Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is sprT [H]

Identifier: 37681049

GI number: 37681049

Start: 2921670

End: 2922176

Strand: Direct

Name: sprT [H]

Synonym: VV2865

Alternate gene names: 37681049

Gene position: 2921670-2922176 (Clockwise)

Preceding gene: 37681048

Following gene: 37681050

Centisome position: 87.1

GC content: 46.55

Gene sequence:

>507_bases
ATGAAAAAGATCGAGTTTGAGCTGCACTACCAAGCCCAAAAAGCACTGCACGCTTGTATCGATAAAGCCAACCGCTACTT
TCAGCACCAATTTCCAATGCCACTTCTTAGCTATCAATTGAGAGGCAAAGCGGCGGGTAAGGCGTATCTGCAACTCAATC
AAATTCGTCTTAACCCGATTTTGTTCAAAGAGAACAAAACGGCTTTCTTGGAAGAAGTGATTCCTCATGAAGTGGCTCAC
TTGCTCACTTATCAGTTATATGGCCGAGTTAAACCTCATGGCGCAGAATGGCAATCCATCATGCAAGGCGTTTTTCTCTT
GCCCGCCAACACGACACATCAATTTGCTGTCGCTTCCGTGCAAGGAAAAACCTTCCAATATCGCTGCCAATGTCGCGAGT
TTCCGCTAACCATCCGTCGCCACAACAAAGTTCTGCGTAATGAGGCAAGCTATACCTGCCAAAAGTGCCGACAAACCTTG
ATCTTCACCGGCATCCAACTCTCATAG

Upstream 100 bases:

>100_bases
GAAACCATCAAGAAAAAACACCACTAGGGTCTTTGCCCCTAGAAGCATCAACAGATAATGCTATTATTTGCCCTCATCAC
ACTATGAGGGCAAATTTTTG

Downstream 100 bases:

>100_bases
CTTGGCACTCCCCCCCTGTTGCTATTATTAACTTACTTATTACATTGAATAAAATACGCGTGTTAGAATGCTAAAAGTCA
TACTTTTTAAAGACTTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKKIEFELHYQAQKALHACIDKANRYFQHQFPMPLLSYQLRGKAAGKAYLQLNQIRLNPILFKENKTAFLEEVIPHEVAH
LLTYQLYGRVKPHGAEWQSIMQGVFLLPANTTHQFAVASVQGKTFQYRCQCREFPLTIRRHNKVLRNEASYTCQKCRQTL
IFTGIQLS

Sequences:

>Translated_168_residues
MKKIEFELHYQAQKALHACIDKANRYFQHQFPMPLLSYQLRGKAAGKAYLQLNQIRLNPILFKENKTAFLEEVIPHEVAH
LLTYQLYGRVKPHGAEWQSIMQGVFLLPANTTHQFAVASVQGKTFQYRCQCREFPLTIRRHNKVLRNEASYTCQKCRQTL
IFTGIQLS
>Mature_168_residues
MKKIEFELHYQAQKALHACIDKANRYFQHQFPMPLLSYQLRGKAAGKAYLQLNQIRLNPILFKENKTAFLEEVIPHEVAH
LLTYQLYGRVKPHGAEWQSIMQGVFLLPANTTHQFAVASVQGKTFQYRCQCREFPLTIRRHNKVLRNEASYTCQKCRQTL
IFTGIQLS

Specific function: Involved In Bola Gene Expression At The Stationary Phase. [C]

COG id: COG3091

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sprT family [H]

Homologues:

Organism=Escherichia coli, GI1789313, Length=148, Percent_Identity=49.3243243243243, Blast_Score=160, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006640 [H]

Pfam domain/function: PF10263 SprT-like [H]

EC number: NA

Molecular weight: Translated: 19624; Mature: 19624

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIEFELHYQAQKALHACIDKANRYFQHQFPMPLLSYQLRGKAAGKAYLQLNQIRLNPI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEEEECEE
LFKENKTAFLEEVIPHEVAHLLTYQLYGRVKPHGAEWQSIMQGVFLLPANTTHQFAVASV
EEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEEECCCCCCCEEEEEE
QGKTFQYRCQCREFPLTIRRHNKVLRNEASYTCQKCRQTLIFTGIQLS
CCCCEEEEEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKIEFELHYQAQKALHACIDKANRYFQHQFPMPLLSYQLRGKAAGKAYLQLNQIRLNPI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEEEECEE
LFKENKTAFLEEVIPHEVAHLLTYQLYGRVKPHGAEWQSIMQGVFLLPANTTHQFAVASV
EEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEEECCCCCCCEEEEEE
QGKTFQYRCQCREFPLTIRRHNKVLRNEASYTCQKCRQTLIFTGIQLS
CCCCEEEEEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA