Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679880

Identifier: 37679880

GI number: 37679880

Start: 1747503

End: 1749023

Strand: Direct

Name: 37679880

Synonym: VV1696

Alternate gene names: NA

Gene position: 1747503-1749023 (Clockwise)

Preceding gene: 37679879

Following gene: 37679890

Centisome position: 52.09

GC content: 42.41

Gene sequence:

>1521_bases
GTGAATAAACATATTTTGTTTTGGTCTTTATCGTTATCCCTTCTTCCTACTTATGCGTATTCTAACAACTGTAAAGTCGA
TGGTTATACTATTGGTTTTTTTAATGGTGTAGCCACGTCACGAAGGGACGCAAAACTAGGGTTAAGTAAAATAATAAATA
CTCTTGCCATCCAACAATATCGAGGTCAACCGGTTGAATACGCTCTGTTCTACAACGACTCCAATTACAAAGAAAGGGGG
ATTGATGTACTAGCCGACTTTGCTGAGACATTCGATCAACGAACTAACGAGCTGGAGCAAAAGCAGTTTGAGCGATGGGA
AGCTTTTTGGGATGTCGTAAGCGGTAGAAATAACAGCCCAATCATTAAAAAAATTGACTCACTAGTAAAAGGTTTCCTTG
CCTTCGTGAATGATACCTTAAGCCGAGGTATCAACGAGATTATTCATGAGTTTTTGGAAGGTTTGGCGTCTTTGGCGGGG
AGTGATATCAACACTGACGAGGTTCGAATGAAACATCGTCTTCGTAATGACTCACAGACTTGGCAAGGTAAAAAACTGAT
TTATTTGGCCCATTCACAGGGCAACCTTTGGGTAAATGAGTCATTCCATTATGTCAATCAGCGTTTGGGCTATGATGAAA
CGAATATTAAAGTTATCCATATTGCCCCCGCTTCTCCGACGCTTAACGGGGACTACATTCTATCGGACAAAGATCATGTC
ATAAACGGATTGAACTTTACTGGAATTGGTTCAGTACCGTTTCCAAACATAAGTATCCCGACAAGCGATAAAGATAGTTT
GGGACATGGATTGGTGGAAATATATCTTACCAATCAACAAACCAAACAGATGATCAAAGACGCGGTAGACAAAGCGCTGG
ATAGCGTCAAATCTCCAGCGATGGAAGATTACTTATTTGATATTCGCTTCGAATACTCAGAAAACTACTTGAAAGCGCAT
CGTCCACCGAAAATTGCCTTTGTCGACAGTTTAGAAAGCAGGGACTATTGTGGCTTATCGAACGTAGATTATTTTTTCGA
TTTCTATGGTGCATGTGGTAACTACTATCGAGCGGTTGAAGATGCTGGTAGTCCTTATATCACTAGTGAGAGAGAACTTG
TTGTCTCCAAGAAGAATCCTGTACTTATTCCGCTCACCATACCTGATGGCCAACAGCCGTATCACCTTCAAGTGCAAGAA
TGCCTTGCTATTCCGCCAGCGGGATCTTTTCTGTTGGGTGAAATTGCAGGCATTTACGATCTTGAAGCGCCCTTCGATCT
TACCGCTAAACTCGTGGTTACCGATCGATTTGGACGAGAGTATGATATTGATGACAGAGATGTCAGCCCGCACATAGAAG
GTGGGTACCTTAAGTGTGCTGGTACCGGGTCTTTCAGTGAACTGGTAGCGATACAATCTGGGTATAGCGATGATGAAAAA
CGGTACCTTAAGACCGAGCAGCTTACTGGTACGTATGAGTTGAGTGCCCAAAAAATCTGGCATCATTGCGGAGGACATTG
A

Upstream 100 bases:

>100_bases
TTGACCTACAATACGAAAAAGAGAACGTTAGCGTTCTTGTCTTACAATCGATTGTTAAATGGTAGTACATCAGTAATGTT
AGCCCCAGAGGCAACGTATT

Downstream 100 bases:

>100_bases
AAAAATCCCCTCAGTTGAGGGGATTTTGCTATTTCTCTGTTTGCTCTTTTCTATAAGTTTGGGCCCGTCGATGGTCTATG
CGGTTGATTGTTGCTTAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQYRGQPVEYALFYNDSNYKERG
IDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSPIIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAG
SDINTDEVRMKHRLRNDSQTWQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV
INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPAMEDYLFDIRFEYSENYLKAH
RPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVEDAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQE
CLAIPPAGSFLLGEIAGIYDLEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK
RYLKTEQLTGTYELSAQKIWHHCGGH

Sequences:

>Translated_506_residues
MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQYRGQPVEYALFYNDSNYKERG
IDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSPIIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAG
SDINTDEVRMKHRLRNDSQTWQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV
INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPAMEDYLFDIRFEYSENYLKAH
RPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVEDAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQE
CLAIPPAGSFLLGEIAGIYDLEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK
RYLKTEQLTGTYELSAQKIWHHCGGH
>Mature_506_residues
MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQYRGQPVEYALFYNDSNYKERG
IDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSPIIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAG
SDINTDEVRMKHRLRNDSQTWQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV
INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPAMEDYLFDIRFEYSENYLKAH
RPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVEDAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQE
CLAIPPAGSFLLGEIAGIYDLEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK
RYLKTEQLTGTYELSAQKIWHHCGGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57161; Mature: 57161

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQY
CCCEEEEEEEEEEHEEEEEECCCCEECEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
RGQPVEYALFYNDSNYKERGIDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSP
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAGSDINTDEVRMKHRLRNDSQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
WQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV
CCCCEEEEEEECCCCEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCCHHH
INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
MEDYLFDIRFEYSENYLKAHRPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVE
HHHEEEEEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQECLAIPPAGSFLLGEIAGIYD
HCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEHHHHHCCCCCCCHHHHHHCCEEE
LEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHH
RYLKTEQLTGTYELSAQKIWHHCGGH
HHHHHHHCCCEEEHHHHHHHHHCCCC
>Mature Secondary Structure
MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQY
CCCEEEEEEEEEEHEEEEEECCCCEECEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
RGQPVEYALFYNDSNYKERGIDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSP
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAGSDINTDEVRMKHRLRNDSQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
WQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV
CCCCEEEEEEECCCCEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCCHHH
INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
MEDYLFDIRFEYSENYLKAHRPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVE
HHHEEEEEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQECLAIPPAGSFLLGEIAGIYD
HCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEHHHHHCCCCCCCHHHHHHCCEEE
LEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHH
RYLKTEQLTGTYELSAQKIWHHCGGH
HHHHHHHCCCEEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA