| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is fixG [H]
Identifier: 37681418
GI number: 37681418
Start: 3323931
End: 3325418
Strand: Direct
Name: fixG [H]
Synonym: VV3234
Alternate gene names: 37681418
Gene position: 3323931-3325418 (Clockwise)
Preceding gene: 37681417
Following gene: 37681419
Centisome position: 99.09
GC content: 49.33
Gene sequence:
>1488_bases GTGAGCAAAGTCAGTGAGCGCAAACCAAGAGAAATTGCGCCATTAAAGCCTAAGAAGGATCAATCCATGAGTCAGGATAA AATCGATATCAAAGATGTGACTCCGAAAACCTTTAACCCCAAGACCCACAAAGGTAAGGGGGATCGGTTTAACCCAAACA ACCGCATTTACGTACGTGAGAGTAAAGGCACATTCCAAAAACTGCGCCGATATGGTGGCTGGTTTTTGCTGCTGCTATTT ACCTTAACTCCATGGATTTCCTACGGCGATCGCCAAGCGATTCTGTTGGATATCGGTAGCCAACAGTTCAACTTCTTCGG CACCACGCTCTACCCACAAGACCTGACCTTGCTGGCCTTGCTGTTTATGATTGCCGCCTTTGGTCTGTTTTTCATCACTA CGTTTTTGGGCCGAGTGTGGTGTGGCTACTTATGCCCACAAACCGTTTGGACCTTTATGTACATCTGGTTTGAAGAGAAA CTCGAGGGCAGCGCCAACAAACGCCGCAAGCAAGATTCCGGCAAACTGACGCCCAATCTCGCCATGCGAAAAAGCGCAAA GCATGTCGCGTGGTTTACCATCGCGCTCGCGACAGGCTTCACCTTCGTCGGTTATTTTGTCCCGGTGCGTGAACTGGTGG TGGATTTCTTTACCTTTAACGCCAGCTTCTGGCCTGTTTTCTGGGTGATGTTCTTTGCCATCTGTACCTACGCCAACGCA GGTTGGATGCGCTCTATCGTTTGTTTGCACATGTGCCCTTACGCGCGCTTCCAATCAGCGATGTTTGATAAAGACACCTT TATCGTCGGTTATGACAGTCAGCGCGGCGAGCAGCGTGGCCCGCGTTCACGCAAAGCCGATCCGAAGCAGCTCGGGTTAG GTGACTGTATTGACTGCGATCTGTGTGTGCAAGTGTGCCCAACGGGGATTGATATTCGTGATGGCCTGCAATACGAGTGT ATTAACTGTGGCGCGTGTATCGATGCCTGTAATACCACCATGGATAAAATGGGCTATGAAAAAGGGCTGATCAACTACAC CACCGAGCATCGTCTGTCTGGGAAACACACCAAAGTCATGCGACCCAAGTTGATCGGTTATGGCTTGGTATTGCTGGTGA TGTTGGGTTTGTTCTTCGCACAAATTGCTGCCGTTGACCCTGCGGGTCTCAGCGTGATTCGCGATCGCAACCAGTTGTTC CGCGTCAACAGCGCCGGTGAAGTGGAAAACACCTACACCCTCAAAATCATCAACAAAACTCAACAAGTGCAAGAATATCA CTTGGATGTTAAGGGGCTCAGTGAGGCAACTTGGTATGGTAAGCAAACCATTCAGGTCAACCCAGGCGAAGTTCTCAACT TACCACTAAGTCTTGGCGTGGATCCCGAGAAGCTCTCCTCTCCAATTAGCACGATTCAGTTTATACTGGACGACAAGAGC AACGACTTCACCATTGAAGTAGAAAGCCGTTTCATCAAGAAACTGTAA
Upstream 100 bases:
>100_bases CCTTAAAGAAATACAAATGTTATTGATTGTATAATCGTCGTCCATCAGTTTTTACTAAAATATTAGCAAAGCCTTATTGT GTATAAACACATCGGCATTT
Downstream 100 bases:
>100_bases CTTCAACCCAATTCATGGACAAAGGCTCAGCAATGAGCCTTTTTATTTACTATGTCGCTAGGCGCATTCAATTTTGACGC ATTAACGCCCGATTTTATGT
Product: FixG-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSKVSERKPREIAPLKPKKDQSMSQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRESKGTFQKLRRYGGWFLLLLF TLTPWISYGDRQAILLDIGSQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEK LEGSANKRRKQDSGKLTPNLAMRKSAKHVAWFTIALATGFTFVGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANA GWMRSIVCLHMCPYARFQSAMFDKDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCDLCVQVCPTGIDIRDGLQYEC INCGACIDACNTTMDKMGYEKGLINYTTEHRLSGKHTKVMRPKLIGYGLVLLVMLGLFFAQIAAVDPAGLSVIRDRNQLF RVNSAGEVENTYTLKIINKTQQVQEYHLDVKGLSEATWYGKQTIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKS NDFTIEVESRFIKKL
Sequences:
