| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37680090
Identifier: 37680090
GI number: 37680090
Start: 1905584
End: 1905727
Strand: Direct
Name: 37680090
Synonym: VV1905
Alternate gene names: NA
Gene position: 1905584-1905727 (Clockwise)
Preceding gene: 37680061
Following gene: 37680104
Centisome position: 56.81
GC content: 41.67
Gene sequence:
>144_bases TTGGCCGATAAAACTCAAAAACCTAAGATAAAATTGCTGATTGGGCAAGCTACCCTAACCTCGCGCTTACCTGAAAATTG CTTGAGGCAATTTTCTGAATTTTCAGCACCAAAGAGTAAGTGTCCGAAAAACAGCGCCCAATGA
Upstream 100 bases:
>100_bases TTTTACCAAAACCAAGATTAACTCGGCTAAGATTGGCTAACAAAAGACAAAACGTAGAAAACCGAAATGGCTCATAGTTT TGAAAATGGGACTTTGAAAT
Downstream 100 bases:
>100_bases AGTCAACTTGCCGACAAGCACAAAACCAATCAGCCAAGGGAACAAAGAAAAACCATAAGCCACTGATTTTAATTGATTAA GCCTAACGCCCGCTTAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MADKTQKPKIKLLIGQATLTSRLPENCLRQFSEFSAPKSKCPKNSAQ
Sequences:
>Translated_47_residues MADKTQKPKIKLLIGQATLTSRLPENCLRQFSEFSAPKSKCPKNSAQ >Mature_46_residues ADKTQKPKIKLLIGQATLTSRLPENCLRQFSEFSAPKSKCPKNSAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5234; Mature: 5103
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKTQKPKIKLLIGQATLTSRLPENCLRQFSEFSAPKSKCPKNSAQ CCCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ADKTQKPKIKLLIGQATLTSRLPENCLRQFSEFSAPKSKCPKNSAQ CCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA