYIRINAASANP SSFVTRLNAIQDRQARHGTCRCRWRLTKEGRLSRWVSVRPEEGPRWGLICPYDIALNELQLGWGRSDLALSNRPAEQERR RFCSVSHAMRDLGLIRYTRDAAVAPAGYLYADQDVWTCCEWVRESPLTAVLDMAVAWETELTFDALTTWLDDIDRGVAPL ERDDSKSCVRLRETDDGLLLIKWTRAEANVRRGLSRI
Sequences:
>Translated_437_residues MEPDGCTPLPIDEIKRLASVLGEAAPLVEDVFSPSIRFIDVGRYGPPPDSRERRAIRYCETCMQHGYHSYLHQLGWLSRC PFHLSELKTTWAQKHTASFVSQRVGALEFVMRQRCRTWPHGIDAGFPAREQGRVASLAGWVARASVAAARMSLGEIWSSG NDGMPGAVSLDQAFAQLRTLEPPPEDIEQLLIEAGDRWTLESHVFARQAKIQLGHLRLCHLSFADVLHFYIRINAASANP SSFVTRLNAIQDRQARHGTCRCRWRLTKEGRLSRWVSVRPEEGPRWGLICPYDIALNELQLGWGRSDLALSNRPAEQERR RFCSVSHAMRDLGLIRYTRDAAVAPAGYLYADQDVWTCCEWVRESPLTAVLDMAVAWETELTFDALTTWLDDIDRGVAPL ERDDSKSCVRLRETDDGLLLIKWTRAEANVRRGLSRI >Mature_437_residues MEPDGCTPLPIDEIKRLASVLGEAAPLVEDVFSPSIRFIDVGRYGPPPDSRERRAIRYCETCMQHGYHSYLHQLGWLSRC PFHLSELKTTWAQKHTASFVSQRVGALEFVMRQRCRTWPHGIDAGFPAREQGRVASLAGWVARASVAAARMSLGEIWSSG NDGMPGAVSLDQAFAQLRTLEPPPEDIEQLLIEAGDRWTLESHVFARQAKIQLGHLRLCHLSFADVLHFYIRINAASANP SSFVTRLNAIQDRQARHGTCRCRWRLTKEGRLSRWVSVRPEEGPRWGLICPYDIALNELQLGWGRSDLALSNRPAEQERR RFCSVSHAMRDLGLIRYTRDAAVAPAGYLYADQDVWTCCEWVRESPLTAVLDMAVAWETELTFDALTTWLDDIDRGVAPL ERDDSKSCVRLRETDDGLLLIKWTRAEANVRRGLSRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49491; Mature: 49491
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPDGCTPLPIDEIKRLASVLGEAAPLVEDVFSPSIRFIDVGRYGPPPDSRERRAIRYCE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH TCMQHGYHSYLHQLGWLSRCPFHLSELKTTWAQKHTASFVSQRVGALEFVMRQRCRTWPH HHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GIDAGFPAREQGRVASLAGWVARASVAAARMSLGEIWSSGNDGMPGAVSLDQAFAQLRTL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC EPPPEDIEQLLIEAGDRWTLESHVFARQAKIQLGHLRLCHLSFADVLHFYIRINAASANP CCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHEEEECCCCH SSFVTRLNAIQDRQARHGTCRCRWRLTKEGRLSRWVSVRPEEGPRWGLICPYDIALNELQ HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCEECCHHHHHHHHC LGWGRSDLALSNRPAEQERRRFCSVSHAMRDLGLIRYTRDAAVAPAGYLYADQDVWTCCE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEECCHHHHHHH WVRESPLTAVLDMAVAWETELTFDALTTWLDDIDRGVAPLERDDSKSCVRLRETDDGLLL HHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCCEEE IKWTRAEANVRRGLSRI EEEECCHHHHHHHHHCC >Mature Secondary Structure MEPDGCTPLPIDEIKRLASVLGEAAPLVEDVFSPSIRFIDVGRYGPPPDSRERRAIRYCE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH TCMQHGYHSYLHQLGWLSRCPFHLSELKTTWAQKHTASFVSQRVGALEFVMRQRCRTWPH HHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GIDAGFPAREQGRVASLAGWVARASVAAARMSLGEIWSSGNDGMPGAVSLDQAFAQLRTL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC EPPPEDIEQLLIEAGDRWTLESHVFARQAKIQLGHLRLCHLSFADVLHFYIRINAASANP CCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHEEEECCCCH SSFVTRLNAIQDRQARHGTCRCRWRLTKEGRLSRWVSVRPEEGPRWGLICPYDIALNELQ HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCEECCHHHHHHHHC LGWGRSDLALSNRPAEQERRRFCSVSHAMRDLGLIRYTRDAAVAPAGYLYADQDVWTCCE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEECCHHHHHHH WVRESPLTAVLDMAVAWETELTFDALTTWLDDIDRGVAPLERDDSKSCVRLRETDDGLLL HHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCCEEE IKWTRAEANVRRGLSRI EEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA