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The map label for this gene is yrdA [H]

Identifier: 37681397

GI number: 37681397

Start: 3305370

End: 3306005

Strand: Direct

Name: yrdA [H]

Synonym: VV3213

Alternate gene names: 37681397

Gene position: 3305370-3306005 (Clockwise)

Preceding gene: 37681396

Following gene: 37681402

Centisome position: 98.54

GC content: 43.55

Gene sequence:

>636_bases
GTGTTTTTTATTCTAAAGGGTGAATTTTTGCTACTCTTCTCACACGATATCACCATTCATCAGGCTTTATTAGGAGGAAA
AATGAGTTCGATTAGAAGTTATAAAGGCATTCATCCCCAAATAGGCGAACGCGTCTATATCGATTCAACCTCCGTCATTG
TCGGTGATATTCGAATAGGTGATGATTCGAGTATTTGGCCATTGGTTGCGGCTCGTGGCGATGTCAACCATATCCACATT
GGTGCTCGCACCAACATTCAAGATGGCAGCGTGCTGCATGTGACCCATAAAAACGCAGAAAATCCTCACGGCTATCCTTT
GCTAATAGGTAATGACGTAACCATTGGCCACAAAGTGATGCTGCACGGCTGCGATATTCACGATCGTGTGTTGGTTGGTA
TGGGGGCGATTGTTTTAGATGCTGTCGTGGTTGAATCGGACGTGATGATTGGTGCGGGCAGTCTAGTACCGCCAGGGAAA
AGATTAGAAAGCGGCTATCTTTATGTTGGTAGCCCAGTAAAACAAGCTCGCCCTCTATCAGAGAAAGAACGAGCTTTTTT
ACTAAAGTCAGCGGACAACTATGTCCAAAACAAGAATGACTATTTAACTGAAGTAAAAGACCTTCATGAAAGATAA

Upstream 100 bases:

>100_bases
TCTTTCGAAGCCTTGCCGTGTCAGCGAGGGGGCATTATAGAGATCGGCGTCACGTTGGCAAGCCCTTTTTCACGTTTTTT
TTGATTTTCCTGTCGTTTGA

Downstream 100 bases:

>100_bases
ACTAATCGATAATGATATGGCCTTCTTCGTTGAAGGCTTCATCTTCTATTAACTCTTCTGCTATTTCTTCCAGATCAAAT
CGGTAATCAATAAAAGCAGC

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFFILKGEFLLLFSHDITIHQALLGGKMSSIRSYKGIHPQIGERVYIDSTSVIVGDIRIGDDSSIWPLVAARGDVNHIHI
GARTNIQDGSVLHVTHKNAENPHGYPLLIGNDVTIGHKVMLHGCDIHDRVLVGMGAIVLDAVVVESDVMIGAGSLVPPGK
RLESGYLYVGSPVKQARPLSEKERAFLLKSADNYVQNKNDYLTEVKDLHER

Sequences:

>Translated_211_residues
MFFILKGEFLLLFSHDITIHQALLGGKMSSIRSYKGIHPQIGERVYIDSTSVIVGDIRIGDDSSIWPLVAARGDVNHIHI
GARTNIQDGSVLHVTHKNAENPHGYPLLIGNDVTIGHKVMLHGCDIHDRVLVGMGAIVLDAVVVESDVMIGAGSLVPPGK
RLESGYLYVGSPVKQARPLSEKERAFLLKSADNYVQNKNDYLTEVKDLHER
>Mature_211_residues
MFFILKGEFLLLFSHDITIHQALLGGKMSSIRSYKGIHPQIGERVYIDSTSVIVGDIRIGDDSSIWPLVAARGDVNHIHI
GARTNIQDGSVLHVTHKNAENPHGYPLLIGNDVTIGHKVMLHGCDIHDRVLVGMGAIVLDAVVVESDVMIGAGSLVPPGK
RLESGYLYVGSPVKQARPLSEKERAFLLKSADNYVQNKNDYLTEVKDLHER

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=174, Percent_Identity=66.6666666666667, Blast_Score=245, Evalue=2e-66,
Organism=Escherichia coli, GI1787667, Length=186, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI87081681, Length=157, Percent_Identity=31.2101910828025, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23179; Mature: 23179

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFILKGEFLLLFSHDITIHQALLGGKMSSIRSYKGIHPQIGERVYIDSTSVIVGDIRIG
CEEEEECCEEEEEECCCEEEHHHHCCCHHHHHHHCCCCCCCCCEEEEECCEEEEEEEEEC
DDSSIWPLVAARGDVNHIHIGARTNIQDGSVLHVTHKNAENPHGYPLLIGNDVTIGHKVM
CCCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEECEEEE
LHGCDIHDRVLVGMGAIVLDAVVVESDVMIGAGSLVPPGKRLESGYLYVGSPVKQARPLS
EECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCHHHCCCCC
EKERAFLLKSADNYVQNKNDYLTEVKDLHER
CHHHEEEEECCCHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFFILKGEFLLLFSHDITIHQALLGGKMSSIRSYKGIHPQIGERVYIDSTSVIVGDIRIG
CEEEEECCEEEEEECCCEEEHHHHCCCHHHHHHHCCCCCCCCCEEEEECCEEEEEEEEEC
DDSSIWPLVAARGDVNHIHIGARTNIQDGSVLHVTHKNAENPHGYPLLIGNDVTIGHKVM
CCCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEECEEEE
LHGCDIHDRVLVGMGAIVLDAVVVESDVMIGAGSLVPPGKRLESGYLYVGSPVKQARPLS
EECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCHHHCCCCC
EKERAFLLKSADNYVQNKNDYLTEVKDLHER
CHHHEEEEECCCHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]