Click here to switch to the map view.

The map label for this gene is 37681395

Identifier: 37681395

GI number: 37681395

Start: 3298657

End: 3299148

Strand: Direct

Name: 37681395

Synonym: VV3211

Alternate gene names: NA

Gene position: 3298657-3299148 (Clockwise)

Preceding gene: 37681394

Following gene: 37681396

Centisome position: 98.34

GC content: 41.06

Gene sequence:

>492_bases
GTGATAAATGACGCTATGGACAGTCTCAATAACATTGATTTCAAAAAACTTGCTAGCCAACAAAAATCTATTCAAATGAA
GATGCGATTGCTCGCATTGGCCCATTTTAAAGATGGTCACTCTCGAACCCAAATTGCTAAGTTCCTTAAGGTAAGCAGAA
CCAGTGTGAATAAATGGGTACAAACCTTCCTTGAAGAAGGGCTTGAAGGACTGCAAGAGAAACCAAGAACGGGTCGCCCA
GCATTTCTTAACGCGGAGCAGCGAGAACAATTAAGTCAGTATATAAAAGCTCGAGCGATGGATTCGTCTGGCGGTCGATT
AACTGGTAACGATATTCATGCTTATATCGTTAATGAATTTGGCAAACACTACCACCCAGATTCGATCTACAACTTGCTCA
ACCATATGGGCTTTTCTTGGATAACTTCACGCTCCAAGCACCCTCGTCAATCCCAGCAAATCCAAGACGATTTTAAAAAA
ATTCAAAATTGA

Upstream 100 bases:

>100_bases
GTACAAACAAAAAGACCCCCAACATCTCTGCTGAGGCCTAGAATAAGTACTAATACCAACCTAACTAAAAATATGATCTA
ATTGAGACTGTTACTTCTTC

Downstream 100 bases:

>100_bases
AACGATCCTTAAGATCCCCAGTCACATGGGGCTTGATAACGTCGATGTCTGGTTTCAAGATGAAGCAAGATTTGGCCAGC
AAAACACGACAACTCGACTT

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MINDAMDSLNNIDFKKLASQQKSIQMKMRLLALAHFKDGHSRTQIAKFLKVSRTSVNKWVQTFLEEGLEGLQEKPRTGRP
AFLNAEQREQLSQYIKARAMDSSGGRLTGNDIHAYIVNEFGKHYHPDSIYNLLNHMGFSWITSRSKHPRQSQQIQDDFKK
IQN

Sequences:

>Translated_163_residues
MINDAMDSLNNIDFKKLASQQKSIQMKMRLLALAHFKDGHSRTQIAKFLKVSRTSVNKWVQTFLEEGLEGLQEKPRTGRP
AFLNAEQREQLSQYIKARAMDSSGGRLTGNDIHAYIVNEFGKHYHPDSIYNLLNHMGFSWITSRSKHPRQSQQIQDDFKK
IQN
>Mature_163_residues
MINDAMDSLNNIDFKKLASQQKSIQMKMRLLALAHFKDGHSRTQIAKFLKVSRTSVNKWVQTFLEEGLEGLQEKPRTGRP
AFLNAEQREQLSQYIKARAMDSSGGRLTGNDIHAYIVNEFGKHYHPDSIYNLLNHMGFSWITSRSKHPRQSQQIQDDFKK
IQN

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.xylinum IS1268 ORFA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18863; Mature: 18863

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINDAMDSLNNIDFKKLASQQKSIQMKMRLLALAHFKDGHSRTQIAKFLKVSRTSVNKWV
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
QTFLEEGLEGLQEKPRTGRPAFLNAEQREQLSQYIKARAMDSSGGRLTGNDIHAYIVNEF
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHH
GKHYHPDSIYNLLNHMGFSWITSRSKHPRQSQQIQDDFKKIQN
HCCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINDAMDSLNNIDFKKLASQQKSIQMKMRLLALAHFKDGHSRTQIAKFLKVSRTSVNKWV
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
QTFLEEGLEGLQEKPRTGRPAFLNAEQREQLSQYIKARAMDSSGGRLTGNDIHAYIVNEF
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHH
GKHYHPDSIYNLLNHMGFSWITSRSKHPRQSQQIQDDFKKIQN
HCCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]