>Translated_495_residues MSKVSERKPREIAPLKPKKDQSMSQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRESKGTFQKLRRYGGWFLLLLF TLTPWISYGDRQAILLDIGSQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEK LEGSANKRRKQDSGKLTPNLAMRKSAKHVAWFTIALATGFTFVGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANA GWMRSIVCLHMCPYARFQSAMFDKDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCDLCVQVCPTGIDIRDGLQYEC INCGACIDACNTTMDKMGYEKGLINYTTEHRLSGKHTKVMRPKLIGYGLVLLVMLGLFFAQIAAVDPAGLSVIRDRNQLF RVNSAGEVENTYTLKIINKTQQVQEYHLDVKGLSEATWYGKQTIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKS NDFTIEVESRFIKKL >Mature_494_residues SKVSERKPREIAPLKPKKDQSMSQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRESKGTFQKLRRYGGWFLLLLFT LTPWISYGDRQAILLDIGSQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKL EGSANKRRKQDSGKLTPNLAMRKSAKHVAWFTIALATGFTFVGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANAG WMRSIVCLHMCPYARFQSAMFDKDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCDLCVQVCPTGIDIRDGLQYECI NCGACIDACNTTMDKMGYEKGLINYTTEHRLSGKHTKVMRPKLIGYGLVLLVMLGLFFAQIAAVDPAGLSVIRDRNQLFR VNSAGEVENTYTLKIINKTQQVQEYHLDVKGLSEATWYGKQTIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKSN DFTIEVESRFIKKL
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56478; Mature: 56347
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVSERKPREIAPLKPKKDQSMSQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC SKGTFQKLRRYGGWFLLLLFTLTPWISYGDRQAILLDIGSQQFNFFGTTLYPQDLTLLAL CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECEECCCHHHHHHH LFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDSGKLTPNL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCH AMRKSAKHVAWFTIALATGFTFVGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC GWMRSIVCLHMCPYARFQSAMFDKDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCD HHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCHH LCVQVCPTGIDIRDGLQYECINCGACIDACNTTMDKMGYEKGLINYTTEHRLSGKHTKVM HHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHC RPKLIGYGLVLLVMLGLFFAQIAAVDPAGLSVIRDRNQLFRVNSAGEVENTYTLKIINKT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCCCEEEEEEECHH QQVQEYHLDVKGLSEATWYGKQTIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKS HHHHHHHCCCCCCCHHHCCCCEEEEECCCCEEECCCCCCCCHHHHHCHHHHHHHHCCCCC NDFTIEVESRFIKKL CCEEEEEHHHHHHCC >Mature Secondary Structure SKVSERKPREIAPLKPKKDQSMSQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC SKGTFQKLRRYGGWFLLLLFTLTPWISYGDRQAILLDIGSQQFNFFGTTLYPQDLTLLAL CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECEECCCHHHHHHH LFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDSGKLTPNL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCH AMRKSAKHVAWFTIALATGFTFVGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC GWMRSIVCLHMCPYARFQSAMFDKDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCD HHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCHH LCVQVCPTGIDIRDGLQYECINCGACIDACNTTMDKMGYEKGLINYTTEHRLSGKHTKVM HHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHC RPKLIGYGLVLLVMLGLFFAQIAAVDPAGLSVIRDRNQLFRVNSAGEVENTYTLKIINKT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCCCEEEEEEECHH QQVQEYHLDVKGLSEATWYGKQTIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKS HHHHHHHCCCCCCCHHHCCCCEEEEECCCCEEECCCCCCCCHHHHHCHHHHHHHHCCCCC NDFTIEVESRFIKKL CCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]