| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679920
Identifier: 37679920
GI number: 37679920
Start: 1788930
End: 1791122
Strand: Direct
Name: 37679920
Synonym: VV1736
Alternate gene names: NA
Gene position: 1788930-1791122 (Clockwise)
Preceding gene: 37679919
Following gene: 37679922
Centisome position: 53.33
GC content: 39.63
Gene sequence:
>2193_bases ATGCATGAACTTGCCATCATAATAAAAATATTTCTTGTTTTTAGTTTAATCAATACACTATTCAATAGTAGTAGTGATAA AGAAGCAGCCTTAAAAGAGCGTCGGACTAAGTTGCTAAGTGTGAAGCGTGATGCAAACCTTTCTGAAGAAGAGCGTTCCG CCCTCTCAGAGTTATATGGCTTTGATGTCGGATATTCTGAGGTTTATTACATCACTGAACCTTTTGAGGTTCATGTAATT CCAGATGATGAAGGAAAAACGAAATTCCTCGCTTTGGCAGATTATCCGGTAGCAATATCCGATAAAGCGATATACTTCCT TGATACTGAGGATCAACTTGCTGAAGTCGTTGTGGTTGCCGAGACAATTCTAGTCCTTCGTCTTAACGATTACTATATTG TCGATGAAATCAATAATACTCTTGCAAATGCGCCATCACTCTTCTCTAAGGGAGCTGAAGCATATGCGCCAAGCACAACA CAACCTGTAGAGCAAGGTATGGGGCCAGCAACGCACCCTGCCCCTCAAACCGTGCTAAAGTCTGAACGACCCGCCACCCA AACAGAAGTTTTGTATCTATCACCTCCCTTTTACAATTTTTCCGTACCGCTAATTATAGTAGTGGCTACGAGTATTTTTG CGTACATCAGCAAGATTGATATTGCCATTGAACCTGTATGGCTTGCTCCAGTAGTTCTGCTTACGGTAACTGTTATTGCA CTACTGATACTTTTTTTAAAGACAAAGCCAAAATATGAACCTAGCAATATAGTGATAACGCGATATTTCGGCAAAATAGA GTCTTTAGATAGCTCTGATCGAAAAACTTGGCTGACATTCACTGAACCAAACGGGAAAACAAAAAAGGCTTGGATGCCAA GCCATTGGCAAAATACGGTGAGTATTAATAAAAATGTATACTTTGAAATTGAACAGAATCAATCGACCGTTGTGCGAATA GGTTTAAACGAAATTTCAGAACGAGATTTTGCGAAAAGAAAACCACAATATCTTACTGCTGCGGTGGGATTACTCTGCGC TAGTTTAATCATCGCTTTCAACACAAAATTGGAATGGCGCGATGCCGCTTTTACCATGCTTAAAAATAGCGCATCCTATC AAATTAACACCTTTCAAGATTGGGCATCGAGCGATTTGAAAGTTGGCGATCATTTATTAATCAATCAACCCCGTTTGTGT TTAGATAGCTTTTCAAAAGATAATGCGCTTCTCTATTGCAACGCATTTAAATATGCGTTGACGGATGAAGACTTTCAAGT GGTTCCTAATACTGAGTTGGTCGAAGAGTATAAAGATTTTATCAGCAATGAGCCAGATTATACCCCCGACGTTTCAGAAG GAGACTACATGTTGATGATGCTGGCTTTTGAAGTAAAAAAGTCGTATTCAGTCGATAATTTAGTCATGTATAGGCGAAGT GAGTTAGCGATATTTACTGTAAAGAGCTTAATGGAAATCGCTAATCATTTAACGAAATACTGCCCAACTGATGCAAAGAG TGAGGGTGTTAAAACGGATAATACATTAGCTACAGGAAGCTCAACTAGAAGTACAGATTCATTGGCTGCAGATTGTTTAG CGTTCAAACAAGAGTTTTCAGTATTATGGCGAGAGGCAACAAAAAGCCACTGTACCGACAACTGTTGGGACGAAGCATTA CAAGGTGGCGAGTTTGCGAATGAAAAGTTACTTAAAAATAGTGATAGCCTTAAAAATTATCAAGGTAAATTACATAACCT GAGAAGTACAATATGGCGAAACAATCATGCTTCATTGAAGTTACCAACCCCAAAGCAAAATATTCTTTCTATTCAGTGGA TGGGTCCAACGAGTGCTGATTTGCAAGAAATAGCCATAATGAGAGCAAATCCAGATCCTGTCCATGACGATGTTAAAATA GAGACATTGAATAGGTTAATCCAAATGCAGGCTGAAGTTGCTTATCAACGCGTTGATGCAACTATCTTGAAGGCAGTGAA TAACGACGAAGGGCAACTTACGCTCATTTTGGCTCCCCGCATCAGCTCTAACCAAGCGATGGAGACAGTCATCAATCATT CATTTATGGCATTGTTTGGTCTAACGATGTTGCTCCTACTCATTATGTATTGGCTTAGTAGCAGACCCCATAACAAGAGG CGAGTTAAATCGGAAAATGCCTGGATTAGCTAG
Upstream 100 bases:
>100_bases ATGGATGTTGATTAACACGGAAATTGCATATTTGCTTCTATCATTGGTTGAAAACTGTAAAGACAACAAATGATCAACAT AAAAAGGACTTTATATTTAC
Downstream 100 bases:
>100_bases CTGTAATAATCCAGACTTAATCTGGCAGTCCTTCATATCTCTTGATATGAATCATATTGCTCAAGTGGTATGCCCATATT TATGACACGCTTTGATGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYGFDVGYSEVYYITEPFEVHVI PDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVAETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTT QPVEQGMGPATHPAPQTVLKSERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTVSINKNVYFEIEQNQSTVVRI GLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWRDAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLC LDSFSKDNALLYCNAFKYALTDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFSVLWREATKSHCTDNCWDEAL QGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLKLPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKI ETLNRLIQMQAEVAYQRVDATILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR RVKSENAWIS
Sequences:
