Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is sfsA [H]

Identifier: 37680942

GI number: 37680942

Start: 2812151

End: 2812867

Strand: Direct

Name: sfsA [H]

Synonym: VV2758

Alternate gene names: 37680942

Gene position: 2812151-2812867 (Clockwise)

Preceding gene: 37680940

Following gene: 37680943

Centisome position: 83.83

GC content: 45.47

Gene sequence:

>717_bases
ATGCATTTCGAACCCGCGCTAGATTGCGCCCTATTACAAAAACGCTATAAACGCTTTCTCGCCGATGTGACCTATCAAAG
CGGCGATACAGGCACGATTCATTGTGCCAATACCGGCGCCATGACTGGTTGCGCAACCCCTGGTGATAAAGTGTGGTATT
CCACTTCCAACAACACCAAACGAAAATACCCCCACAGTTGGGAAATTACAGAAACGCAGCAGGGTCATCTTATCTGTGTC
AATACCATTCGCGCCAACCAGCTCACGGTGGAAGCCATTGAGCAAGGCTGGATTAAAGAGCTCTCAGGGTATGAGCAACT
TCAAACTGAAGTGAAATATGGTCATGAAAATAGTCGAATTGATATCTTGCTCAGCGCAAGCGACCGACCAGCATGCTATA
TAGAAGTAAAGAGTGTCACCTTGCTAGATGACACCGAGCCTGGACAAGGCTTCTTTCCTGATGCAGTGACCACCCGTGGA
CAAAAACACCTGCGAGAGCTCACAGAAATGGCACAAAATGGAAGTAGAGCCATACTTTTATTTGCTGTTTTACATTCAGG
TATTGAAAAAGTTGCTGCGGCGCTCCATATAGACGCCAAATATTCCCAATTACTCAAACAAGCACAAAAAGCCGGAGTTG
AAGTCCTCTGCTATAAAGCAGAGATCAGCAATACTGAAATCAAACTCAATTCTGCTATTGCGTTTAACAATAGCTAG

Upstream 100 bases:

>100_bases
GTGGCATCACGGCGTGGATAGGCAATTGTGACAATGTTGAGTCCTTATGCTTAAATGGCGGCCATATTGTACATAAAAAC
CCGCTCGTCTAAATAAGCAA

Downstream 100 bases:

>100_bases
AAAAATGATGTGGTCTTCACATTGACGTTAAGTTTACGATTGATAGTTTGCCAGCACCGCCTCTTTCTGCTATAGATACC
CGCCTTAAATTAGCTGCTTA

Product: sugar fermentation stimulation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MHFEPALDCALLQKRYKRFLADVTYQSGDTGTIHCANTGAMTGCATPGDKVWYSTSNNTKRKYPHSWEITETQQGHLICV
NTIRANQLTVEAIEQGWIKELSGYEQLQTEVKYGHENSRIDILLSASDRPACYIEVKSVTLLDDTEPGQGFFPDAVTTRG
QKHLRELTEMAQNGSRAILLFAVLHSGIEKVAAALHIDAKYSQLLKQAQKAGVEVLCYKAEISNTEIKLNSAIAFNNS

Sequences:

>Translated_238_residues
MHFEPALDCALLQKRYKRFLADVTYQSGDTGTIHCANTGAMTGCATPGDKVWYSTSNNTKRKYPHSWEITETQQGHLICV
NTIRANQLTVEAIEQGWIKELSGYEQLQTEVKYGHENSRIDILLSASDRPACYIEVKSVTLLDDTEPGQGFFPDAVTTRG
QKHLRELTEMAQNGSRAILLFAVLHSGIEKVAAALHIDAKYSQLLKQAQKAGVEVLCYKAEISNTEIKLNSAIAFNNS
>Mature_238_residues
MHFEPALDCALLQKRYKRFLADVTYQSGDTGTIHCANTGAMTGCATPGDKVWYSTSNNTKRKYPHSWEITETQQGHLICV
NTIRANQLTVEAIEQGWIKELSGYEQLQTEVKYGHENSRIDILLSASDRPACYIEVKSVTLLDDTEPGQGFFPDAVTTRG
QKHLRELTEMAQNGSRAILLFAVLHSGIEKVAAALHIDAKYSQLLKQAQKAGVEVLCYKAEISNTEIKLNSAIAFNNS

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family [H]

Homologues:

Organism=Escherichia coli, GI1786340, Length=233, Percent_Identity=61.8025751072961, Blast_Score=299, Evalue=1e-82,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005224 [H]

Pfam domain/function: PF03749 SfsA [H]

EC number: NA

Molecular weight: Translated: 26438; Mature: 26438

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFEPALDCALLQKRYKRFLADVTYQSGDTGTIHCANTGAMTGCATPGDKVWYSTSNNTK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCC
RKYPHSWEITETQQGHLICVNTIRANQLTVEAIEQGWIKELSGYEQLQTEVKYGHENSRI
CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEE
DILLSASDRPACYIEVKSVTLLDDTEPGQGFFPDAVTTRGQKHLRELTEMAQNGSRAILL
EEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEHH
FAVLHSGIEKVAAALHIDAKYSQLLKQAQKAGVEVLCYKAEISNTEIKLNSAIAFNNS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEEEEEECCC
>Mature Secondary Structure
MHFEPALDCALLQKRYKRFLADVTYQSGDTGTIHCANTGAMTGCATPGDKVWYSTSNNTK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCC
RKYPHSWEITETQQGHLICVNTIRANQLTVEAIEQGWIKELSGYEQLQTEVKYGHENSRI
CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEE
DILLSASDRPACYIEVKSVTLLDDTEPGQGFFPDAVTTRGQKHLRELTEMAQNGSRAILL
EEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEHH
FAVLHSGIEKVAAALHIDAKYSQLLKQAQKAGVEVLCYKAEISNTEIKLNSAIAFNNS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA