| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637745
Identifier: 38637745
GI number: 38637745
Start: 75061
End: 75957
Strand: Direct
Name: 38637745
Synonym: PHG080
Alternate gene names: NA
Gene position: 75061-75957 (Clockwise)
Preceding gene: 38637744
Following gene: 38637752
Centisome position: 16.6
GC content: 62.54
Gene sequence:
>897_bases ATGGCATCGACTTCGTCGCGCTGGCCATGGGCATGTTCGGCTTTGCCGAGATCATCGCCAACCTCGAACAGAAAGAACAC CGCGAGACCTTTACCGATCACGTCACCAATCTATGGCCCTCCAAGGCGGACTTCAGGCGCATGGCACCCGCCGCTGCGCG GTACCGCGCTAGGCTCCATTCTGGGCATCCTGCCCGGCGGCGGTGCGGCGCTGGCTTCGTTCGCAGCTTACTCGCTGGAA AAGAAGACCTCGAAGTACTCGCAAGAGTTCGGCAAGGGCGCCATCGAAGGCGTGGCAGGTCCGGAGTCGGCCAATAACGC CGCGGCGCAGACCTCCTTTATCCCGCTGCTGACGCTGGGCATTCCGCCCAACGCCGTGATGGCGCTGATGGTGGGCGCGA TGGCCATCCACAACATCCAGCCCGGCCCGCAGGTGATGACCAGCAACCCCGCGCTATTCTGGGGCCTGATCGCCTCGATG TGGATCGGCAACCTGATGCTGATCATCCTGAACCTGCCGCTGATCGGGATCTGGGTGAAGCTGCTGCAAGTGCCTTACCG CTACCTGTACCCGGCCATCCTGGTGTTCTGCTGCATCGGCGTCTTCTCGGTCAACAACCAGACCTTCGACGTCTTCACCG CGGCTGGCTTCGGTGTGATCGGCTACCTGTTCATCAAGCTCCAGTGCGAGCCGGCACCACTGCTGCTGGGCTTTGTGCTG GGACCGATGATGGAGGAGAACTTCCGCCGGACGCTGTTGCTGTCGCGCGGGACGTTCACTGTGTTCGTGACCGGTCCGCT GTCGCTCAGCCTGCTGATTGCCGCCGCGCTGCTGGTTGGCATCGTTGCCCTGCCATCGATCAAGGCCAAGCGCGAGGAAG CGTTCCAGGAAGAGTAG
Upstream 100 bases:
>100_bases GCGGTGGCAATGATCGTGCTGGGGCTTCTGCTGGGCCTGGTCGGCACCGACGTGAACTCGGGCGCCGCGCGTTTCTCCTT TGATGTCCCTGAACTGACCG
Downstream 100 bases:
>100_bases TGCCCAAGCGCGAAGGACCTGCGCCGGCCTTCGTGCCGGCGTATGCAGCGTGTTTGGCAAGCCGCTGATGAGCCGCTGAA CGACGCGGGGCGAAGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MASTSSRWPWACSALPRSSPTSNRKNTARPLPITSPIYGPPRRTSGAWHPPLRGTALGSILGILPGGGAALASFAAYSLE KKTSKYSQEFGKGAIEGVAGPESANNAAAQTSFIPLLTLGIPPNAVMALMVGAMAIHNIQPGPQVMTSNPALFWGLIASM WIGNLMLIILNLPLIGIWVKLLQVPYRYLYPAILVFCCIGVFSVNNQTFDVFTAAGFGVIGYLFIKLQCEPAPLLLGFVL GPMMEENFRRTLLLSRGTFTVFVTGPLSLSLLIAAALLVGIVALPSIKAKREEAFQEE
Sequences:
>Translated_298_residues MASTSSRWPWACSALPRSSPTSNRKNTARPLPITSPIYGPPRRTSGAWHPPLRGTALGSILGILPGGGAALASFAAYSLE KKTSKYSQEFGKGAIEGVAGPESANNAAAQTSFIPLLTLGIPPNAVMALMVGAMAIHNIQPGPQVMTSNPALFWGLIASM WIGNLMLIILNLPLIGIWVKLLQVPYRYLYPAILVFCCIGVFSVNNQTFDVFTAAGFGVIGYLFIKLQCEPAPLLLGFVL GPMMEENFRRTLLLSRGTFTVFVTGPLSLSLLIAAALLVGIVALPSIKAKREEAFQEE >Mature_297_residues ASTSSRWPWACSALPRSSPTSNRKNTARPLPITSPIYGPPRRTSGAWHPPLRGTALGSILGILPGGGAALASFAAYSLEK KTSKYSQEFGKGAIEGVAGPESANNAAAQTSFIPLLTLGIPPNAVMALMVGAMAIHNIQPGPQVMTSNPALFWGLIASMW IGNLMLIILNLPLIGIWVKLLQVPYRYLYPAILVFCCIGVFSVNNQTFDVFTAAGFGVIGYLFIKLQCEPAPLLLGFVLG PMMEENFRRTLLLSRGTFTVFVTGPLSLSLLIAAALLVGIVALPSIKAKREEAFQEE
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 31831; Mature: 31700
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTSSRWPWACSALPRSSPTSNRKNTARPLPITSPIYGPPRRTSGAWHPPLRGTALGSI CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LGILPGGGAALASFAAYSLEKKTSKYSQEFGKGAIEGVAGPESANNAAAQTSFIPLLTLG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHEEEEEC IPPNAVMALMVGAMAIHNIQPGPQVMTSNPALFWGLIASMWIGNLMLIILNLPLIGIWVK CCHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LLQVPYRYLYPAILVFCCIGVFSVNNQTFDVFTAAGFGVIGYLFIKLQCEPAPLLLGFVL HHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHEEHEEEEECCCHHHHHHHHH GPMMEENFRRTLLLSRGTFTVFVTGPLSLSLLIAAALLVGIVALPSIKAKREEAFQEE HHHHHHHHHHHEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure ASTSSRWPWACSALPRSSPTSNRKNTARPLPITSPIYGPPRRTSGAWHPPLRGTALGSI CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LGILPGGGAALASFAAYSLEKKTSKYSQEFGKGAIEGVAGPESANNAAAQTSFIPLLTLG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHEEEEEC IPPNAVMALMVGAMAIHNIQPGPQVMTSNPALFWGLIASMWIGNLMLIILNLPLIGIWVK CCHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LLQVPYRYLYPAILVFCCIGVFSVNNQTFDVFTAAGFGVIGYLFIKLQCEPAPLLLGFVL HHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHEEHEEEEECCCHHHHHHHHH GPMMEENFRRTLLLSRGTFTVFVTGPLSLSLLIAAALLVGIVALPSIKAKREEAFQEE HHHHHHHHHHHEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]