>Translated_730_residues MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYGFDVGYSEVYYITEPFEVHVI PDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVAETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTT QPVEQGMGPATHPAPQTVLKSERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTVSINKNVYFEIEQNQSTVVRI GLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWRDAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLC LDSFSKDNALLYCNAFKYALTDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFSVLWREATKSHCTDNCWDEAL QGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLKLPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKI ETLNRLIQMQAEVAYQRVDATILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR RVKSENAWIS >Mature_730_residues MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYGFDVGYSEVYYITEPFEVHVI PDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVAETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTT QPVEQGMGPATHPAPQTVLKSERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTVSINKNVYFEIEQNQSTVVRI GLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWRDAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLC LDSFSKDNALLYCNAFKYALTDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFSVLWREATKSHCTDNCWDEAL QGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLKLPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKI ETLNRLIQMQAEVAYQRVDATILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR RVKSENAWIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82535; Mature: 82535
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYG CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC FDVGYSEVYYITEPFEVHVIPDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVA CCCCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCEEECCCEEEEECCHHHHHHHHHHH ETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTTQPVEQGMGPATHPAPQTVLK HEEEEEEECCEEEEECHHHHHCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHC SERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTV HHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEE SINKNVYFEIEQNQSTVVRIGLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWR EECCEEEEEEECCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH DAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLCLDSFSKDNALLYCNAFKYAL HHHHHHHHCCCCEEEECHHHHCCCCCCCCCEEEECCCHHHHHCCCCCCEEEEEECEEEEE TDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS CCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCEEEEECC ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFS CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHH VLWREATKSHCTDNCWDEALQGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLK HHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEE LPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKIETLNRLIQMQAEVAYQRVDA ECCCCCCEEEEEECCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR HHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RVKSENAWIS HCCCCCCCCC >Mature Secondary Structure MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYG CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC FDVGYSEVYYITEPFEVHVIPDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVA CCCCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCEEECCCEEEEECCHHHHHHHHHHH ETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTTQPVEQGMGPATHPAPQTVLK HEEEEEEECCEEEEECHHHHHCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHC SERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTV HHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEE SINKNVYFEIEQNQSTVVRIGLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWR EECCEEEEEEECCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH DAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLCLDSFSKDNALLYCNAFKYAL HHHHHHHHCCCCEEEECHHHHCCCCCCCCCEEEECCCHHHHHCCCCCCEEEEEECEEEEE TDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS CCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCEEEEECC ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFS CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHH VLWREATKSHCTDNCWDEALQGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLK HHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEE LPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKIETLNRLIQMQAEVAYQRVDA ECCCCCCEEEEEECCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR HHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RVKSENAWIS HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA