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The map label for this gene is rdoA [H]

Identifier: 37681419

GI number: 37681419

Start: 3325470

End: 3326456

Strand: Direct

Name: rdoA [H]

Synonym: VV3235

Alternate gene names: 37681419

Gene position: 3325470-3326456 (Clockwise)

Preceding gene: 37681418

Following gene: 37681420

Centisome position: 99.13

GC content: 48.73

Gene sequence:

>987_bases
ATGTCGCTAGGCGCATTCAATTTTGACGCATTAACGCCCGATTTTATGTGGTATGCCCTTGAGAGCATCGGCATTCGCGC
TGAATCAGGCTTATTGCCTCTCAACAGCTATGAAAACCGCGTATACCAGTTTACCGATGAAGAGCGTCGCCGTTTTGTGG
TGAAGTTTTATCGCCCAGAGCGTTGGACGCCGGCACAAATTGTTGAAGAACATCAGTTCACTCAAGAGCTGGTGGAAAAT
GACATTCCTGTCGCCGCTCCGGTCAACATCAACGGTGCTACCCTACATCATTATCAAGGCTACCAATTTGCCTTGTTCAA
CAGCGTCGGTGGCCGTCAATTTGAAGTGGATAATCTCGATCAACTCGAGTGGGTTGGCCGCTTCCTCGGTCGAATTCACC
AAGTGGGTGCAAAACAGAGATTCCAGCACCGACCTAGCATAGGGCTAGATGAGTACCTCTATCAGCCACGCGCACTCCTG
CAACAATGCAACATGATCCCGATGCATTTAGAGAACAGCTTCTTTCAGGATCTCGACCGACTCATCGCCGCCATCGAAGC
GCAGTGGCCAAAAAACACTCAAGCCATCCGCTTGCACGGTGATTGTCATCCCGGCAATATTTTATGGCGTGATGGCCCGA
TGTTTGTTGATTTAGATGACGCGCGTAATGGGCCAGCGGTTCAAGATCTCTGGATGTTGCTCAATGGTGATCGCCAAGAA
AAGCTCATGCAACTCGACATTTTACTGGAGTCATATGGCGAATTTAGTGATTTTTCGCACCAAGAGTTGAAACTGATCGA
GCCTTTGCGTGGTCTACGAATGGTGCATTATATGGCATGGTTAGCAAAACGATGGCAAGACCCTGCGTTCCCACTCGCTT
TTCCTTGGTTTAATGAGCCAAAATACTGGGAAGGTCAGGTATTGGCGTTTAAAGAACAAATCGCCGCATTGGAAGAGCCC
CCTCTTTCATTGATGCCACAATGGTAA

Upstream 100 bases:

>100_bases
CAACGACTTCACCATTGAAGTAGAAAGCCGTTTCATCAAGAAACTGTAACTTCAACCCAATTCATGGACAAAGGCTCAGC
AATGAGCCTTTTTATTTACT

Downstream 100 bases:

>100_bases
CTGCCTCAATAACATAACGGAGAAATAAATAGATGAAGAAACTGTTCGCGTTTTTTTCGATGCTGTTACTCAGCCTGACA
GCCAACGCAGCAACCCAATT

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSLGAFNFDALTPDFMWYALESIGIRAESGLLPLNSYENRVYQFTDEERRRFVVKFYRPERWTPAQIVEEHQFTQELVEN
DIPVAAPVNINGATLHHYQGYQFALFNSVGGRQFEVDNLDQLEWVGRFLGRIHQVGAKQRFQHRPSIGLDEYLYQPRALL
QQCNMIPMHLENSFFQDLDRLIAAIEAQWPKNTQAIRLHGDCHPGNILWRDGPMFVDLDDARNGPAVQDLWMLLNGDRQE
KLMQLDILLESYGEFSDFSHQELKLIEPLRGLRMVHYMAWLAKRWQDPAFPLAFPWFNEPKYWEGQVLAFKEQIAALEEP
PLSLMPQW

Sequences:

>Translated_328_residues
MSLGAFNFDALTPDFMWYALESIGIRAESGLLPLNSYENRVYQFTDEERRRFVVKFYRPERWTPAQIVEEHQFTQELVEN
DIPVAAPVNINGATLHHYQGYQFALFNSVGGRQFEVDNLDQLEWVGRFLGRIHQVGAKQRFQHRPSIGLDEYLYQPRALL
QQCNMIPMHLENSFFQDLDRLIAAIEAQWPKNTQAIRLHGDCHPGNILWRDGPMFVDLDDARNGPAVQDLWMLLNGDRQE
KLMQLDILLESYGEFSDFSHQELKLIEPLRGLRMVHYMAWLAKRWQDPAFPLAFPWFNEPKYWEGQVLAFKEQIAALEEP
PLSLMPQW
>Mature_327_residues
SLGAFNFDALTPDFMWYALESIGIRAESGLLPLNSYENRVYQFTDEERRRFVVKFYRPERWTPAQIVEEHQFTQELVEND
IPVAAPVNINGATLHHYQGYQFALFNSVGGRQFEVDNLDQLEWVGRFLGRIHQVGAKQRFQHRPSIGLDEYLYQPRALLQ
QCNMIPMHLENSFFQDLDRLIAAIEAQWPKNTQAIRLHGDCHPGNILWRDGPMFVDLDDARNGPAVQDLWMLLNGDRQEK
LMQLDILLESYGEFSDFSHQELKLIEPLRGLRMVHYMAWLAKRWQDPAFPLAFPWFNEPKYWEGQVLAFKEQIAALEEPP
LSLMPQW

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=61.5853658536585, Blast_Score=429, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38468; Mature: 38337

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGAFNFDALTPDFMWYALESIGIRAESGLLPLNSYENRVYQFTDEERRRFVVKFYRPE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHEEEEEEECCC
RWTPAQIVEEHQFTQELVENDIPVAAPVNINGATLHHYQGYQFALFNSVGGRQFEVDNLD
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCEEEEEEECCCCCEEECCCCH
QLEWVGRFLGRIHQVGAKQRFQHRPSIGLDEYLYQPRALLQQCNMIPMHLENSFFQDLDR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHH
LIAAIEAQWPKNTQAIRLHGDCHPGNILWRDGPMFVDLDDARNGPAVQDLWMLLNGDRQE
HHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCHHH
KLMQLDILLESYGEFSDFSHQELKLIEPLRGLRMVHYMAWLAKRWQDPAFPLAFPWFNEP
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
KYWEGQVLAFKEQIAALEEPPLSLMPQW
CCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLGAFNFDALTPDFMWYALESIGIRAESGLLPLNSYENRVYQFTDEERRRFVVKFYRPE
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHEEEEEEECCC
RWTPAQIVEEHQFTQELVENDIPVAAPVNINGATLHHYQGYQFALFNSVGGRQFEVDNLD
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCEEEEEEECCCCCEEECCCCH
QLEWVGRFLGRIHQVGAKQRFQHRPSIGLDEYLYQPRALLQQCNMIPMHLENSFFQDLDR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHH
LIAAIEAQWPKNTQAIRLHGDCHPGNILWRDGPMFVDLDDARNGPAVQDLWMLLNGDRQE
HHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCHHH
KLMQLDILLESYGEFSDFSHQELKLIEPLRGLRMVHYMAWLAKRWQDPAFPLAFPWFNEP
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
KYWEGQVLAFKEQIAALEEPPLSLMPQW
CCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]