| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is modB [H]
Identifier: 37679898
GI number: 37679898
Start: 1770717
End: 1771415
Strand: Direct
Name: modB [H]
Synonym: VV1714
Alternate gene names: 37679898
Gene position: 1770717-1771415 (Clockwise)
Preceding gene: 37679897
Following gene: 37679899
Centisome position: 52.79
GC content: 49.21
Gene sequence:
>699_bases ATGAGCCTTTGGCAAACAACACAAGAGGCTTTTGCCTTACTGTTTAGCTTAGACAAAGAACTATGGGAGATCGTTGCGGT CTCCTTTAGCGTTTCTCTTACCGCCATATTGTTGGTGCTGTTGCCTGCGACTTTTTTGTCTTTTCTCCTCGCCTACACCA ATTTTCGCGGCAAGTGGTTGTTGGTTTCATTTGTGAACACGTTGCAATCGGTACCCACGGTGGTGATTGGTTTGCTGCTT TACATGTTCCTCTCGCGATCCGGTCCGCTCGGTGACTGGCAGATGCTGTTCACGCAAAAAGCGATGATCCTCGGGCAAAT GCTGATTTGCTTTCCTGTGTTGGTTTCGATGATGTATGGCGCGTTGCAATCGAGCGATCGCCGCGCGTTAGAAACCGCAT TAACCCTTGGAGTGTCTCTGCCAAGATTAAGCGCGACGATGATTTGGGAAACCCGTTTTCCTCTTATGGCGGCTACCATT ACCGGTTTTTCTCGAATTGTGACCGAAGTGGGTTGTTCGATGATGGTGGGTGGAAACATTATGGGTTTGACGCGAAACAT CCCCACCGCGATTTCAATGGAGAGCCACAAGGGCGCTTTTGCTCAAGGGGTTGCGCTTGGTATTGTGCTACTCACCTTAG CACTCGTGTTGAACTTTTTGCTGTCGAGTATGCGTGGCAAAGGCTATTTGCGAACTTAG
Upstream 100 bases:
>100_bases TGACTGGTTGGTCAATCCTCGTGGACAAGAGCTGATCAACAGCTTCCGCTTAAATGGCAAGCAACTGTTTGTGGCAAATG CAGATCAGAAGTAGTCATCA
Downstream 100 bases:
>100_bases GAAGTGATATGACGATTAAAATTACCGCTCGAGATCTTTCCATGCGCTTTAAAGAGCGAGTGCTGTTTCACATTCCTCAA CTTCAAATCGGCCCGAACGA
Product: ABC-type tungstate transport system, periplasmic component
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSLWQTTQEAFALLFSLDKELWEIVAVSFSVSLTAILLVLLPATFLSFLLAYTNFRGKWLLVSFVNTLQSVPTVVIGLLL YMFLSRSGPLGDWQMLFTQKAMILGQMLICFPVLVSMMYGALQSSDRRALETALTLGVSLPRLSATMIWETRFPLMAATI TGFSRIVTEVGCSMMVGGNIMGLTRNIPTAISMESHKGAFAQGVALGIVLLTLALVLNFLLSSMRGKGYLRT
Sequences:
>Translated_232_residues MSLWQTTQEAFALLFSLDKELWEIVAVSFSVSLTAILLVLLPATFLSFLLAYTNFRGKWLLVSFVNTLQSVPTVVIGLLL YMFLSRSGPLGDWQMLFTQKAMILGQMLICFPVLVSMMYGALQSSDRRALETALTLGVSLPRLSATMIWETRFPLMAATI TGFSRIVTEVGCSMMVGGNIMGLTRNIPTAISMESHKGAFAQGVALGIVLLTLALVLNFLLSSMRGKGYLRT >Mature_231_residues SLWQTTQEAFALLFSLDKELWEIVAVSFSVSLTAILLVLLPATFLSFLLAYTNFRGKWLLVSFVNTLQSVPTVVIGLLLY MFLSRSGPLGDWQMLFTQKAMILGQMLICFPVLVSMMYGALQSSDRRALETALTLGVSLPRLSATMIWETRFPLMAATIT GFSRIVTEVGCSMMVGGNIMGLTRNIPTAISMESHKGAFAQGVALGIVLLTLALVLNFLLSSMRGKGYLRT
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4662
COG function: function code H; ABC-type tungstate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=208, Percent_Identity=30.2884615384615, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI87082099, Length=221, Percent_Identity=25.7918552036199, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25464; Mature: 25333
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLWQTTQEAFALLFSLDKELWEIVAVSFSVSLTAILLVLLPATFLSFLLAYTNFRGKWL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVSFVNTLQSVPTVVIGLLLYMFLSRSGPLGDWQMLFTQKAMILGQMLICFPVLVSMMYG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALQSSDRRALETALTLGVSLPRLSATMIWETRFPLMAATITGFSRIVTEVGCSMMVGGNI HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHEECCCE MGLTRNIPTAISMESHKGAFAQGVALGIVLLTLALVLNFLLSSMRGKGYLRT EEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLWQTTQEAFALLFSLDKELWEIVAVSFSVSLTAILLVLLPATFLSFLLAYTNFRGKWL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVSFVNTLQSVPTVVIGLLLYMFLSRSGPLGDWQMLFTQKAMILGQMLICFPVLVSMMYG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALQSSDRRALETALTLGVSLPRLSATMIWETRFPLMAATITGFSRIVTEVGCSMMVGGNI HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHEECCCE MGLTRNIPTAISMESHKGAFAQGVALGIVLLTLALVLNFLLSSMRGKGYLRT EEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]